prot_H-paniculata_contig267.7296.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig267.7296.1
Unique Name	prot_H-paniculata_contig267.7296.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	263

Homology

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BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot
Match: D8LRQ7_ECTSI (DnaJ Cysteine-Rich Domain-Containing Protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ7_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 2.020e-56
Identity = 104/183 (56.83%), Postives = 122/183 (66.67%), Query Frame = 0

Query:   79 DRQQGSQSRAKHGGGSCTCKPRAMPP-LDNSRLSRSSRDRNERYGSSSAAGAAGPLRAIDPDAIYTANDWIAGIAGGSVGVMGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAQCCCSGKFMTKLPGADSTTVLPXXXXXXXXXXXXXXXRGDGRAVPRELDRKTADAAEVDLRLEEIGMSNM 260
            D  +G++ R K    +C   PR++PP L N              GSS       PLRAI+ D +++AN+WIAG+AGGSVGV+GTLIQLELKQEKLKTRRNCPYCDGSGKLVCA C  +G F  KLPG+D+ + LP               RGDGRAVPRELDRKTADAAEVDLRLEEIGM  +
Sbjct:   68 DAARGAEPRGKR---TCRTAPRSLPPPLGN--------------GSSQRDRTIAPLRAINQDTLFSANEWIAGVAGGSVGVLGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAVCFSAGTFTVKLPGSDTYSTLPCPGCAGNKYITCLNCRGDGRAVPRELDRKTADAAEVDLRLEEIGMGGI 233

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BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot
Match: A0A835YW14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW14_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.190e-13
Identity = 58/117 (49.57%), Postives = 74/117 (63.25%), Query Frame = 0

Query:  133 LRAIDPDAIYTANDWIAGIAGGSVGVMGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAQCCCSGKFMTKL--PGADSTTVLPXXXXXXXXXXXXXXXRGDGRAVPRELDRKTADAAE 247
            LRA+DP  I   N+ ++G AGG+VGVMGTLI LELK++ +  R  CPYC G+G L CA+C   G  + +    GA +   +P   XXXXXXXXXXXX  DG +VP  L+ K A   E
Sbjct:   68 LRALDPAYIDAVNELMSGFAGGTVGVMGTLIGLELKKQNVVKRSVCPYCQGAGTLTCARCYGVGILLARRRSDGAAAPLSVPCGCXXXXXXXXXXXXXXDGASVPPLLEYKGAGGYE 184

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BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot
Match: A0A835YP24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP24_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.740e-13
Identity = 44/109 (40.37%), Postives = 59/109 (54.13%), Query Frame = 0

Query:  149 AGIAGGSVGVMGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAQCCCSGKFMTKLPGADSTTVLPXXXXXXXXXXXXXXXRGDGRAVPRELDRKTADAAEVDLRLEEIGM 257
            AGI GGSVGV+GTL+ +E K+  ++    C YC GSG LVC QC  +G+        + +  L                +GDGR+VP  L+RKT+   E +L  EEIGM
Sbjct:   19 AGILGGSVGVIGTLLGIEWKKYNVRQASECCYCRGSGHLVCGQCLGTGELTLVNAVTNKSISLGCPTCSGMTYITCINCKGDGRSVPNFLNRKTSRDPEDEL--EEIGM 125

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BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot
Match: A0A7R9U8V3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8V3_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 3.890e-11
Identity = 56/127 (44.09%), Postives = 77/127 (60.63%), Query Frame = 0

Query:  132 PLRAIDPDAIYTANDWIAGIAGGSVGVMGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAQCCCSGKFMTKLPGADSTTVLPXXXXXXXXXXXXXXXRGDGRAVPRELDRKTADAAEVDLRLEEIGMS 258
            P   ++   + TA D     AGG+VGVMG+L+ +E+++ + + R  CPYC G+G+L CA C  +GK          T V+ XXXXXXXXXXXXXXX    R VP  LDR+ +   E +L  EEIG++
Sbjct:   32 PTMTLEGLVVNTAGDVACAFAGGTVGVMGSLVAIEIRKLQQRKRNACPYCVGTGRLTCAVCWGAGKVEIAGAQGSQTVVVDXXXXXXXXXXXXXXXXXXXRLVPLMLDRRASRDPEDEL--EEIGLA 156

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BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot
Match: A0A2V3J075_9FLOR (Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J075_9FLOR)

HSP 1 Score: 67.0 bits (162), Expect = 6.560e-10
Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query:  143 TANDWIAGIAGGSVGVMGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAQC 192
            T  +  A IAGG+VGVMGT+I LEL+++++K R+ CPYC G+GKL CA C
Sbjct:   65 TVTEITAAIAGGTVGVMGTIITLELQRQRVKHRKQCPYCRGTGKLPCASC 114

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BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot
Match: R7QE93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE93_CHOCR)

HSP 1 Score: 67.8 bits (164), Expect = 8.010e-10
Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query:  143 TANDWIAGIAGGSVGVMGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAQC 192
            T N+  A IAGG+VGVMGT+I LE++++++K R+ CPYC G+GKL CA C
Sbjct:  119 TINEITAAIAGGTVGVMGTIITLEVRRQQVKERKQCPYCRGNGKLPCATC 168

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BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot
Match: M1UXZ1_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UXZ1_CYAM1)

HSP 1 Score: 64.7 bits (156), Expect = 5.150e-9
Identity = 36/101 (35.64%), Postives = 47/101 (46.53%), Query Frame = 0

Query:  149 AGIAGGSVGVMGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAQCCCSGKFMTKLPGADSTTVLPXXXXXXXXXXXXXXXRGDGRAVPRELDRKTADAAEVD 249
            +  AGGS+GV+GTL+ LEL Q + + R  CPYC G GKLVC QC   G    +    D T  +P                G GR    E++R      E +
Sbjct:   89 SAFAGGSIGVLGTLLTLELAQTRARERMQCPYCSGRGKLVCGQCLALGTLPNR-KSPDGT--VPCRLCGRSGYVPCNHCEGTGRLFQEEVERAALQTYEQE 186

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BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot
Match: A0A7S1TK16_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TK16_9RHOD)

HSP 1 Score: 57.4 bits (137), Expect = 9.270e-7
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0

Query:  149 AGIAGGSVGVMGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAQCCCSGKFMTKLPGADS 207
            A  AGG+VGVMG+LI  EL+Q + K  + CPYC G+G+L C +C   G+ +    GA +
Sbjct:   28 AAFAGGTVGVMGSLIAWELRQLRDKESKQCPYCLGTGRLRCGRCLGQGELLISEVGAQA 86

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BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot
Match: M2Y0D2_GALSU (Chaperone protein / DnaJ-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y0D2_GALSU)

HSP 1 Score: 56.2 bits (134), Expect = 3.230e-6
Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0

Query:  121 YGSSSAAGAAGPLRAIDPDAIYTANDWIAGIAGGSVGVMGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAQC 192
            Y S S A  +  L  I P    T N+  + +AGG+VGVMGTL+ LE+ +++++  R CPYC G  KL C  C
Sbjct:   31 YYSRSIAHRSWTLTMIPP----TVNEVTSALAGGTVGVMGTLLVLEVIRQRIEEMRQCPYCRGLRKLPCGLC 98

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BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot
Match: A0A7R9UFV6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFV6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 8.390e-6
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0

Query:  148 IAGIAGGSVGVMGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAQC 192
            IAG+ GGS+GV+GTL+  E ++ K+  R  CPYC GSG L CA C
Sbjct:   73 IAGLLGGSIGVIGTLVYYEKRRFKMLERVLCPYCQGSGFLTCAVC 117

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig267.7296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
D8LRQ7_ECTSI	2.020e-56	56.83	DnaJ Cysteine-Rich Domain-Containing Protein n=2 T...	[more]
A0A835YW14_9STRA	1.190e-13	49.57	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YP24_9STRA	3.740e-13	40.37	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7R9U8V3_9STRA	3.890e-11	44.09	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A2V3J075_9FLOR	6.560e-10	58.00	Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracila...	[more]
R7QE93_CHOCR	8.010e-10	58.00	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]
M1UXZ1_CYAM1	5.150e-9	35.64	Uncharacterized protein n=1 Tax=Cyanidioschyzon me...	[more]
A0A7S1TK16_9RHOD	9.270e-7	45.76	Hypothetical protein n=1 Tax=Erythrolobus australi...	[more]
M2Y0D2_GALSU	3.230e-6	43.06	Chaperone protein / DnaJ-related protein n=1 Tax=G...	[more]
A0A7R9UFV6_9STRA	8.390e-6	55.56	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..21
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..262
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.757
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 170..233

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig267	contig	H-paniculata_contig267:8767..13046 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig267.7296.1	mRNA_H-paniculata_contig267.7296.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig267 7776..13068 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig267.7296.1 ID=prot_H-paniculata_contig267.7296.1|Name=mRNA_H-paniculata_contig267.7296.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MDILLFIATLLFSCCPAVSKASWVRGVGKQQGVSRVVASSNHRKSNNNSQ
RLGHKPHDGSLASFVEGLCGQRRSGGGPDRQQGSQSRAKHGGGSCTCKPR
AMPPLDNSRLSRSSRDRNERYGSSSAAGAAGPLRAIDPDAIYTANDWIAG
IAGGSVGVMGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAQCCCSGKFMT
KLPGADSTTVLPCPGCSGSKYVECLNCRGDGRAVPRELDRKTADAAEVDL
RLEEIGMSNMTR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036410	HSP_DnaJ_Cys-rich_dom_sf