prot_H-paniculata_contig26682.7290.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26682.7290.1
Unique Nameprot_H-paniculata_contig26682.7290.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length149
Homology
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BLAST of mRNA_H-paniculata_contig26682.7290.1 vs. uniprot
Match: A0A2Z7D0Y8_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7D0Y8_9LAMI)

HSP 1 Score: 49.3 bits (116), Expect = 5.960e-5
Identity = 26/72 (36.11%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:   18 ELTRVRKDFENLAVQQNETPNEFLARSFVIVERMKEIGVDMTETNVHHQMVRSLPDRFAIAEHMMLVKKDLS 89
            +L  +R++FE L++Q NE+  +FL+R+  +V RMK  G ++ +  V  +++RSL  RF      +   KDLS
Sbjct:    3 KLQSLRREFETLSMQSNESVQDFLSRTKAVVNRMKSYGENINDGTVVAKILRSLTPRFDHVVAAIEESKDLS 74
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BLAST of mRNA_H-paniculata_contig26682.7290.1 vs. uniprot
Match: A0A2H9ZYF2_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZYF2_9ASPA)

HSP 1 Score: 52.0 bits (123), Expect = 7.230e-5
Identity = 30/96 (31.25%), Postives = 51/96 (53.12%), Query Frame = 0 
Query:    3 AWNIFEDWFRDTT---SGELTRVRKDFENLAVQQNETPNEFLARSFVIVERMKEIGVDMTETNVHHQMVRSLPDRFAIAEHMMLVKKDLSRKDLEE 95
            AW I E  ++ T    +  L  +R+DFENL +  +E+  EF +R   +V++++ +G  + E  V  +++RSLP +F      +   KDL    L E
Sbjct:   11 AWTILETEYQGTNKVITVNLQNLRRDFENLVMNDSESVQEFSSRVNAVVKKIRTLGEILPEQKVVEKVLRSLPPKFNFVVAAIEESKDLRTYSLNE 106
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26682.7290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2Z7D0Y8_9LAMI5.960e-536.11Uncharacterized protein n=1 Tax=Dorcoceras hygrome... [more]
A0A2H9ZYF2_9ASPA7.230e-531.25Retrovirus-related Pol polyprotein from transposon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 3..83
e-value: 1.1E-9
score: 38.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26682contigH-paniculata_contig26682:296..742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26682.7290.1mRNA_H-paniculata_contig26682.7290.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26682 296..742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26682.7290.1 ID=prot_H-paniculata_contig26682.7290.1|Name=mRNA_H-paniculata_contig26682.7290.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
SGAWNIFEDWFRDTTSGELTRVRKDFENLAVQQNETPNEFLARSFVIVER
MKEIGVDMTETNVHHQMVRSLPDRFAIAEHMMLVKKDLSRKDLEEGVRTA
KLEMDLEDEPGKGGNGHALFAAAAVSGGGNRGKHQQHQQRQQQQPWHRQ
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