prot_H-paniculata_contig266.7263.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig266.7263.1
Unique Nameprot_H-paniculata_contig266.7263.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length124
Homology
BLAST of mRNA_H-paniculata_contig266.7263.1 vs. uniprot
Match: A0A6H5KD24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD24_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 3.230e-65
Identity = 93/122 (76.23%), Postives = 110/122 (90.16%), Query Frame = 0
Query:    1 MAEEKIDRTKVCPLLLRCFWQQQRHRRGDEFSNPKNLPLDELQIYTWPDASIREITGLIQGVIPAAKRRNGRLSFAFVYPDSQGKQVVRQVASVMSMRPGADDAKTLKELKFQTGDFMDVAI 122
            MA+ KIDRTKVCPLLLRCFW Q RH RG+++SN  +LP DELQIYTWPDA++REIT LIQGV+PAA+RR GRLS+AFVYPDSQGKQV+RQVASV S++PG DD KTL++LKFQTGD+M+VAI
Sbjct:    1 MADGKIDRTKVCPLLLRCFWTQNRHGRGEDYSNVNSLPRDELQIYTWPDATVREITTLIQGVVPAARRRQGRLSYAFVYPDSQGKQVLRQVASVFSVKPGQDDNKTLRDLKFQTGDYMEVAI 122          
BLAST of mRNA_H-paniculata_contig266.7263.1 vs. uniprot
Match: D7FKB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKB0_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 2.130e-63
Identity = 93/122 (76.23%), Postives = 109/122 (89.34%), Query Frame = 0
Query:    1 MAEEKIDRTKVCPLLLRCFWQQQRHRRGDEFSNPKNLPLDELQIYTWPDASIREITGLIQGVIPAAKRRNGRLSFAFVYPDSQGKQVVRQVASVMSMRPGADDAKTLKELKFQTGDFMDVAI 122
            MA+ KIDRTKVCPLLLRCFW Q RHRRG+++SN  +LP DELQIYTWPDA++REIT LIQGV+PAA+RR GRLS+AFVYPDSQGKQV+RQVASV S+  G DD KTL++LKFQTGD+M+VAI
Sbjct:   87 MADVKIDRTKVCPLLLRCFWTQNRHRRGEDYSNVNSLPRDELQIYTWPDATVREITTLIQGVVPAARRRQGRLSYAFVYPDSQGKQVLRQVASVFSVTQGQDDNKTLRDLKFQTGDYMEVAI 208          
BLAST of mRNA_H-paniculata_contig266.7263.1 vs. uniprot
Match: A0A835YTK7_9STRA (Sin3 associated polypeptide p18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK7_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.770e-46
Identity = 70/119 (58.82%), Postives = 87/119 (73.11%), Query Frame = 0
Query:    4 EKIDRTKVCPLLLRCFWQQQRHRRGDEFSNPKNLPLDELQIYTWPDASIREITGLIQGVIPAAKRRNGRLSFAFVYPDSQGKQVVRQVASVMSMRPGADDAKTLKELKFQTGDFMDVAI 122
            EK+DRTK CP LLRCF +   H R D F   ++LP DELQIYTW DA++RE+T L+QGV    +RRN RL F+FVYPD  GK V+R+V SV S R G  D  TLKEL+FQTGD++D+A+
Sbjct:    3 EKVDRTKACPFLLRCFLRPNSHNRPDSFQREESLPRDELQIYTWTDATLREVTSLVQGVHDLPRRRNARLEFSFVYPDKMGKMVMREVGSVHSSRKGPSDDATLKELRFQTGDYIDIAV 121          
BLAST of mRNA_H-paniculata_contig266.7263.1 vs. uniprot
Match: A0A7S2XY13_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY13_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.590e-43
Identity = 71/122 (58.20%), Postives = 92/122 (75.41%), Query Frame = 0
Query:    4 EKIDRTKVCPLLLRCFWQQQRHRRGDEFS--NPKNLPLDELQIYTWPDASIREITGLIQGVIPAAKRRNGRLSFAFVYPDSQGKQVVRQVASVMSMRPGADDAKTLKELKFQTGDFMDVAIF 123
            + IDR KVCPLLLRCFW+   H R ++F+  N   +P+DE+QIYTW DAS+RE+T LI+ V PAA+RR  RL+FAFVYPD +G+ V+++V  V S R    D KTL+ L+FQTGDF+DVAIF
Sbjct:   10 DAIDRDKVCPLLLRCFWKVGAHHRVEDFAEANQGIVPMDEVQIYTWADASLRELTDLIKEVNPAARRRTARLNFAFVYPDKRGRNVLKEVGIVYSNRRSDADDKTLRALRFQTGDFLDVAIF 131          
BLAST of mRNA_H-paniculata_contig266.7263.1 vs. uniprot
Match: D8TL43_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TL43_VOLCA)

HSP 1 Score: 144 bits (363), Expect = 4.010e-42
Identity = 67/120 (55.83%), Postives = 93/120 (77.50%), Query Frame = 0
Query:    4 EKIDRTKVCPLLLRCFWQQQRHRRGDEFSNPKNLPLDELQIYTWPDASIREITGLIQGVIPAAKRRNGRLSFAFVYPDSQGKQVVRQVASVMSMRPGADDAKTLKELKFQTGDFMDVAIF 123
            E+IDR K CPLL+R F +Q  H + +EF++  +LP +E+ IYTW DA +RE++ L++ V PAA+ RN R+SFAFVYPD +G+ V+RQV  V S RPG DDAKTL++L FQTGD++DV+I+
Sbjct:   12 EEIDREKTCPLLIRVFPRQGGHHKLEEFADRNSLP-EEIAIYTWMDADLRELSDLVKDVQPAARNRNARISFAFVYPDRRGRNVMRQVGVVHSTRPGEDDAKTLRQLNFQTGDYLDVSIY 130          
BLAST of mRNA_H-paniculata_contig266.7263.1 vs. uniprot
Match: A0A8J4D0D5_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4D0D5_9CHLO)

HSP 1 Score: 143 bits (360), Expect = 4.470e-41
Identity = 67/120 (55.83%), Postives = 93/120 (77.50%), Query Frame = 0
Query:    4 EKIDRTKVCPLLLRCFWQQQRHRRGDEFSNPKNLPLDELQIYTWPDASIREITGLIQGVIPAAKRRNGRLSFAFVYPDSQGKQVVRQVASVMSMRPGADDAKTLKELKFQTGDFMDVAIF 123
            E+I+R K CPLL+R F +Q  H + +EF++  +LP DE+ IYTW DA +RE++ LI+ V PAA+ RN R+SFAFVYPD +G+ V+RQV  V S RPG DD+KTL++L FQTGD++DV+I+
Sbjct:   57 EEINREKTCPLLMRVFPRQGGHHKLEEFADRNSLP-DEIAIYTWMDADLRELSDLIKDVQPAARNRNARISFAFVYPDRRGRNVMRQVGVVHSTRPGEDDSKTLRQLNFQTGDYLDVSIY 175          
BLAST of mRNA_H-paniculata_contig266.7263.1 vs. uniprot
Match: A0A5J4XKE9_9CHLO (Histone deacetylase complex subunit SAP18 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XKE9_9CHLO)

HSP 1 Score: 140 bits (352), Expect = 3.570e-39
Identity = 69/122 (56.56%), Postives = 90/122 (73.77%), Query Frame = 0
Query:    3 EEKIDRTKVCPLLLRCFWQQQRHRRGDEFSNPKNLPLDELQIYTWPDASIREITGLIQGVIPAAKRRNGRLSFAFVYPDSQGKQVVRQVASVMSMRPGA-DDAKTLKELKFQTGDFMDVAIF 123
            E +IDR KVCPLLLR F +Q  H + +E+      P  E+QIYTW DA++RE+T L++ V PAAKR N RL FAFVYPD +G+ V+RQV + +S +PG  DD K+LK+L FQTGDF+DVAI+
Sbjct:  110 EPQIDREKVCPLLLRVFTKQGGHHQLEEYRVRNQEPKSEVQIYTWADATLRELTDLVKEVQPAAKRINARLEFAFVYPDKRGRNVMRQVGASISGKPGMEDDRKSLKQLNFQTGDFLDVAIY 231          
BLAST of mRNA_H-paniculata_contig266.7263.1 vs. uniprot
Match: E1ZL16_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZL16_CHLVA)

HSP 1 Score: 137 bits (344), Expect = 4.330e-39
Identity = 68/121 (56.20%), Postives = 88/121 (72.73%), Query Frame = 0
Query:    3 EEKIDRTKVCPLLLRCFWQQQRHRRGDEFSNPKNLPLDELQIYTWPDASIREITGLIQGVIPAAKRRNGRLSFAFVYPDSQGKQVVRQVASVMSMRPGADDAKTLKELKFQTGDFMDVAIF 123
            E  IDR KVCPLLLR F +   H + ++F+   + P DE+QIYTW DA++RE+  L++ V PAA+R   RLSFAFVYPD +GK V+RQV  V S R G DD+K+LK+L FQTGDF+ VAI+
Sbjct:   21 EPAIDREKVCPLLLRVFPRLGAHHQLEDFARRGDEPKDEVQIYTWMDATLRELCDLVKEVQPAARRPMARLSFAFVYPDRRGKNVMRQVGLVHSTRLGEDDSKSLKQLNFQTGDFLSVAIY 141          
BLAST of mRNA_H-paniculata_contig266.7263.1 vs. uniprot
Match: A0A2P6U3M4_CHLSO (Histone deacetylase complex subunit SAP18 isoform A n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3M4_CHLSO)

HSP 1 Score: 137 bits (346), Expect = 8.160e-39
Identity = 65/121 (53.72%), Postives = 90/121 (74.38%), Query Frame = 0
Query:    3 EEKIDRTKVCPLLLRCFWQQQRHRRGDEFSNPKNLPLDELQIYTWPDASIREITGLIQGVIPAAKRRNGRLSFAFVYPDSQGKQVVRQVASVMSMRPGADDAKTLKELKFQTGDFMDVAIF 123
            E  IDR KVCPLLLR F +   H + ++F+   + P DE+Q+YTW DA++RE++ L++ V PAA+R   R+SFAF+YPD +GK V+RQV +V + R G DD+KTLK+L FQTGDF+ VAI+
Sbjct:   66 EPAIDREKVCPLLLRVFPRLGAHHQLEDFARRGDEPKDEVQVYTWMDATLRELSDLVKEVQPAARRPMARISFAFIYPDRRGKNVMRQVGAVHATRLGEDDSKTLKQLNFQTGDFLSVAIY 186          
BLAST of mRNA_H-paniculata_contig266.7263.1 vs. uniprot
Match: A0A2K3DCK4_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DCK4_CHLRE)

HSP 1 Score: 136 bits (343), Expect = 1.260e-38
Identity = 64/119 (53.78%), Postives = 88/119 (73.95%), Query Frame = 0
Query:    5 KIDRTKVCPLLLRCFWQQQRHRRGDEFSNPKNLPLDELQIYTWPDASIREITGLIQGVIPAAKRRNGRLSFAFVYPDSQGKQVVRQVASVMSMRPGADDAKTLKELKFQTGDFMDVAIF 123
            +IDR K CPLL+R F +Q  H + ++F++   LP DE+ IYTW DA +RE++ LI+   PAA+ RN R+SFAFVYPD +G+ V+RQV  V + RPG DD KTL+ L FQTGD++DV+I+
Sbjct:   48 EIDREKTCPLLMRVFPKQGGHHKLEDFTDRAKLP-DEIAIYTWMDADLRELSDLIKEANPAARARNARMSFAFVYPDRKGRNVMRQVGVVHATRPGEDDTKTLRSLNFQTGDYLDVSIY 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig266.7263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD24_9PHAE3.230e-6576.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKB0_ECTSI2.130e-6376.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTK7_9STRA1.770e-4658.82Sin3 associated polypeptide p18 n=1 Tax=Tribonema ... [more]
A0A7S2XY13_9STRA2.590e-4358.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8TL43_VOLCA4.010e-4255.83Uncharacterized protein (Fragment) n=1 Tax=Volvox ... [more]
A0A8J4D0D5_9CHLO4.470e-4155.83Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
A0A5J4XKE9_9CHLO3.570e-3956.56Histone deacetylase complex subunit SAP18 n=1 Tax=... [more]
E1ZL16_CHLVA4.330e-3956.20Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A2P6U3M4_CHLSO8.160e-3953.72Histone deacetylase complex subunit SAP18 isoform ... [more]
A0A2K3DCK4_CHLRE1.260e-3853.78Uncharacterized protein n=4 Tax=Chlamydomonas TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042534Sin3 associated polypeptide p18 superfamilyGENE3D3.10.20.550coord: 1..123
e-value: 6.5E-43
score: 147.8
IPR010516Sin3 associated polypeptide p18PFAMPF06487SAP18coord: 5..122
e-value: 2.8E-35
score: 121.5
IPR010516Sin3 associated polypeptide p18PANTHERPTHR13082SAP18coord: 3..122
NoneNo IPR availablePANTHERPTHR13082:SF0HISTONE DEACETYLASE COMPLEX SUBUNIT SAP18coord: 3..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig266contigH-paniculata_contig266:6346..10198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig266.7263.1mRNA_H-paniculata_contig266.7263.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig266 6309..11523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig266.7263.1 ID=prot_H-paniculata_contig266.7263.1|Name=mRNA_H-paniculata_contig266.7263.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MAEEKIDRTKVCPLLLRCFWQQQRHRRGDEFSNPKNLPLDELQIYTWPDA
SIREITGLIQGVIPAAKRRNGRLSFAFVYPDSQGKQVVRQVASVMSMRPG
ADDAKTLKELKFQTGDFMDVAIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042534SAP18_sf
IPR010516SAP18