prot_H-paniculata_contig26481.7228.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26481.7228.1
Unique Nameprot_H-paniculata_contig26481.7228.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length71
Homology
BLAST of mRNA_H-paniculata_contig26481.7228.1 vs. uniprot
Match: A0A6H5L2C7_9PHAE (Bms1-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2C7_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.400e-33
Identity = 61/71 (85.92%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    1 METFEFLTILQVHGFPKVMGVLTYLDKFDDVKALRVTKKKLKPRFWTEVYSGAKVFGMGGDINGKYHKTEV 71
            METFEFL ILQVHGFPKVM VLT+LD+FD+VKALR TKKKLK RFWTEVY+GAKVFGMGG+INGKY KTEV
Sbjct:  159 METFEFLNILQVHGFPKVMCVLTHLDRFDNVKALRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEV 229          
BLAST of mRNA_H-paniculata_contig26481.7228.1 vs. uniprot
Match: UPI0000452A59 (hypothetical protein n=1 Tax=Cryptosporidium hominis (strain TU502) TaxID=353151 RepID=UPI0000452A59)

HSP 1 Score: 109 bits (272), Expect = 4.290e-29
Identity = 50/71 (70.42%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    1 METFEFLTILQVHGFPKVMGVLTYLDKFDDVKALRVTKKKLKPRFWTEVYSGAKVFGMGGDINGKYHKTEV 71
            METFEFL ILQVHGFP+V+GVLT+LDK +D K LR TKKKLK RFWTE+Y+GAK+F + G  NG Y+KTE+
Sbjct:   26 METFEFLNILQVHGFPRVLGVLTHLDKIEDNKTLRKTKKKLKNRFWTEIYNGAKLFYLSGIHNGFYNKTEI 96          
BLAST of mRNA_H-paniculata_contig26481.7228.1 vs. uniprot
Match: A0A392NWD7_9FABA (Ribosome biogenesis protein BMS1 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NWD7_9FABA)

HSP 1 Score: 109 bits (273), Expect = 5.000e-29
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    1 METFEFLTILQVHGFPKVMGVLTYLDKFDDVKALRVTKKKLKPRFWTEVYSGAKVFGMGGDINGKYHKTEV 71
            METFEFL ILQVHGFPKVMGVLT+LD F DVK LR TK++LK RFWTE+Y GAK+F + G I+GKY K EV
Sbjct:   23 METFEFLNILQVHGFPKVMGVLTHLDHFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREV 93          
BLAST of mRNA_H-paniculata_contig26481.7228.1 vs. uniprot
Match: A0A438CYI2_VITVI (Ribosome biogenesis protein BMS1-like n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CYI2_VITVI)

HSP 1 Score: 109 bits (272), Expect = 1.070e-28
Identity = 50/71 (70.42%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    1 METFEFLTILQVHGFPKVMGVLTYLDKFDDVKALRVTKKKLKPRFWTEVYSGAKVFGMGGDINGKYHKTEV 71
            METFEFL ILQVHGFPKVMGVLT+LDKF D K L+ TK++LK RFWTE+Y GAK+F + G I+GKY K E+
Sbjct:   14 METFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYPKREI 84          
BLAST of mRNA_H-paniculata_contig26481.7228.1 vs. uniprot
Match: D8QXE0_SELML (Bms1-type G domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QXE0_SELML)

HSP 1 Score: 115 bits (287), Expect = 3.250e-28
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 METFEFLTILQVHGFPKVMGVLTYLDKFDDVKALRVTKKKLKPRFWTEVYSGAKVFGMGGDINGKYHKTEV 71
            METFEFL +LQVHGFPKVMGVLT+LDKF DVKALR TKK+LK RFWTE+Y GAK+F + G I+GKY K E+
Sbjct:  161 METFEFLNLLQVHGFPKVMGVLTHLDKFKDVKALRKTKKQLKSRFWTEIYDGAKLFYLSGLIHGKYSKREI 231          
BLAST of mRNA_H-paniculata_contig26481.7228.1 vs. uniprot
Match: UPI00053F4B98 (ribosome biogenesis protein BMS1 homolog isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F4B98)

HSP 1 Score: 114 bits (284), Expect = 8.260e-28
Identity = 51/71 (71.83%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 METFEFLTILQVHGFPKVMGVLTYLDKFDDVKALRVTKKKLKPRFWTEVYSGAKVFGMGGDINGKYHKTEV 71
            METFEFL I+QVHGFP+VMGVLT+LDKF DVK LR TK++LK RFWTE+Y GAK+F + G I+GKYHK E+
Sbjct:  162 METFEFLNIMQVHGFPRVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYHKREI 232          
BLAST of mRNA_H-paniculata_contig26481.7228.1 vs. uniprot
Match: A0A6A4NMH7_LUPAL (Putative P-loop containing nucleoside triphosphate hydrolase, bms1/Tsr1-type G n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A4NMH7_LUPAL)

HSP 1 Score: 110 bits (276), Expect = 1.550e-27
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    1 METFEFLTILQVHGFPKVMGVLTYLDKFDDVKALRVTKKKLKPRFWTEVYSGAKVFGMGGDINGKYHKTEV 71
            METFEFL ILQVHGFPKVMGVLT+LD+F D K LR TK++LK RFWTE+Y GAK+F + G INGKY K EV
Sbjct:  166 METFEFLNILQVHGFPKVMGVLTHLDQFKDAKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLINGKYVKREV 236          
BLAST of mRNA_H-paniculata_contig26481.7228.1 vs. uniprot
Match: A0A2N9I842_FAGSY (Bms1-type G domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I842_FAGSY)

HSP 1 Score: 109 bits (272), Expect = 2.920e-27
Identity = 50/71 (70.42%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    1 METFEFLTILQVHGFPKVMGVLTYLDKFDDVKALRVTKKKLKPRFWTEVYSGAKVFGMGGDINGKYHKTEV 71
            METFEFL ILQVHGFPKVMGVLT+LDKF D K L+ TK++LK RFWTE+Y GAK+F + G I+GKY K E+
Sbjct:   78 METFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYAKREI 148          
BLAST of mRNA_H-paniculata_contig26481.7228.1 vs. uniprot
Match: A0A6J0P078_RAPSA (ribosome biogenesis protein BMS1 homolog n=2 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0P078_RAPSA)

HSP 1 Score: 112 bits (279), Expect = 3.910e-27
Identity = 52/71 (73.24%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 METFEFLTILQVHGFPKVMGVLTYLDKFDDVKALRVTKKKLKPRFWTEVYSGAKVFGMGGDINGKYHKTEV 71
            METFEFL I+QVHGFPKVMGVLT+LDKF+DVK LR TKK+LK RFWTE+Y GAK+F + G I+GKY + EV
Sbjct:  164 METFEFLNIMQVHGFPKVMGVLTHLDKFNDVKKLRKTKKRLKHRFWTEIYDGAKLFYLSGLIHGKYLELEV 234          
BLAST of mRNA_H-paniculata_contig26481.7228.1 vs. uniprot
Match: V7AF61_PHAVU (Bms1-type G domain-containing protein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7AF61_PHAVU)

HSP 1 Score: 112 bits (279), Expect = 3.910e-27
Identity = 53/71 (74.65%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    1 METFEFLTILQVHGFPKVMGVLTYLDKFDDVKALRVTKKKLKPRFWTEVYSGAKVFGMGGDINGKYHKTEV 71
            METFEFL ILQVHGFPKVMGVLT+LDKF DVK LR TK++LK RFWTE+Y GAK+F + G I+GKY K EV
Sbjct:  165 METFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREV 235          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26481.7228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2C7_9PHAE2.400e-3385.92Bms1-type G domain-containing protein n=2 Tax=Ecto... [more]
UPI0000452A594.290e-2970.42hypothetical protein n=1 Tax=Cryptosporidium homin... [more]
A0A392NWD7_9FABA5.000e-2973.24Ribosome biogenesis protein BMS1 (Fragment) n=1 Ta... [more]
A0A438CYI2_VITVI1.070e-2870.42Ribosome biogenesis protein BMS1-like n=2 Tax=Viti... [more]
D8QXE0_SELML3.250e-2874.65Bms1-type G domain-containing protein n=4 Tax=Sela... [more]
UPI00053F4B988.260e-2871.83ribosome biogenesis protein BMS1 homolog isoform X... [more]
A0A6A4NMH7_LUPAL1.550e-2773.24Putative P-loop containing nucleoside triphosphate... [more]
A0A2N9I842_FAGSY2.920e-2770.42Bms1-type G domain-containing protein n=1 Tax=Fagu... [more]
A0A6J0P078_RAPSA3.910e-2773.24ribosome biogenesis protein BMS1 homolog n=2 Tax=R... [more]
V7AF61_PHAVU3.910e-2774.65Bms1-type G domain-containing protein n=1 Tax=Phas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039761Ribosome biogenesis protein Bms1/Tsr1PANTHERPTHR12858RIBOSOME BIOGENESIS PROTEINcoord: 1..71
NoneNo IPR availablePANTHERPTHR12858:SF2RIBOSOME BIOGENESIS PROTEIN BMS1 HOMOLOGcoord: 1..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26481contigH-paniculata_contig26481:3032..3244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26481.7228.1mRNA_H-paniculata_contig26481.7228.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26481 3017..3244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26481.7228.1 ID=prot_H-paniculata_contig26481.7228.1|Name=mRNA_H-paniculata_contig26481.7228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp
METFEFLTILQVHGFPKVMGVLTYLDKFDDVKALRVTKKKLKPRFWTEVY
SGAKVFGMGGDINGKYHKTEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039761Bms1/Tsr1