prot_H-paniculata_contig2647.7224.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2647.7224.1
Unique Nameprot_H-paniculata_contig2647.7224.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1137
Homology
BLAST of mRNA_H-paniculata_contig2647.7224.1 vs. uniprot
Match: D8LDJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ6_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 6.700e-9
Identity = 79/283 (27.92%), Postives = 101/283 (35.69%), Query Frame = 0
Query:  727 SWWSSGIVALFLTIAVGLGVMCATGRKLPHWVPYFGNDINEGW-VSLDATIRSYRSRAGSLLDE----------EYSDLPGLISDEWPSPAATAAEPTGDSYRYPREIGSATNGSKRKNDADNDN---VIW-RAPSESKSPDQLVFDPVLGVVPYGVLAAWEKARPPRRRPTLRGVGETDSYFEREGSGVSDDYGGGDECPSRSSAAAVVREAFVEPATKAAGNTGFGFAEQRCNSTSSPPAELKKWRQGTGTAEVAAAAGTKKRSLPPVRGTPEWHAWQAAL 994
            SW +   + L   + +G  +       +PHW+P+FG D  + W + LD+ I   RSRAGS              + SDLP LISD                     E G   NG +     D+D    ++W R P   K  D LVF PVLGVVP GV+ AW                                  GGD C       A    A V       G  G G     C+S SS P           +  +A A   K + LPP     EW  W A +
Sbjct:  436 SWRAFACILLLSALVLGTFLR----GSIPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPDLISDS--------------------EEGEDGNGDQGVVPGDDDGETPLMWDRRP---KPDDYLVFHPVLGVVPAGVVRAW----------------------------------GGDGCGGWGGVRAEAAGARVGGTNGGTGGKGCG-----CSSKSSSPRSALA-PAAVSSKAIAVAGVVKGKQLPP----DEWPEWLAMM 647          
BLAST of mRNA_H-paniculata_contig2647.7224.1 vs. uniprot
Match: A0A6H5LRF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRF5_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 9.900e-9
Identity = 82/295 (27.80%), Postives = 108/295 (36.61%), Query Frame = 0
Query:  727 SWWSSGIVALFLTIAVGLGVMCATGRKLPHWVPYFGNDINEGWVS-LDATIRSYRSRAGSLLDE----------EYSDLPGLISDEWPSPAATAAEPTGDSYRYPREIGSATNGSKRKNDADNDNVIW-RAPSESKSPDQLVFDPVLGVVPYGVLAAWEKARPPRRRPTLRGVGETDSYFEREGSGVSDDYGGGDECPSRSSAAAVVREAFVEPATKAAGNTGFGFAEQRCNSTSSPPAELKKWRQGTGTAEVAAAAGTKK-RSLPPVRGTPEWHAWQAALRTNGSSSLFLSSAG 1008
            SW S    A  L ++  LG+       +PHW+P+FG    + W   LD+ I   RSRAGS              + SDLPGLISD                     E G+ T G    +D     ++W R P   K  D L+F PVLGVVP GV+ AW                                  GGD C       A       E A   AG T  G   + C  +S   +          +++  A  G  K + LPP     EW  W AA R   ++++    AG
Sbjct:  430 SWPSWRTFACILLLSA-LGLSTFLRGSMPHWLPFFGGGRRQRWAKDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPGLISDSEEG-----------------EDGNDTQGVVPGDDDGEAPLMWDRRP---KPDDYLIFHPVLGVVPAGVVRAW----------------------------------GGDGCGGWGGVRA-------EAAGARAGGTNGGTXGKGCGCSSKSSSPRGARAPAAMSSKATAVGGVVKGKQLPP----DEWPEWLAARRATAAAAVADVEAG 658          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2647.7224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDJ6_ECTSI6.700e-927.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LRF5_9PHAE9.900e-927.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 750..1136
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 728..749
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..727
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.828
NoneNo IPR availableTMHMMTMhelixcoord: 13..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2647contigH-paniculata_contig2647:2931..9572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2647.7224.1mRNA_H-paniculata_contig2647.7224.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2647 2400..10095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2647.7224.1 ID=prot_H-paniculata_contig2647.7224.1|Name=mRNA_H-paniculata_contig2647.7224.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1137bp
MTRRTQRQRARRRLLCICVLLYSLAALAESRLDVESAIDSQVAKQSGAAG
ESPSPPRQMTCAAPSNDQELVDKGIITNIYSCPIMNIVEQSPPSSNADNS
DSSKDFVSAAIRWKNPSTNGGQELAGPDKGDYPAALMWSSSGSAVSTVAL
AEAESRVEQLGGGLGMQEEAVARPSSPSMDLIYGDSQREEAVLGKIEESE
GEGGGGERDGESAVAKLATPSSVTKRSATTCGAFFFTWDLDAAEDYGRAP
TTLPSGERSSALSPGPSAKVSADNGICYWGSGGIESFGQCSVTGDFEDDP
PLSIYHDGAIEQFLAPGATQSGVAGRLSEEAERHGDTVIAQAQSTVLTVS
DDSRGKERSGSEDEREATPDTMSDSAEARDTIEAFGSENPMVETSPRWEA
TESADVERELSFARPWSAMEPTVLDDADAVTIEAQEDTKRYPAAIAPEDQ
SDVAEILEARVDPSEGMSAAVTTTFAWDEVGEGDSVTAAASDRLLPPLSE
EGDLAGDNGEGEPAIELWSRGFLGCTSNDPKVDCRSSMEQESGERDAKTA
ITTTEPKDNRCEEVLPVVVPPVAGSPDIRGPRMTAVGVAIRNTGLDVHDV
SLVWDRDGVEHQLPSLIIEVEGDRVDAERVAASPPDRKVPVTVSEDTAAA
ILEGQANLGVASPRRVPPKQKEVEKPEATAEQCLDRSNSDGYDSSRGRGE
REMQRIARLPSPAVKVRKRSLPRVASSWWSSGIVALFLTIAVGLGVMCAT
GRKLPHWVPYFGNDINEGWVSLDATIRSYRSRAGSLLDEEYSDLPGLISD
EWPSPAATAAEPTGDSYRYPREIGSATNGSKRKNDADNDNVIWRAPSESK
SPDQLVFDPVLGVVPYGVLAAWEKARPPRRRPTLRGVGETDSYFEREGSG
VSDDYGGGDECPSRSSAAAVVREAFVEPATKAAGNTGFGFAEQRCNSTSS
PPAELKKWRQGTGTAEVAAAAGTKKRSLPPVRGTPEWHAWQAALRTNGSS
SLFLSSAGSGCRGNDGKRPAESSSSRQRPSASTGKGRAVGTGGAVVDGGC
CGEAAVRATVIVENGIGNHGKVSTPAVIALRGDGDGDDHSGTCSFGNIEA
DGGRVGSKSFSFIKGEGDGSGGGSSSGGGGSGGSES*
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