prot_H-paniculata_contig11119.721.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11119.721.1
Unique Nameprot_H-paniculata_contig11119.721.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length246
Homology
BLAST of mRNA_H-paniculata_contig11119.721.1 vs. uniprot
Match: D7FVM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM6_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 4.360e-39
Identity = 92/196 (46.94%), Postives = 111/196 (56.63%), Query Frame = 0
Query:   67 DHVDQLQQP----------IRPPHLFSLPAPGGDICLVVDENGCYHAVRESFPPLGMPVSESGIVDTEVNVIEDMLFGTRFYLSDGTIRGRLCPGG-TAGPLL-RLARF------------LRTITPL---------------SWARQFGRPNGAKASIQNGRPDDTLEVLPVKIHTDGSLIIMLPPAESVDAGSG 223
            D +D+LQQP          + PPHLF +PAPGGD+CLVVDE   Y+A+R+ FPP G+PVS++G+VD++V+ I D LFGTRF L DGT+RG  CPGG TAGPLL RLAR              R+I  L               SWA  F  P+   A   N R   TLEVL V    DGSL + LP   SV A  G
Sbjct:   68 DQLDKLQQPRHHGNECSGPVPPPHLFRIPAPGGDVCLVVDEKKNYYAMRDCFPPFGVPVSQTGVVDSQVDAIGDSLFGTRFNLKDGTVRGPWCPGGGTAGPLLLRLARHRRHRLFNQCIGVARSINRLTHHLFSISKQRRARGSWATYFRPPSSPNA---NERTTTTLEVLTVTEQPDGSLTVALPRCPSVLAPGG 260          
BLAST of mRNA_H-paniculata_contig11119.721.1 vs. uniprot
Match: A0A6H5JUG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG0_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.050e-37
Identity = 91/207 (43.96%), Postives = 114/207 (55.07%), Query Frame = 0
Query:   62 EYRLVDHVDQLQ---------------QPIRPPHLFSLPAPGGDICLVVDENGCYHAVRESFPPLGMPVSESGIVDTEVNVIEDMLFGTRFYLSDGTIRGRLCPGG-TAGPLLR-LARF------------LRTITPL---------------SWARQFGRPNGAKASIQNGRPDDTLEVLPVKIHTDGSLIIMLPPAESVDAGSGS 224
            +Y LV+  DQL+               +P+ PPHLF +PAPGGD+CLVVDEN  Y+A+R+ FPP G+PVS++G+VD++V+ I D LFGTRF L DGT+RG  CPGG TAGPLL  LAR              R+I  L               SWA  F RP  +   I+      TLEVL V    DGSL + LP   S  A  G+
Sbjct:   59 QYTLVESTDQLEXXXXXXXXXXGNEWFEPVPPPHLFRIPAPGGDVCLVVDENKSYYAMRDCFPPFGVPVSQTGVVDSQVDAIGDSLFGTRFNLEDGTVRGPWCPGGGTAGPLLLWLARHRRHRLFTLRIGVARSINHLTHHLFLFSKQRRARGSWATSF-RPPSSPNFIEK-TTTTTLEVLTVTEQLDGSLTVALPRCSSALAPGGN 263          
BLAST of mRNA_H-paniculata_contig11119.721.1 vs. uniprot
Match: A0A836CM18_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM18_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.050e-25
Identity = 58/95 (61.05%), Postives = 70/95 (73.68%), Query Frame = 0
Query:   68 HVDQLQQPIR---PPHLFSLPAPGGDICLVVDENGCYHAVRESFPPLGMPVSESGIVDTEVNVIEDMLFGTRFYLSDGTIRGRLCPGGTAGPLLR 159
            H DQL  P+    PP +FS+P   G +CLVVDENG  HA+R+S PPLG P+S +G+VD+E+ VIED+ FGTRFYLS G  RGRLCPGGTA   LR
Sbjct:  658 HKDQLA-PLGAPPPPLVFSIPVLCGTVCLVVDENGKSHAMRDSCPPLGSPISATGVVDSEIGVIEDLRFGTRFYLSSGAPRGRLCPGGTAPRALR 751          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11119.721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVM6_ECTSI4.360e-3946.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUG0_9PHAE1.050e-3743.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CM18_9STRA2.050e-2561.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11119contigH-paniculata_contig11119:2258..3797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11119.721.1mRNA_H-paniculata_contig11119.721.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11119 1989..3818 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11119.721.1 ID=prot_H-paniculata_contig11119.721.1|Name=mRNA_H-paniculata_contig11119.721.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=246bp
MRTRSRFVLRCFPGGKLLIPFFLLCFSLLPNYDNAFSFPPLIILTSNNNH
RRCSTLRSHHHEYRLVDHVDQLQQPIRPPHLFSLPAPGGDICLVVDENGC
YHAVRESFPPLGMPVSESGIVDTEVNVIEDMLFGTRFYLSDGTIRGRLCP
GGTAGPLLRLARFLRTITPLSWARQFGRPNGAKASIQNGRPDDTLEVLPV
KIHTDGSLIIMLPPAESVDAGSGSTTPGTAAPFSVERCGLAGYDY*
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