mRNA_H-paniculata_contig26334.7194.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig26334.7194.1 vs. uniprot
Match: D8LC66_ECTSI (WD repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC66_ECTSI) HSP 1 Score: 135 bits (339), Expect = 1.410e-34 Identity = 74/98 (75.51%), Postives = 83/98 (84.69%), Query Frame = 1
Query: 28 LLAAPIWSCEESRDVAAIALAEASIGDYKLKSSPDYEVPEEMQLNVSKKQREMVLLEESLHTMRSRFNRRFLALRNIKREILVTVASGNRRLREIDAE 321
L A P ++ RDV AIALA +++GDYKLKSSPDYEVPEEMQLNV KKQREMVLLE+SLH MRSRFN RFLALR IK+EIL TV++ NRRLREIDAE
Sbjct: 1288 LKAKPAEDADDPRDVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHAMRSRFNSRFLALRTIKQEILSTVSADNRRLREIDAE 1385
BLAST of mRNA_H-paniculata_contig26334.7194.1 vs. uniprot
Match: A0A6H5KI67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI67_9PHAE) HSP 1 Score: 134 bits (337), Expect = 2.530e-34 Identity = 74/98 (75.51%), Postives = 83/98 (84.69%), Query Frame = 1
Query: 28 LLAAPIWSCEESRDVAAIALAEASIGDYKLKSSPDYEVPEEMQLNVSKKQREMVLLEESLHTMRSRFNRRFLALRNIKREILVTVASGNRRLREIDAE 321
L A P ++ RDV AIALA +++GDYKLKSS DYEVPEEMQLNV KKQREMVLLE+SLHTMRSRFN RFLALR IKREIL TV++ NRRLR+IDAE
Sbjct: 75 LKAKPAEDADDPRDVEAIALANSNMGDYKLKSSTDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLRQIDAE 172
BLAST of mRNA_H-paniculata_contig26334.7194.1 vs. uniprot
Match: A0A7S2C7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C7U9_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 5.160e-22 Identity = 45/83 (54.22%), Postives = 69/83 (83.13%), Query Frame = 1
Query: 55 EESRDVAAIALAEASIGDYKLKSSPDYEVPEEMQLNVSKKQREMVLLEESLHTMRSRFNRRFLALRNIKREILVTVASGNRRL 303
++ D+AAIA AE ++GDYKLK +PDYEVPE+ +N KK+R+MVLLEE++ +++RFN+RFLALR++KR+I +++ S N+R+
Sbjct: 79 DDPADLAAIAYAENNMGDYKLKMAPDYEVPEDQAVNSEKKRRQMVLLEENMLNIKTRFNKRFLALRDLKRQIALSIISSNKRV 161
BLAST of mRNA_H-paniculata_contig26334.7194.1 vs. uniprot
Match: A0A7S3HTC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTC7_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 6.480e-22 Identity = 50/89 (56.18%), Postives = 69/89 (77.53%), Query Frame = 1
Query: 55 EESRDVAAIALAEASIGDYKLKSSPDYEVPEEMQLNVSKKQREMVLLEESLHTMRSRFNRRFLALRNIKREILVTVASGNRRLREIDAE 321
++ RD+ AI LAE +IGDYKLK + DYEVPE+ + N +KK R+M +LEES+ +MR +FN RFLALRN+KR+++ V N+R+REID E
Sbjct: 153 DDVRDINAITLAEKTIGDYKLKCADDYEVPEDQRNNATKKLRQMAMLEESMLSMRLQFNERFLALRNLKRQMIYAVRRDNKRIREIDVE 241
BLAST of mRNA_H-paniculata_contig26334.7194.1 vs. uniprot
Match: A0A482T059_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T059_9ARCH) HSP 1 Score: 99.0 bits (245), Expect = 6.740e-22 Identity = 53/89 (59.55%), Postives = 69/89 (77.53%), Query Frame = 1
Query: 55 EESRDVAAIALAEASIGDYKLKSSPDYEVPEEMQLNVSKKQREMVLLEESLHTMRSRFNRRFLALRNIKREILVTVASGNRRLREIDAE 321
++ RD+ AI AE +IGDYKLK S DYEVPE+ ++NV KK R+M +LEES+ TMR +FN RFLALR +KREI+ +V N+R+REID E
Sbjct: 1025 DDIRDLDAIRHAEKTIGDYKLKCSDDYEVPEDQRINVVKKIRQMAMLEESMLTMRLQFNDRFLALRQLKREIIFSVRRDNQRIREIDGE 1113
BLAST of mRNA_H-paniculata_contig26334.7194.1 vs. uniprot
Match: A0A7S0Z0C5_9CRYP (Hypothetical protein (Fragment) n=4 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0Z0C5_9CRYP) HSP 1 Score: 89.0 bits (219), Expect = 2.270e-20 Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 55 EESRDVAAIALAEASIGDYKLKSSPDYEVPEEMQLNVSKKQREMVLLEESLHTMRSRFNRRFLALRNIKREILVTVASGNRRLREIDAE 321
E+ DVAAI A +GDYKLK+ PDY VPE +++N KK+R+MVLLEES++T++ FN RFLALR +K I + + N R++EI+ E
Sbjct: 53 EDPTDVAAIEEANTLMGDYKLKTDPDYVVPEHLRINADKKRRQMVLLEESIYTIKMAFNDRFLALRELKSRIRANIRADNLRIQEINQE 141
BLAST of mRNA_H-paniculata_contig26334.7194.1 vs. uniprot
Match: A0A7S0N172_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N172_9CRYP) HSP 1 Score: 86.3 bits (212), Expect = 1.580e-19 Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 55 EESRDVAAIALAEASIGDYKLKSSPDYEVPEEMQLNVSKKQREMVLLEESLHTMRSRFNRRFLALRNIKREILVTVASGNRRLREIDAE 321
E+ D AAI AEA +GD+KLK+ + VPE ++++ KK+R+MVLLEES+H +R FN R LALR++KR IL T+A+ R+R I+ E
Sbjct: 31 EDPSDAAAIRAAEARMGDWKLKTDEGFVVPEHLRIDADKKRRQMVLLEESVHAVRMGFNERLLALRDLKRRILTTIAADKARIRAINRE 119
BLAST of mRNA_H-paniculata_contig26334.7194.1 vs. uniprot
Match: A0A7S1X257_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X257_9CHLO) HSP 1 Score: 87.4 bits (215), Expect = 1.720e-19 Identity = 43/88 (48.86%), Postives = 64/88 (72.73%), Query Frame = 1
Query: 55 EESRDVAAIALAEASIGDYKLKSSPDYEVPEEMQLNVSKKQREMVLLEESLHTMRSRFNRRFLALRNIKREILVTVASGNRRLREIDA 318
E DVA I AE ++GD+KLKS P++ VPEE +LN KK+R+M+LLEE ++ +R FN RFLALR++K+++ + N+RLRE+ +
Sbjct: 33 ENPADVALIVEAENNMGDFKLKSDPEFVVPEEERLNTEKKRRQMILLEEGMYNIRMEFNSRFLALRDVKKKVCADIKDKNKRLRELQS 120
BLAST of mRNA_H-paniculata_contig26334.7194.1 vs. uniprot
Match: A0A7S0DYL1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DYL1_9CRYP) HSP 1 Score: 89.4 bits (220), Expect = 1.040e-18 Identity = 43/89 (48.31%), Postives = 69/89 (77.53%), Query Frame = 1
Query: 55 EESRDVAAIALAEASIGDYKLKSSPDYEVPEEMQLNVSKKQREMVLLEESLHTMRSRFNRRFLALRNIKREILVTVASGNRRLREIDAE 321
E+ +DV+AI A+ +GDYKLK+ DY VPE ++++ KK+R+M+LLEES+H+++ FN R LALR++K++I+ + + N+R+REID E
Sbjct: 83 EDPKDVSAIQHAQKHMGDYKLKTEEDYVVPEHLRIDAEKKRRQMILLEESIHSIKMGFNDRLLALRDLKKKIIGNIQADNQRIREIDEE 171
BLAST of mRNA_H-paniculata_contig26334.7194.1 vs. uniprot
Match: A0A7S1G790_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G790_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.600e-18 Identity = 45/89 (50.56%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 55 EESRDVAAIALAEASIGDYKLKSSPDYEVPEEMQLNVSKKQREMVLLEESLHTMRSRFNRRFLALRNIKREILVTVASGNRRLREIDAE 321
E+ DV A+ A ++GDYKLKS+PDY+VPE +++ KK+R+MVLLEES+ +++S FN+R LALR++KR I+ V + N RL+ I+ E
Sbjct: 36 EDPADVEAVTHARENMGDYKLKSAPDYKVPEAKRVDNVKKRRQMVLLEESVFSIKSDFNKRLLALRDLKRAIVENVRADNARLKAINEE 124 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26334.7194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26334.7194.1 >prot_H-paniculata_contig26334.7194.1 ID=prot_H-paniculata_contig26334.7194.1|Name=mRNA_H-paniculata_contig26334.7194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp TIYKFCYLPLLAAPIWSCEESRDVAAIALAEASIGDYKLKSSPDYEVPEEback to top mRNA from alignment at H-paniculata_contig26334:2273..2870+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26334.7194.1 ID=mRNA_H-paniculata_contig26334.7194.1|Name=mRNA_H-paniculata_contig26334.7194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=598bp|location=Sequence derived from alignment at H-paniculata_contig26334:2273..2870+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26334:2273..2870+ >mRNA_H-paniculata_contig26334.7194.1 ID=mRNA_H-paniculata_contig26334.7194.1|Name=mRNA_H-paniculata_contig26334.7194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=642bp|location=Sequence derived from alignment at H-paniculata_contig26334:2273..2870+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |