mRNA_H-paniculata_contig11110.719.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig11110.719.1
Unique Name	mRNA_H-paniculata_contig11110.719.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot
Match: D7FJB5_ECTSI (Monophenol Monooxygenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJB5_ECTSI)

HSP 1 Score: 415 bits (1066), Expect = 2.250e-128
Identity = 199/313 (63.58%), Postives = 248/313 (79.23%), Query Frame = 1

Query:  637 SAGKWYTSLEQPHDEMHLAIGGQDQRRNK-KAERKYGKEGYTSVAKGGIEERQKPIPGSHGDMGESETAAFDPIFFFHHCNIDRLFWIWQKKWGKTVKGSLKIDPSDLEGTFGQNPKGQGGTRTVPGTTRLTMATPLHPFRSPATGDFYTSHDVVDLENQLCRTYSLGSLDKLEWPEQVLEDARPEVIFSVLNINKAAFLGSFKVIVFHQDPVSHTLSPVGSVSVLSRWNLKRCRNCQVHLQRDAHVDLTSLKDRLS-PEDVTKQTYIVHFIDRSTSYEKPVVASGQYKKGEWTVLTGCEKIHTVYVELDSSE 1569
            S GKWYTS+EQPHDE+HLAIGGQD +  K +    Y K G  S +   +  +   I GS+GDMGE+ETAAFDP+FFFHHCNIDR+ WIWQKKWGKT +GS++IDPSD+EGT+GQ+P GQGGTRT+PGTT+LTM TPLHPF+ P+ G++ TS DVVDL +QL R YSLGS DK+EWP +V+E   PEVI SV+NINKA+FLGSF+VIV H+DP S T++PV SVSVLSRWNLKRC+NCQ+HL RD HVD+TS+K R S  ED+TK  Y V F+DRS+S ++ VVASG+Y  GEW +L G EK+ +V +E+D  +
Sbjct:  274 STGKWYTSVEQPHDEIHLAIGGQDHQPIKTEVPETYDKNGDLSKSTKAVVAQ---IMGSNGDMGENETAAFDPVFFFHHCNIDRMIWIWQKKWGKTAEGSIEIDPSDMEGTYGQSPSGQGGTRTIPGTTKLTMDTPLHPFKLPS-GEYVTSRDVVDLRSQLGRGYSLGSFDKVEWPSEVIEKPGPEVILSVMNINKASFLGSFRVIVSHEDPASGTVTPVASVSVLSRWNLKRCKNCQIHLSRDVHVDITSVKRRFSLQEDITKHIYTVDFVDRSSSDKRRVVASGRYVDGEWKLLVGREKVESVRIEIDERD 582

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BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot
Match: UPI001D6200D2 (uncharacterized protein n=1 Tax=Truncatella angustata TaxID=152316 RepID=UPI001D6200D2)

HSP 1 Score: 175 bits (444), Expect = 8.930e-43
Identity = 109/260 (41.92%), Postives = 139/260 (53.46%), Query Frame = 1

Query:  628 WVYSAGK----WYTSLEQPHDEMHLAIGGQDQRRNKKAERKYGKEGYTSVAKGGIEERQKPIPGSHGDMGESETAAFDPIFFFHHCNIDRLFWIWQKKWGKTVKGSLKIDPSDLEGTFGQNPKGQGGTRTVPGTTRLTMATPLHPFRSPATGDFYTSHDVVDLENQLCRTYSLGSLDK-LEWPEQVLEDA---RPEVIFSVLNINKAAFLGSFKVIVFHQDPVSHTLSPVGSVSVLSRWNLKRCRNCQVHLQRDAHVDLT 1383
            WV  +G     +  SLEQPH+ +HLA+GG  Q+                    G+ +   PI G++GD+ E+ T   DPIFF HHC ID  FW WQKKWGKT KGSL +  S   GT   +P     T  +P  T LT  TPL PF S   G +YTS DV D+EN L  TY  GSLD  L  PE +  D    RPE +     IN+A + GSF V  + + P    +  +G  ++LSRW++KRC NCQV L  +A   LT
Sbjct:  259 WVIDSGSKDKYFVVSLEQPHNSIHLALGGFYQK--------------------GVYDAD-PILGANGDIAENNTDGLDPIFFMHHCYIDYAFWTWQKKWGKTAKGSLDVI-SGYPGTNSSDPM-TSPTPNIPPNTDLTPQTPLAPF-SKDDGTYYTSDDVTDIENDLGYTYGRGSLDPVLSAPEAMAPDPAIERPERLIQATGINRAQYPGSFVVRTYAKLPSGQKIE-IGREAILSRWDVKRCANCQVSLPVEALTPLT 493

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BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot
Match: A0A7K1U4P8_9BACT (Tyrosinase family protein n=1 Tax=Chitinophaga tropicalis TaxID=2683588 RepID=A0A7K1U4P8_9BACT)

HSP 1 Score: 171 bits (433), Expect = 1.920e-41
Identity = 105/258 (40.70%), Postives = 144/258 (55.81%), Query Frame = 1

Query:  658 SLEQPHDEMHLAIGGQDQRRNKKAERKYGKEGYTSVAKGGIEERQKPIPGSHGDMGESETAAFDPIFFFHHCNIDRLFWIWQKKWGKTVKGSLKIDPSDLEGTFGQNPKGQGGTRTV---PGTTRLTMATPLHPFRSPATGDFYTSHDVVDLENQLCRTYSLGSLDKLEW---PEQVLEDARPEVIFSVLNINKAAFLGSFKVIVFHQ-DPVSHTLSPVGSVSVLSRWNLKRCRNCQVHLQRDAHVDLTSLKDRLSPE 1410
            SLE PH+++HLA+GG                   ++   G      PIPG++GDMGE++TAAFDPIFFFHHCN+DR+FWIWQKK   T   SL I    +EG  G          +V   PG   LT+ +PL PF +P TG FYTS + V++E QL  TY++GSLD ++W    ++  E+        V NIN+    GSF +  +   D   H    +G  SVLSRWN+  C NC+ HL  +A+ +L  + D+ SP+
Sbjct:  269 SLEAPHNDIHLAVGG------------------FNIP--GAAHDYSPIPGANGDMGENDTAAFDPIFFFHHCNVDRMFWIWQKKHQST--NSLTI----MEGYPGTRTTDDDNVPSVGFQPGQL-LTIDSPLEPFINPQTGVFYTSRECVNIEEQLGYTYTVGSLDLIKWMHGEDKAGEEELSTKKLRVSNINRGNVFGSFVITAYATVDGQEHY---IGHHSVLSRWNVLGCENCRAHLTAEAYFNLDKVADK-SPD 495

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BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot
Match: UPI000DF443BC (tyrosinase family protein n=1 Tax=Candidatus Halocyntiibacter alkanivorans TaxID=2267619 RepID=UPI000DF443BC)

HSP 1 Score: 169 bits (427), Expect = 1.130e-40
Identity = 106/275 (38.55%), Postives = 151/275 (54.91%), Query Frame = 1

Query:  631 VYSAGKWYTS-------LEQPHDEMHLAIGGQDQRRNKKAERKYGKEGYTSVAKGGIEERQKPIPGSHGDMGESETAAFDPIFFFHHCNIDRLFWIWQKKWGKTVKGSLKIDPSDLEGTFGQNPK-GQGGTRTVPGTTRLTMATPLHPFRSPATGDFYTSHDVVDLENQLCRTYSLGSLDKLEWPEQVLEDARPEVIFSVLNINKAAFLGSFKVIVFHQDPVSHTLSPVGSVSVLSRWNLKRCRNCQVHLQRDAHVDLTSLKDRLSPEDVTKQTY 1431
            V SAG W ++       LE PH+++HL++GG D         ++G EG TS            + G++GDMGE+ TAA DPIFFFHHCN+DR+FW+WQK+        LK++   + G  G N    QG T  V   T LT ++PL PFR   + ++Y+S D +D ENQL  TY  GSL++L  P+Q    +  +V+ +V  +N+A   GSF +    +  +   +  +G  SVLSRWN+  C NCQ HL   AH  L    D LS  ++   T+
Sbjct:  260 VTSAGAWNSASQPYAVPLESPHNDIHLSVGGFDL-----PYPQFGGEGSTSGQ----------VAGANGDMGENNTAALDPIFFFHHCNVDRMFWLWQKR-----NPDLKVEI--ISGYAGTNSSDSQGPTPGVAPDTPLTTSSPLAPFRKANSQEYYSSEDCIDTENQLGYTYGPGSLEEL--PDQAQTKSTGDVL-TVTGVNRAHLQGSFIITALAR--IGDRVEFLGYESVLSRWNVDGCANCQTHLDVSAHFPL----DMLSNSEIASATF 503

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BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot
Match: A0A1M7JYU0_9BACT (Tyrosinase n=1 Tax=Chitinophaga jiangningensis TaxID=1419482 RepID=A0A1M7JYU0_9BACT)

HSP 1 Score: 168 bits (426), Expect = 1.420e-40
Identity = 99/248 (39.92%), Postives = 140/248 (56.45%), Query Frame = 1

Query:  658 SLEQPHDEMHLAIGGQDQRRNKKAERKYGKEGYTSVAKGGIEERQKPIPGSHGDMGESETAAFDPIFFFHHCNIDRLFWIWQKKWGKTVKGSLKIDPSDLEGTFGQNPKGQGGTRTVPGTTRLTMATPLHPFRSPATGDFYTSHDVVDLENQLCRTYSLGSLDKLEWPE-QVLEDARPEVIFSVLNINKAAFLGSFKVIVFHQDPVSHTLSPVGSVSVLSRWNLKRCRNCQVHLQRDAHVDLTSLKDR 1398
            +LE PH+++HLA+GG                   +V   G +    PIPG++GDMGE++TA FDPIF+FHHCNIDR+FW+WQKK  K  + +L I P    G  G N    G +        LT+ +PL PF+   +  +YTS+DVVD+ENQ   TYS+GSLD++ +   + L +A P     V NIN+    GSF +  +    V      +G  SVLSRWN+  C NC+ HLQ +A  ++ +L  +
Sbjct:  268 ALETPHNDIHLAVGG------------------FNVP--GQDHDFSPIPGANGDMGENDTAGFDPIFYFHHCNIDRVFWVWQKK--KGYQKNLTIIP----GYPGTNSSDGGPSAGYGPNEPLTLDSPLKPFKKRDSDIYYTSNDVVDIENQCGYTYSVGSLDQISFMHGEELAEAPPTNKLRVSNINRGNIYGSFVITAYAN--VGGKDYYIGHHSVLSRWNVLGCENCRAHLQAEAFFNVDNLAQK 487

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BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot
Match: UPI001C4917C0 (tyrosinase family protein n=1 Tax=Chitinophaga sp. sic0106 TaxID=2854785 RepID=UPI001C4917C0)

HSP 1 Score: 167 bits (422), Expect = 4.760e-40
Identity = 98/267 (36.70%), Postives = 143/267 (53.56%), Query Frame = 1

Query:  631 VYSAGKWY---------TSLEQPHDEMHLAIGGQDQRRNKKAERKYGKEGYTSVAKGGIEERQKPIPGSHGDMGESETAAFDPIFFFHHCNIDRLFWIWQKKWGKTVKGSLKIDPSDLEGTFGQNPKGQGGTRTVPGTTRLTMATPLHPFRSPATGDFYTSHDVVDLENQLCRTYSLGSLDKLEWPEQVLEDARPEVI-FSVLNINKAAFLGSFKVIVF-HQDPVSHTLSPVGSVSVLSRWNLKRCRNCQVHLQRDAHVDLTSLKDR 1398
            + S+G+W           +LE PH+++HLA+GG                 +    K   +    PIPG++GDMGE++TA FDPIF+FHHCN+DR+FW+WQKK     + SL I    + G  G +    G +        LT+ +PL PF+   + ++YTS+ VVD+ENQ   TYS+GSLD + W   V   A P      V NIN+    GSF +  + + D   H    +G  S+LSRWN+  C NC+ HLQ +A  ++ +L  +
Sbjct:  250 ITSSGQWNKDNPKAPVTVALETPHNDIHLAVGG-----------------FNIPGKDNPD--FSPIPGANGDMGENDTAGFDPIFYFHHCNVDRMFWVWQKK--HDHRTSLSI----INGYPGTSSSDGGPSAGYGPNEPLTLDSPLKPFKHNNSDNYYTSNQVVDIENQCGYTYSVGSLDLITWMHGVTLAAEPPTNKLRVSNINRGNIYGSFVITAYANVDGQDHY---IGHQSILSRWNVLGCENCRAHLQAEAFFNVDNLAQK 488

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BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot
Match: A0A1I0RWB3_9BACT (Tyrosinase n=1 Tax=Chitinophaga sp. YR573 TaxID=1881040 RepID=A0A1I0RWB3_9BACT)

HSP 1 Score: 166 bits (419), Expect = 1.160e-39
Identity = 96/253 (37.94%), Postives = 136/253 (53.75%), Query Frame = 1

Query:  658 SLEQPHDEMHLAIGGQDQRRNKKAERKYGKEGYTSVAKGGIEERQKPIPGSHGDMGESETAAFDPIFFFHHCNIDRLFWIWQKKWGKTVKGSLKIDPSDLEGTFGQNPKGQGGTRTVPGTTRLTMATPLHPFRSPATGDFYTSHDVVDLENQLCRTYSLGSLDKLEW---PEQVLEDARPEVIFSVLNINKAAFLGSFKVIVFHQ-DPVSHTLSPVGSVSVLSRWNLKRCRNCQVHLQRDAHVDLTSLKDRLS 1404
            +LE PH+++HL++GG +                     G       PIPG++GDMGE++TAAFDP+FFFHHCN+DR+FWIWQKK   T     +I P    G  G N    G +   P    LT+ +PL PF + ATG FYT+ + +++E QL   Y++GSLD + W    E   ++        V NIN+    GSF +  +   D   H    +G  SVLSRWN+  C NC+ HL+ +A+ +L  +   LS
Sbjct:  269 ALETPHNDIHLSVGGFN-------------------IPGPNNPDFSPIPGANGDMGENDTAAFDPVFFFHHCNVDRMFWIWQKKHDFT--NHFQIIP----GFPGTNSDDGGPSAGYPKNEPLTLDSPLKPFLNSATGTFYTTRECINIETQLGYVYTVGSLDLIHWMHGEELAAQEKLTTNKLRVANINRGNIFGSFVLTAYATVDGKEHY---IGHHSVLSRWNVLGCENCRAHLKTEAYFNLDKINPDLS 493

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BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot
Match: A0A1G9Z9J2_9SPHI (Tyrosinase n=1 Tax=Pedobacter steynii TaxID=430522 RepID=A0A1G9Z9J2_9SPHI)

HSP 1 Score: 164 bits (416), Expect = 4.000e-39
Identity = 109/272 (40.07%), Postives = 145/272 (53.31%), Query Frame = 1

Query:  598 QNLLPYVPRPWVYSAG-KWYTSLEQPHDEMHLAIGGQDQRRNKKAERKYGKEGYTSVAKGGIEERQKPIPGSHGDMGESETAAFDPIFFFHHCNIDRLFWIWQKKWGKTVKGSLKIDPSDLEGTFGQNPKGQGGTRTVPGTTRLTMATPLHPFRSPATGDFYTSHDVVDLENQLCRTYSLGSLD---KLEWPEQVLEDARPEVIFSVLNINKAAFLGSFKVIVFHQDPVSHTLSPVGSVSVLSRWNLKRCRNCQVHLQRDAHVDLTSLKDRL 1401
            Q + P   +P V     K   SLE PH+ +HLA+GG D                 S  K        PIPG++GDMGE++TAA DPIF+FHHCNIDR+FW+WQKK G T   +L+I P +  GT       QG T      T LT+ +PL PF+   T D+Y S D +++E QL  TYS GS+D    L   ++  +D  P  I  V  INKA   GSF V  F    V+     +G+ ++LSRWN + C NCQ HL+  A   L  ++ +L
Sbjct:  258 QTIDPVTGKPMVDDPNFKAVVSLESPHNSIHLAVGGCD---------------IPSYNK-------SPIPGANGDMGENDTAALDPIFYFHHCNIDRVFWLWQKKHGAT--DALEIIP-EYPGT--NTIDNQGPTPGFAPNTWLTLDSPLEPFKKNET-DYYNSKDCINIETQLGYTYSQGSMDDHASLFLAKK--QDEFPSRIIKVSKINKAPIRGSFTVSAFMN--VNGEKLHLGTEAILSRWNSQFCANCQTHLEVKAFFKLPIIETKL 497

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BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot
Match: A0A845HEB3_9BURK (Tyrosinase family protein n=1 Tax=Rugamonas sp. FT107W TaxID=2692168 RepID=A0A845HEB3_9BURK)

HSP 1 Score: 164 bits (415), Expect = 5.550e-39
Identity = 105/263 (39.92%), Postives = 142/263 (53.99%), Query Frame = 1

Query:  637 SAGKWYTSLEQPHDEMHLAIGGQDQRRNKKAERKYGKEGYTSVAKGGIEERQKPIPGSHGDMGESETAAFDPIFFFHHCNIDRLFWIWQKKWGKTVKGSLKIDPSDLEGTFGQNPKGQGGTRTVPGTTRLTMATPLHPFRSPATGDFYTSHDVVDLENQLCRTYSLGSLDKLEWP------EQVLEDARPEV--IFSVLNINKAAFLGSFKVIVFHQDPVSHTLSPVGSVSVLSRWNLKRCRNCQVHLQRDAHVDLTSLKDRL 1401
            S G     LEQPH+++H+A+GG D                T+V     +    PI G++GDMGE++TA  DPIF+FHHCN+DR+FW WQKK G   +  L + P    GT   +   QG T  V G   L+M +PL PF + A G  Y S+DV+++E QL  TYS+GSLD+  WP      +Q+L  A  +   + +V   NKAA  GSF +  +    V      VG  SVLSR  ++ C NCQ HL   AH  L  L D++
Sbjct:  272 SGGTPVVPLEQPHNDIHVAVGGVD---------------ITTVKTEDFD--GSPIVGANGDMGENDTAGLDPIFYFHHCNVDRMFWAWQKKTGNLDE--LDVIPQ-YPGT--NSVDNQGPTPGVAGNVWLSMESPLMPF-TDAKGKVYVSNDVINIEKQLNYTYSIGSLDQASWPAPGAGKQQMLNVAEGQSGKVLTVTGANKAAVSGSFLIAGY--ATVKGRKHLVGVQSVLSRNAIQGCANCQTHLNVKAHFSLNHLSDQV 509

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BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot
Match: A0A2L0F4A2_SORCE (Pigment biosynthesis-related tyrosinase n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A2L0F4A2_SORCE)

HSP 1 Score: 163 bits (412), Expect = 1.190e-38
Identity = 104/272 (38.24%), Postives = 149/272 (54.78%), Query Frame = 1

Query:  661 LEQPHDEMHLAIGGQDQRRNKKAERKYGKEGYTSVAKGGIEERQKPIPGSHGDMGESETAAFDPIFFFHHCNIDRLFWIWQKKWGKTVK--GSLKIDPSDLEGTFGQNPKGQGGTRTVPGTTRLTMATPLHPFRSPATGDFYTSHDVVDLENQLCRTYSLGSLDK-LEWPEQVLEDARPEVIFSVLNINKAAFLGSFKVIVFHQDPVSH---TLSPVGSVSVLSRWNLKRCRNCQVHLQRDAHVDLTSLKDRLSPEDVTKQTYIVHFIDRST 1458
            LEQPH+++HLA+GG D              G T      ++  Q  + GS+ DMGE+ TAA DPIF+FHHCNIDR+FW+WQK+  +T K  G + +      GT   +   QG T  +P  T+L   TPL PF +P T   +TS DVV++E +L  TY  GSL++  +     ++    + I +V  I++A F GSF +  F     ++   T  P+G  SVLSRW++ +C NC+ HL   AH  L++L D    E+V   T+ V    R T
Sbjct:  282 LEQPHNDIHLAVGGFDL------------PGQT------LDSGQ--VTGSNADMGENNTAALDPIFYFHHCNIDRMFWLWQKRHNQTEKLEGPINLGTGGYPGTSSTD--NQGPTPGIPPGTQLDYTTPLRPFTNPKTNAPFTSEDVVNIE-KLGYTYGPGSLEEPTKRVPAAVKAGGSKKILTVSGIDRARFQGSFVLSAFATITGANGQTTTRPLGHHSVLSRWSVIKCANCRTHLNVIAHFPLSTLTD----EEVENATFSVKITQRGT 526

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig11110.719.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FJB5_ECTSI	2.250e-128	63.58	Monophenol Monooxygenase n=2 Tax=Ectocarpus TaxID=...	[more]
UPI001D6200D2	8.930e-43	41.92	uncharacterized protein n=1 Tax=Truncatella angust...	[more]
A0A7K1U4P8_9BACT	1.920e-41	40.70	Tyrosinase family protein n=1 Tax=Chitinophaga tro...	[more]
UPI000DF443BC	1.130e-40	38.55	tyrosinase family protein n=1 Tax=Candidatus Haloc...	[more]
A0A1M7JYU0_9BACT	1.420e-40	39.92	Tyrosinase n=1 Tax=Chitinophaga jiangningensis Tax...	[more]
UPI001C4917C0	4.760e-40	36.70	tyrosinase family protein n=1 Tax=Chitinophaga sp....	[more]
A0A1I0RWB3_9BACT	1.160e-39	37.94	Tyrosinase n=1 Tax=Chitinophaga sp. YR573 TaxID=18...	[more]
A0A1G9Z9J2_9SPHI	4.000e-39	40.07	Tyrosinase n=1 Tax=Pedobacter steynii TaxID=430522...	[more]
A0A845HEB3_9BURK	5.550e-39	39.92	Tyrosinase family protein n=1 Tax=Rugamonas sp. FT...	[more]
A0A2L0F4A2_SORCE	1.190e-38	38.24	Pigment biosynthesis-related tyrosinase n=1 Tax=So...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig11110	contig	H-paniculata_contig11110:1828..8363 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	387.1
Seed ortholog evalue	7.3e-105
Seed eggNOG ortholog	2880.D7FJB5
KEGG rclass	RC00046,RC00150,RC00180
KEGG ko	ko:K00505
KEGG Reaction	R00731,R02078,R02363,R02383,R04693,R04884
KEGG Pathway	ko00350,ko00950,ko00965,ko01100,ko01110,ko04916,map00350,map00950,map00965,map01100,map01110,map04916
KEGG Module	M00042
Hectar predicted targeting category	other localisation
EggNOG free text desc.	Common central domain of tyrosinase
EggNOG OGs	28UM2@1,2RXVS@2759
EC	1.14.18.1
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000
Exons	8
Model size	3556
Cds size	891
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig11110.719.1	prot_H-paniculata_contig11110.719.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig11110 3812..7682 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928818.01876-UTR-H-paniculata_contig11110:1827..3811	1622928818.01876-UTR-H-paniculata_contig11110:1827..3811	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig11110 1828..3811 -
1691480632.029697-UTR-H-paniculata_contig11110:1827..3811	1691480632.029697-UTR-H-paniculata_contig11110:1827..3811	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig11110 1828..3811 -
1622928818.165695-UTR-H-paniculata_contig11110:7682..8363	1622928818.165695-UTR-H-paniculata_contig11110:7682..8363	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig11110 7683..8363 -
1691480632.1156273-UTR-H-paniculata_contig11110:7682..8363	1691480632.1156273-UTR-H-paniculata_contig11110:7682..8363	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig11110 7683..8363 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig11110:1828..8363-
coding sequence from alignment at H-paniculata_contig11110:1828..8363-

protein sequence of mRNA_H-paniculata_contig11110.719.1

>prot_H-paniculata_contig11110.719.1 ID=prot_H-paniculata_contig11110.719.1|Name=mRNA_H-paniculata_contig11110.719.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bp
MHLAIGGQDQRRNKKAERKYGKEGYTSVAKGGIEERQKPIPGSHGDMGES
ETAAFDPIFFFHHCNIDRLFWIWQKKWGKTVKGSLKIDPSDLEGTFGQNP
KGQGGTRTVPGTTRLTMATPLHPFRSPATGDFYTSHDVVDLENQLCRTYS
LGSLDKLEWPEQVLEDARPEVIFSVLNINKAAFLGSFKVIVFHQDPVSHT
LSPVGSVSVLSRWNLKRCRNCQVHLQRDAHVDLTSLKDRLSPEDVTKQTY
IVHFIDRSTSYEKPVVASGQYKKGEWTVLTGCEKIHTVYVELDSSE*

mRNA from alignment at H-paniculata_contig11110:1828..8363-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig11110.719.1 ID=mRNA_H-paniculata_contig11110.719.1|Name=mRNA_H-paniculata_contig11110.719.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6536bp|location=Sequence derived from alignment at H-paniculata_contig11110:1828..8363- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCCTTCCAGGCGATCTGTAGCTCCCTTTCGTTGGTGATTTCGAGATTTC
GAGTCTCTTTTTTTCCATCATACTAGAAAACAGACATCAGATTGGTTCCA
CAATCCACACCACCTCCATATCTAGACTGTACCCCAGCTGCATGATGTGG
TTTGAAACATTAATGCTCCGTTATGTCACTAAGGGTAATTATGACAGCGC
TGTAATGAACATCTCTCATTAGTAGAGATTTGTGCGATCGATTTAGCTTT
CATTTATGTGGATGGATTTCCTGTAGACTCGATAGCGGTACTCTGGCCAT
GGGTCGAAAGTAAAACAGAGCTCATAACGTGGCGCGCAGCGACAGCGGCA
TCACCAGCTCCAGAACCATGAACAGGGCAAGTTGAAGGAAATCCCGCACC
TGTACCGTTTCTGTCAGCGCTCTGTAGGACAAGCGTCGGCTTTTGCAACA
GAACAAACAATACACAGAGAATAAATGCCAACTGCCACTCGGTTGCGTTG
ACACAGCCTGGGGCACATTACGGTAGAGATTCTTTTTGCCATGTCTTGAA
CCTTCTCCGTGTAGACGTGTCGAAGTGTATATTTGCTTATTTGTAGCCAA
AATTTGTTGCCATATGTTCCGCGACCGTGGGTATACAGTGCCGGCAAATG
GTACACATCGCTCGAGCAGCCTCACGACGAGATGCATCTCGCGATTGGGG
GGCAAGACCAACGCCGCAATAAGAAAGCCGAACGCAAGTACGGCAAGGAA
GGGTACACGTCAGTGGCCAAGGGGGGTATAGAGGAGCGTCAAAAGCCGGT
GAGATTATCCAGAGACAACGAGGCACGTGAATCATGGTGTTACGAAACTC
AACGCCTGTGTGTCGGCTGAACAGTTCAAGTCAATATTGCTTCACCATTA
TGCTACACATAGCATAAGGGATCGGAATCTAATATATTATTGCTCGAGAT
GTATTGCAGGATTTACCGATGAATGCAGAAAATCCCGAAGCTACGGAAAA
CGGAGGATGACACGAAATGGGATTGATACTCTACTTGTGTCTGTTCATCT
GTTATGCATATCGTGGTGGTTCCCTTATGCTGCGCGTGACAGATTCCGGG
ATCACATGGAGATATGGGCGAAAGCGAGACAGCGGCATTCGACCCAATCT
TCTTCTTTCATCACTGCAACATCGATCGCCTGTTCTGGTGAGAAACCCAT
TATGTGGTTATCAAATATACATCGCTATTGTGGATTTGACACGGACGGAT
GGGCATGGAAAAAGCTCCTAAATTGGTAGAGCCGAAGCTACGGAGCTACC
GGATGGAACCTTCTTGCGGGGGAGCACTTTGTATTTATTCAAGCCGCACG
GTCTTTCGTAGGATGCTTTCGGTATCACACAGAGGGGATATGCCATTATA
CTCCGTACCTTTCAAGATCTCATAGTCTTCGAAATGTTAACGAGAGGACG
TTGTTTCATGCGTACTTTACCCTTGGGACAACTTCATCAGGATCTGGCAA
AAGAAATGGGGGAAGACGGTCAAGGGATCTCTGAAGATCGATCCATCTGA
TCTAGAAGGCACCTTCGGACAGAATCCCAAGGGACAAGGCGGGACTCGCA
CGGTTCCCGGCACCACGAGACTTACTATGGCCACCCCCCTGTGAGATGTA
CATACATACAGATATCATACTTTGCAGGTGCCGCTAATCAAACTAGAAAA
CTGATGCGAGGCCATGGGGTGTACCCCTCCACTTTCGCACTTGCCATTAC
TACACTGGTCCTAGCAGCACCGCTCGCCCGAAGGATTGACGGTGACAGGC
ATTATTTGAGTGGTAGATGGTATCCGTGTTCGAAGAGGAAGCTTTGTGGG
CTACTGTTCTATATATGTTATACTGGAAGGCCTGTATGTGTGTCATTTCT
AAGTTCTCCTGCTTACCCCCCCTTTTCCCCTTGGTGTCGGCGATACCCAA
ATATATATGGTTCAGACACCCCTTCAGGTCTCCGGCGACAGGAGATTTCT
ACACTTCCCATGATGTCGTTGACCTCGAGAACCAACTCTGCAGGACCTAC
AGCTTGGGCTCACTCGACAAGGTTCGTCTGCACGAACAAAAAACGTGTTA
ATGTCCGTAACTTCGCGATACTCCAATGCGAAGAGAGATGCACTGTTTTT
AGCGTGTATTGGGCAAATACACAGAGGGTCGAGAGGTCGATTTCTGAGAA
ATAGACCCCAGAAGTGTGCTCCGTGCGTTGCCATCGGCCGCGCATGTTTA
ATGACAGTGGAGGGTGCAGAGAATGCCCAGGGCGCACCTAGAGGAAGAAA
CATAAAGTCATACAAGTGTAAGCGCTGTAGTTATCGAGTATTTGCTAGAG
AGCACGACCACCGGCGTTTACACGATTTAATTTCATTAGCGCACAGTATT
TAGTCACATAAGGCGCAATTTCTCTGTACATAGCTCTCTACCGTACTCAG
TTCACACGTTGCTGGTGGTGGTGGTGTTTGTTGTTGTTCTTGCACCTGTC
GGACGCTTGCCTCAGTTGGAGTGGCCTGAGCAGGTGCTGGAGGATGCAAG
GCCTGAAGTGATATTCAGCGTCCTCAACATCAACAAGGCGGCCTTTCTCG
GTTCATTCAAGGTCATCGTGTTCCACCAGGTACGTTGTACTCGTGAAGAA
TTCGCGACGGAAATCTCTGCCGAGATAGCCAAGATAGCAGCGGCTTCCTA
AGGGCCTAGCTTTATGCTACTCACCGCAAGTTTTAGAGTCCGTCGCTTGT
TTCGAGCTCAACCCACTGGAAAGAACTCAGACAGAACTATCATGATATCG
GAGAATTGTTCTTATCGTATTTATCCCAAGCACCATCTAGCCAACGACAA
AGAGGGTGTTCGTTGGTCTCGATATTGTTCCGTCCTCGTGCACTGGATAT
AACTATTAATAACCGTAGGAATATTGCTGCCGCCGCGTTTTTTTTTAAGC
AATAGCTAGCCAACGGCTGATCGTGGTATTCGTCTCGCTCTGCTGTTCCG
TCTTTCTTTCCTATCAGGATCCCGTTAGCCACACCCTTTCCCCTGTTGGA
AGCGTGAGCGTCCTCAGTCGATGGAACCTTAAGCGGTGAGTCTTTGGCAT
ACTTCGAAGTACATGTTTCTCTCTTTCTCTTTCTCTTTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCGTGCTACAACTATTTCGTTGACTTG
TGAGACATTTCTCCTTTTGTCCTGTTGTATGGAACCGTCGTTGTAGTGAA
GCAATGGCTCTTTTGAATATGTTTGATATGTGCACAATGGACATTTTTAG
TTGGTACTGCTGTGTTTATTGTCAGATTCGCAGCAGGCCGCTGACGAACT
CGAGTGCTTTGCTCCTCGAAATTGAAGATATCAAACTCTTAACAAGCGAA
TTGCCCCCACTCACTGTGCTCGAAACGGTGTGGTTCTGCACGTGTTCACT
ATATGTAGATGCAGAAACTGCCAGGTCCATCTGCAGCGAGACGCGCATGT
GGATCTCACATCGCTTAAGGACCGGCTCTCCCCGGAGGATGTTACCAAGC
AGACCTACATCGTGCATTTCATTGACCGTAGCACCTCCTACGTGAGTTTT
GGATCTTCTGTTGTTGACTGCAGTACGCTATCGGTGGTTTTCGCATGGCA
AACAAACTAATTTAGTGTTACTGTCATTTGAGTGACCTATTTCGATTGTG
GGGCATCGTTTGGTTCGACACAAAATGTTTGTATGGGCTGTGGTTCCGCT
GTTACTTGAAGATCGATAGTAGTACTGCAGCCCAGAAACGTTGCAACCGA
AGACATAGTAAAATGCGTGAAGACAGAAAAGTAGTTGGCTCTCCGTTACT
CATATGCCCACGGTGATGCATGTGAAACGACGCGCATGTATATCGACTTG
TTCTCTGACCCACTAATCCTGTATAAGAAGACGTTGTTGCACCGAGAGAC
CGACAGCACTACGTTTTCACTGCTGCTGTTGCTGTGGCCTCGCTGGCAAT
TGCGCACAGGGCATTGACTTCGCCGATTGTCACGCCATATGAGTTTTGGC
TGTTTGCATGGAACCAACCAGACGCCAGACATTTTATGTGACACCGACAA
GCTCACCGAATGATCGCGCCATGCGAGGTTGCGTCGGGACGCATTCGAGA
GAAGATTCAGATAGCTTTGTGGGCAGAGTGATATTAGTGCGTGTCGGGTC
CTGAACTGTTTCTTTTATGTGTACATGTATATATGAAACGTCAGACCATT
TCTAATGATAGCCATACTCCAGTCCCCGCATTGACCCCACACTCATACCC
TAACAACAGTCAAGGTCTCAAATGAAATCAACGATTGTTACTCTACCATT
GTTATTGGAGCCATGTCTAACGAACATTTGTTGGACAACAACAGTGCATT
CTACGGTATTCGCGATGACACCCGTTACCATTCTGACATTTCAGGAAAAG
CCAGTGGTAGCGAGCGGGCAATACAAGAAAGGAGAATGGACCGTGTTGAC
GGGATGCGAGAAGATCCACACCGTGTACGTCGAATTGGACAGCAGTGAAT
AGTTAAGCAAGGTGCTACAGGCGCAGGTAATATTCCACGAAAGACATTTT
GGCTCGGGCTGAAGAAGAGAGGACGTTGGTTGGTGTTTTTTGCGGAGGAG
CCAGGCATGGAGATGCCATCTTAAAATAGTAGAATTAGGTCCGGTACCAG
TACAGAAAGTAGAGGCAACGAGTGTTCCGTTCGTTCGTCCCGTTACTATT
TAGACTGGATTTTTGGAGGACATACGAGCAGATGCCGCGTGTGATTTTGT
GATTATGCGTGGGTAAAAGTATTATCCACACGTTTTTGTACTAGTTCAGC
AGGGCTCTCCTTACTTGTTCCTACAACGTACTTGAGGTGACCAAACGTGC
AAGTTCAACCGAGGTTTAGACGAATTTTGAGAAGCACGGGTGTATGGTCT
ACTTTTAAGTTTGCGACAGTGCGGTACATGATACCGACGCTTTTTTAATT
AGGGGGAGAAAGTAGGAACGAATCGTCGCTTTACCGTGTCAGCGTACAGT
AACGGGAGTATCCAAGTCTCGTTCTAATTGCCTGTGTTGAACATTGATAT
CTCTTGCAGGTGGTTGCTCTAGTGTAGCATTGGTTTTGCGGCGAGCTGAG
GTAGTACGGTATGACTCCGTCGTCGGTTATACGGAGTGTATAATCATGGG
GGGCATCTTGGGCTGTGGACCATTGGAAGGTTTTTGTCCATAGAGTTTTG
TCTCGGCTTAATGGTATGAAGATTGTGTATCGATTGGTTGAGGTGCGTGG
AGGTGATGCTGGACGGTGGAATGATAATATGGTGGAGAACCGATGGTTTT
GATGTGCATGTATTTATTCGCGTGCTTCTTTTTGTATATTGATTGGTGTT
GATGTTGACAACGACTCACAGGGGTGACGGGTTCACGTGTCATGGAGGAT
GGTTAAGCGAGGATTTCGGTATGTTTTACTGCGACAAACTTGAGCTATAG
GCATAAAAACGCAACCCTAATAGGGTTAACACAGCTCATGACTGGTGGAA
TCTCGTTTGATGGGCGAAGTTGTTGTGCGTGTTTGGCCTATGCATTTTTC
GAGAAATTACGTCACTGTCTGTGTTGTAGCAGATAAGTTGCTTTAGAGCT
TGCGTTGCGACACCTTTCATGTATAGCTCTCATTGACGAAACAGCTTCAG
GTTGCTTGCCGTTGCACTGGTCACAGGGCGGTGAAACAGTGCCGAAGCGA
CTGGAGTAAACCCCGAGCAGAGCCAGTGAGATCGAGAATGATGGCGATGG
TTCGAAGGAGAACGGCAATACTGTCTGTAGCAGCACTAAGGCAAAGAATA
CAAAGTAGTGCAAAACTGCCCAGTACCAGTACAAAATATCACATCAATTG
ATGGGAGTAGAGAAAGGAATAATTGTGACAAGTAGAGAAGAGCATAGAGT
CCAACGTAGAGGCGTACGGAAAAGAGAAATCAGAGAAGTCAGATGAGGTG
GGTGGGGAGGAGAAGGGGCGGCTAGTATGCGCCTCTGCGTGGTGGAGTAA
GTAAAACTGGACGCTAACGCGTGCTCTTGTCAATGTTGCCTCAATGCCTC
GTAACGGGAGATTCGGATGCGCGTTCTATACCGGTAATGTGAACCATCCT
ATGGTAGGGGGTGGGGATATGCGAGCCGCCTTGTTTATCGAAGGACCCGC
TTTGAGAATGGGATCGGGATTCGTTTTTCGCGTTTGTGGCCCCCCTTTGT
TCATAGAAGGACCCGATTTGAGAAGGAGAGTGGGCGTTTTTGTGCATTCG
TTGCCCCCCCTTGAACGGAACTCCTATTTCAACTCGTGGACTGTGCACCT
TTTAGGGGTGCACAAATACATGCAATTGACATGGTTTTGTTCTCGTTATT
TTGGTACCTCTTTTGCGAAGCGGCCTTTGTTAAACGTTGATCCCTTATCA
ACAACATACTGGTGAAATGGGGAGCCAACTTTGAGATGGGGACCCTAGGT
TATATTGGAAATAGGCTGTATCCTGAAGATCCGATA

Coding sequence (CDS) from alignment at H-paniculata_contig11110:1828..8363-

>mRNA_H-paniculata_contig11110.719.1 ID=mRNA_H-paniculata_contig11110.719.1|Name=mRNA_H-paniculata_contig11110.719.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1782bp|location=Sequence derived from alignment at H-paniculata_contig11110:1828..8363- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCATCTCGCGATTGGGGGGCAAGACCAACGCCGCAATAAGAAAGCCGA
ACGCAAGTACGGCAAGGAAGGGTACACGTCAGTGGCCAAGGGGGGTATAG
AGGAGCGTCAAAAGCCGATGCATCTCGCGATTGGGGGGCAAGACCAACGC
CGCAATAAGAAAGCCGAACGCAAGTACGGCAAGGAAGGGTACACGTCAGT
GGCCAAGGGGGGTATAGAGGAGCGTCAAAAGCCGATTCCGGGATCACATG
GAGATATGGGCGAAAGCGAGACAGCGGCATTCGACCCAATCTTCTTCTTT
CATCACTGCAACATCGATCGCCTGTTCTGATTCCGGGATCACATGGAGAT
ATGGGCGAAAGCGAGACAGCGGCATTCGACCCAATCTTCTTCTTTCATCA
CTGCAACATCGATCGCCTGTTCTGGATCTGGCAAAAGAAATGGGGGAAGA
CGGTCAAGGGATCTCTGAAGATCGATCCATCTGATCTAGAAGGCACCTTC
GGACAGAATCCCAAGGGACAAGGCGGGACTCGCACGGTTCCCGGCACCAC
GAGACTTACTATGGCCACCCCCCTGATCTGGCAAAAGAAATGGGGGAAGA
CGGTCAAGGGATCTCTGAAGATCGATCCATCTGATCTAGAAGGCACCTTC
GGACAGAATCCCAAGGGACAAGGCGGGACTCGCACGGTTCCCGGCACCAC
GAGACTTACTATGGCCACCCCCCTACACCCCTTCAGGTCTCCGGCGACAG
GAGATTTCTACACTTCCCATGATGTCGTTGACCTCGAGAACCAACTCTGC
AGGACCTACAGCTTGGGCTCACTCGACAAGACACCCCTTCAGGTCTCCGG
CGACAGGAGATTTCTACACTTCCCATGATGTCGTTGACCTCGAGAACCAA
CTCTGCAGGACCTACAGCTTGGGCTCACTCGACAAGTTGGAGTGGCCTGA
GCAGGTGCTGGAGGATGCAAGGCCTGAAGTGATATTCAGCGTCCTCAACA
TCAACAAGGCGGCCTTTCTCGGTTCATTCAAGGTCATCGTGTTCCACCAG
TTGGAGTGGCCTGAGCAGGTGCTGGAGGATGCAAGGCCTGAAGTGATATT
CAGCGTCCTCAACATCAACAAGGCGGCCTTTCTCGGTTCATTCAAGGTCA
TCGTGTTCCACCAGGATCCCGTTAGCCACACCCTTTCCCCTGTTGGAAGC
GTGAGCGTCCTCAGTCGATGGAACCTTAAGCGGATCCCGTTAGCCACACC
CTTTCCCCTGTTGGAAGCGTGAGCGTCCTCAGTCGATGGAACCTTAAGCG
ATGCAGAAACTGCCAGGTCCATCTGCAGCGAGACGCGCATGTGGATCTCA
CATCGCTTAAGGACCGGCTCTCCCCGGAGGATGTTACCAAGCAGACCTAC
ATCGTGCATTTCATTGACCGTAGCACCTCCTACATGCAGAAACTGCCAGG
TCCATCTGCAGCGAGACGCGCATGTGGATCTCACATCGCTTAAGGACCGG
CTCTCCCCGGAGGATGTTACCAAGCAGACCTACATCGTGCATTTCATTGA
CCGTAGCACCTCCTACGAAAAGCCAGTGGTAGCGAGCGGGCAATACAAGA
AAGGAGAATGGACCGTGTTGACGGGATGCGAGAAGATCCACACCGTGTAC
GTCGAATTGGACAGCAGTGAATAGGAAAAGCCAGTGGTAGCGAGCGGGCA
ATACAAGAAAGGAGAATGGACCGTGTTGACGGGATGCGAGAAGATCCACA
CCGTGTACGTCGAATTGGACAGCAGTGAATAG