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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 425..532
e-value: 2.8E-31
score: 110.3
coord: 313..424
e-value: 5.3E-36
score: 125.7 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 724..877
e-value: 8.0E-34
score: 119.6
coord: 533..652
e-value: 6.7E-35
score: 123.1
coord: 80..230
e-value: 2.8E-30
score: 107.9 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 653..723
e-value: 3.0E-17
score: 64.7
coord: 231..304
e-value: 6.8E-16
score: 60.3 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13812 | PPR_3 | coord: 258..319
e-value: 3.2E-11
score: 43.1
coord: 156..213
e-value: 2.7E-10
score: 40.2 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13041 | PPR_2 | coord: 340..387
e-value: 1.6E-8
score: 34.6
coord: 410..457
e-value: 3.9E-12
score: 46.2 |
| IPR002885 | Pentatricopeptide repeat | TIGRFAM | TIGR00756 | TIGR00756 | coord: 659..693
e-value: 1.1E-7
score: 29.5
coord: 168..202
e-value: 6.7E-5
score: 20.8
coord: 694..728
e-value: 0.0017
score: 16.4
coord: 589..622
e-value: 0.0013
score: 16.8
coord: 731..764
e-value: 6.3E-4
score: 17.8
coord: 801..834
e-value: 4.9E-4
score: 18.1
coord: 413..447
e-value: 9.3E-8
score: 29.8
coord: 239..272
e-value: 2.5E-8
score: 31.6
coord: 208..236
e-value: 0.002
score: 16.2
coord: 133..166
e-value: 5.0E-5
score: 21.2
coord: 308..341
e-value: 7.3E-6
score: 23.8
coord: 343..376
e-value: 1.1E-4
score: 20.2
coord: 449..482
e-value: 1.1E-5
score: 23.3
coord: 555..586
e-value: 1.2E-5
score: 23.2
coord: 624..654
e-value: 4.0E-5
score: 21.5
coord: 483..517
e-value: 8.7E-5
score: 20.5
coord: 274..307
e-value: 1.8E-6
score: 25.8
coord: 520..552
e-value: 9.3E-5
score: 20.4
coord: 378..412
e-value: 1.0E-6
score: 26.5 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF01535 | PPR | coord: 659..689
e-value: 4.3E-5
score: 23.5 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 764..798
score: 8.977 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 166..200
score: 10.643 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 481..515
score: 10.786 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 201..235
score: 10.468 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 728..763
score: 11.213 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 131..165
score: 11.115 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 551..585
score: 11.312 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 376..410
score: 12.31 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 341..375
score: 11.027 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 586..620
score: 10.216 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 271..305
score: 10.939 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 306..340
score: 12.09 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 411..445
score: 12.474 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 799..833
score: 11.29 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 834..864
score: 5.919 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 621..655
score: 10.468 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 657..691
score: 12.43 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 446..480
score: 12.014 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 692..726
score: 9.821 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 516..550
score: 11.455 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 236..270
score: 12.003 |
| IPR033443 | Pentacotripeptide-repeat region of PRORP | PFAM | PF17177 | PPR_long | coord: 485..640
e-value: 4.8E-8
score: 32.6
coord: 696..846
e-value: 3.5E-12
score: 46.1 |
| None | No IPR available | PANTHER | PTHR46128 | FAMILY NOT NAMED | coord: 99..254
coord: 232..391
coord: 477..590
coord: 713..863
coord: 581..742
coord: 362..493 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig2632.7189.1 ID=prot_H-paniculata_contig2632.7189.1|Name=mRNA_H-paniculata_contig2632.7189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=886bp
MVFRYISIAVKDSIHTVRRSSRARHIVAANFCRAKVSSTTDETAESWQVN
NLPQQRLEVGGHAEGRGGHSVERAQGGEVVQRNERGVDELKKISRHIVSR
LKRAGSQKNWEAASRILREALDHPDARVVVNVYVYTAAVSAAAKCGNWRA
ALEIMADMRREGVLPSVVTYTAAINACERSRQVKQAMSLLRSMRAENVMP
NVLTYFSAIKVCGSGGQWEQAILLLSEMQHEGIAPGAKTYNAAIQACGRG
GQWEKSLSLLEEMQGNGIDPDVWSYSPAIKACGDAKQWEKALSLLKEMRQ
KKVFPNVVAYSSAIKACGDSGEWEQALSLLREMPGEGVTPNRVSYNSTIT
ACAGGEQWEQALSLLREMSIKGIVPDYVSYNSTITACGECGQWEQALSVM
RNMQREGFAPDVVTYNSAIKACGTGEQWEQALSLLKEMPSKGIVPDALSY
NSAIKACGDSGQWEKALILLKDMRGDGVAPDSFSYNLAIKACGDGKQWES
ALTTLSDMRRGGVTPDAVSYISTINACADSGQWVPALSIFREMSSNGIVP
DAWGYSSAIMACGNGGQWEQALSLLREMERTGVVPTDRAYGSAIAACAKC
SQWKEAVSLLLEMERIGVVPNAWAYGSAIAACAKCGRWKEALSLLKEMQV
KSVAAPNVVCYSSTIEACGDAGQWEKALLLFREMQETGIAPDVVSYRSAI
SACAENGQWKPALSLLEEMRTERRVIPDESCYSSAIKACRKADQGWEKAL
TILEEMQREGLPPGVVPYSAAIDVCAHGLQWQKALSLVREMENRGAAPNL
ISYNSALKACELSGQWEHALPILREMEAKGVSPNGMSYSFAVRACASGNV
WHEATALLKEAKKGLPGVALRTHNDAIFFLREISR* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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