mRNA_H-paniculata_contig2631.7185.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2631.7185.1 vs. uniprot
Match: D7FMA7_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA7_ECTSI) HSP 1 Score: 342 bits (876), Expect = 3.100e-109 Identity = 165/278 (59.35%), Postives = 211/278 (75.90%), Query Frame = 3
Query: 204 MSTADTTATITMPELTTTPFPSNGQLLVEENEELVKASVAAVRADLDKTPAWSRAPTPTDDFLLMFLRSEMFCPEKAAGRYRKFWEVKVTVCGEDEAHLPIKAQSATQALKTQFIQLVPASKDVEGRQVVFLDVGNKDKSLCKHERIRAVWYVLLAALEDVETQRRGVCFVVSLKKAKLSRLDPKFDRLMMDSIQGTLPVRVGSINLCYPPSFFRVVWAIMSKIITKRVQDRIRLVPGTDQEVGAKLSNLVNPVDLPPPMGPKALDISSWLAQRERPE 1037
M D + +PELTTT PSNGQLL E EELV S+AA+RA+L K PAWSRAP PTDDFLLMFLRSE+F P KAA RYRKFW+VKV +CGED+A PIK + A L +F Q+VP SKD EGRQVV ++ G DK+L + R+RAVWYVLLAALEDVETQR+G CFVV+LK A++S++D KF+++++DSIQG+LPVRVGS+N+CYPPSFFR +W ++S + +RV+ R R + G D++V L+ V P +LPPP+G K LD WLA+R++ E
Sbjct: 1 MDRGDEAEEMVLPELTTTVLPSNGQLLAIETEELVMGSLAAMRANLKKVPAWSRAPPPTDDFLLMFLRSEVFKPHKAADRYRKFWKVKVGLCGEDKAAFPIKVEDARLGLDREFCQIVPGSKDREGRQVVLVNTGQADKTLDRKMRVRAVWYVLLAALEDVETQRKGFCFVVTLKTARISQVDQKFNKMVLDSIQGSLPVRVGSMNMCYPPSFFRWIWMVISTFLHERVRARFRFIYGEDEDVLEALTGTVAPENLPPPIGRKPLDFQGWLAERQKAE 278
BLAST of mRNA_H-paniculata_contig2631.7185.1 vs. uniprot
Match: D7FMA8_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA8_ECTSI) HSP 1 Score: 289 bits (739), Expect = 1.780e-89 Identity = 134/237 (56.54%), Postives = 181/237 (76.37%), Query Frame = 3
Query: 327 VRADLDKTPAWSRAPTPTDDFLLMFLRSEMFCPEKAAGRYRKFWEVKVTVCGEDEAHLPIKAQSATQALKTQFIQLVPASKDVEGRQVVFLDVGNKDKSLCKHERIRAVWYVLLAALEDVETQRRGVCFVVSLKKAKLSRLDPKFDRLMMDSIQGTLPVRVGSINLCYPPSFFRVVWAIMSKIITKRVQDRIRLVPGTDQEVGAKLSNLVNPVDLPPPMGPKALDISSWLAQRERPE 1037
++ADL PAWS AP+ TD+FLLMFLR+E+F P AA RYRKFW+ K+T+CGE++A LPIK + A AL+++F+QLVP ++D+EGRQVV + N DK+L + R+ +VWYVLLAALEDVETQRRG CFV K K S+ DP F +++M S+QG LPVR+GSIN+CYPP+FFRVVW I++ + +RV+ R+R++PGTD EV L +V P LPPPMGPK + S+WLA++ + +
Sbjct: 1 MKADLAANPAWSGAPSQTDEFLLMFLRAEVFSPSAAANRYRKFWKAKITLCGEEKAALPIKFEDARAALESEFVQLVPGTRDIEGRQVVMIVSSNMDKTLERRLRLLSVWYVLLAALEDVETQRRGFCFVGYQKAVKRSQADPTFVKMVMQSLQGALPVRIGSINICYPPTFFRVVWGIINPFLHERVKRRVRVIPGTDAEVLGVLGAIVPPDGLPPPMGPKPKEFSAWLAEQAQKD 237
BLAST of mRNA_H-paniculata_contig2631.7185.1 vs. uniprot
Match: A0A7S3P5Y9_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5Y9_9STRA) HSP 1 Score: 150 bits (378), Expect = 6.810e-37 Identity = 87/271 (32.10%), Postives = 153/271 (56.46%), Query Frame = 3
Query: 273 GQLLVEENEELVKASVAAVRADLDKTP---------AWSRAPTP-TDDFLLMFLRSEMFCPEKAAGRYRKFWEVKVTVCGEDEAHLPIKAQSATQ----ALKTQFIQLVPASKDVEGRQVVFLDVGNKDKSLCKHERI-RAVWYVLLAALEDV-ETQRRGVCFVVSLKKAKLSRLDPKFDRLMMDSIQGTLPVRVGSINLCYPPSFFRVVWAIMSKIITKRVQDRIRLVPGTDQEVGAKLSNL--VNPVDLPPPMGPKA-LDISSWLAQRE 1028
GQL E +E++ + +L+K P A + P T++F LMFLRSE+F + AA RY +W+ +V +CG ++A LP+ A + ALK F+ + D GR ++++ GN+DK+ E + RAVWYV+ AALE++ E Q+ G+ F+ AKL++ D ++++ +IQGTLPVR+ + ++C PP+FF+++ I +++R + R+ + G+ ++ KL+ + ++P +G A +D +W+ R
Sbjct: 16 GQLHPVETDEMIAQKLKQFEEELEKLPQDQKHGLQQAQEKCPAELTNEFKLMFLRSEVFNADLAAKRYAHYWDKRVEICGPEKAFLPLTLDGALRDDEVALKIGFVNYLAGCSDPHGRAILYVLPGNQDKTKYTRESMGRAVWYVIHAALEEMPEAQKHGIIFMAHPAGAKLAQFDRAMMKVVLSAIQGTLPVRLSAFHICQPPAFFKIILPIAKLFMSERTKKRLCIHFGSTAKICEKLTKTYGLTKANIPQTLGGDAKVDTPAWIETRR 286
BLAST of mRNA_H-paniculata_contig2631.7185.1 vs. uniprot
Match: A0A7S3L2B2_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2B2_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.830e-34 Identity = 83/269 (30.86%), Postives = 148/269 (55.02%), Query Frame = 3
Query: 273 GQLLVEENEELVKASVAAVRADLDKTP---------AWSRAPT-PTDDFLLMFLRSEMFCPEKAAGRYRKFWEVKVTVCGEDEAHLPIKAQSATQ----ALKTQFIQLVPASKDVEGRQVVFLDVGNKDKSLCKHER-IRAVWYVLLAALEDVETQRRGVCFVVSLKKAKLSRLDPKFDRLMMDSIQGTLPVRVGSINLCYPPSFFRVVWAIMSKIITKRVQDRIRLVPGTDQEVGAKLSNL-VNPVDLPPPMGPKAL-DISSWLAQRE 1028
GQ E +E++ + A++ K P A + P TD F L+FLRSE+F + AA RY K+W+ +V + G ++A LP+ A + AL + + D +GR +++++ G +DK+ E +RA+WY+L AA+E+ ETQ+ G+ FV +S++D ++++ SIQGT+PVR+ + + C PP+F ++V + +++R +DR+ G+ ++V KL + + D+P +G + D +W+ QR
Sbjct: 16 GQFHPVETKEMILEKLEDFEAEIKKLPEEDKKNLLEAEEKCPDLVTDSFKLIFLRSEVFNADLAAKRYAKYWDKRVEIFGPEKAFLPLTLDGALKDDDAALTIGYANFLHGHCDPQGRSIMYMEAGRQDKTKYSRESMVRAIWYMLHAAMENEETQKYGMLFVTYPGGVTMSQIDRGLIKILLPSIQGTIPVRLSAFHSCQPPTFLKLVLPFVKLFMSERTKDRLLFHFGSTEKVCRKLQSYGLRKEDIPQTLGGNVVVDTKAWIEQRR 284
BLAST of mRNA_H-paniculata_contig2631.7185.1 vs. uniprot
Match: A0A7S2GSM7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GSM7_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.600e-28 Identity = 89/285 (31.23%), Postives = 152/285 (53.33%), Query Frame = 3
Query: 225 ATITMPELTTTPFPSNGQLLVEENEELVKASVAAVRADL-----DKTPAWSRAPTPTDD-----FLLMFLRSEMFCPEKAAGRYRKFWEVKVTVCGEDEAHLPIKAQSA----TQALKTQFIQLVPASKDVEGRQVVFLDVGNKDKSLCKHERI-RAVWYVLLAALEDVETQRRGVCFVVSLKKAKLSRLDPKFDRLMMDSIQGTLPVRVGSINLCYPPSFFRVVWAIMSKIITKRVQDRIRLVPGTDQEVGAKLSNLVNPVD-LPPPMGPKA-LDISSWLAQRE 1028
AT++ E+ + +G+ V ++EE+VK + + +L D+ PA A T D +FLR E F E+AA R +W+ K+ G +++ +P+ +A T AL ++L+P + D GR ++F D+ D ++ E + RA+WY+LLAA+ED TQ RG FV+ LK++ L + D K +++ +P+R S ++C+P + F + I+ ++ KR++ R+ + GT++EV +L P D +P MG K LD WL+ R
Sbjct: 25 ATMSEEEVEQSWADMHGKCAVLDDEEIVKRGLDEMEKELNEISCDEKPALLMAETRCPDQCSSEHKRLFLRREAFDAERAARRLVDYWQQKLKWFGPEKSFIPLALDNAMREDTAALNRGLLRLLPVT-DSFGRCILFCDISLHDATMYSMESMMRAIWYMLLAAIEDETTQNRGAIFVLYLKQSTLDQFDRKLLHRLLELEDKFVPIRFRSFHICHPGACFDIERPILQFLLGKRLRARMDVHQGTEEEVLIELDEYGMPPDRVPSIMGGKVVLDHERWLSNRR 308
BLAST of mRNA_H-paniculata_contig2631.7185.1 vs. uniprot
Match: A0A7S1FTJ5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FTJ5_9STRA) HSP 1 Score: 124 bits (312), Expect = 5.210e-28 Identity = 84/274 (30.66%), Postives = 137/274 (50.00%), Query Frame = 3
Query: 273 GQLLVEENEELVKASVAAVRADLDKTP---------AWSRAPTP-TDDFLLMFLRSEMFCPEKAAGRYRKFWEVKVTVCGEDEAHLPIKAQSATQ----ALKTQFIQLVPASKDVEGRQVVFLDVGNKD------KSLCKHERIRAVWYVLLAALEDVETQRRGVCFVVSLKKAKLSRLDPKFDRLMMDSIQGTLPVRVGSINLCYPPSFFRVVWAIMSKIITKRVQDRIRLVPGTDQEVGAKLSN--LVNPVDLPPPMGPKALDISSWLAQRE 1028
GQ E +E+V + ++ P A R P TD F LMFLRSE+F + A RY ++WE +V V G ++A LP+ A + L F+ + D GR ++F D D KS+C RA+WY+L + LE+ ETQ++GV F++ K +LD K ++ +S++ +P+RV ++++C+PP F +V+ I+ + + ++ R RL G +EV L L + P G +D+ W+A+R
Sbjct: 17 GQRHPVETDEIVSRKLKEFEEEVKNIPDEEKSCLLQAQERCPQLLTDGFKLMFLRSEVFHIDLATKRYVRYWEKRVDVFGPEKAFLPLTVDGALRDDHFTLTKGFMNMT-GKCDPSGRSILFGDPSKMDPGAYEAKSMC-----RALWYILHSLLENEETQKKGVVFLLWPHNFKPWQLDKKLLKMNSESVRACIPLRVSALHVCHPPKIFAIVFPILKMFMGEVLRKRFRLHSGNTEEVLKNLEKWGLTRDIVASPIGGDVEIDMHGWIAKRR 284
BLAST of mRNA_H-paniculata_contig2631.7185.1 vs. uniprot
Match: A0A7S2KWX8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KWX8_9STRA) HSP 1 Score: 116 bits (290), Expect = 4.200e-25 Identity = 67/225 (29.78%), Postives = 126/225 (56.00%), Query Frame = 3
Query: 393 LMFLRSEMFCPEKAAGRYRKFWEVKVTVCGEDEAHLPIKAQSATQ----ALKTQFIQLVPASKDVEGRQVVFLDVGNKDKSLCKHER-IRAVWYVLLAALEDVETQRRGVCFVVSLKKAKLSRLDPKFDRLMMDSIQGTLPVRVGSINLCYPPSFFRVVWAIMSKIITKRVQDRIRLVPGTDQEVGAKLSNLVNPVD-LPPPMGPKAL----DISSWLAQRERPE 1037
LMFLR E+F + AA R +W ++ + GE++A +K ++A + A++ ++++P + D EGR + F D +++ L E +R +WY ALE Q+RG+ V + AK S D ++ DS++ LP+R+GS +C+PP+FF +++ I+ + +++RI + G+D++V KL++ P +P +G + + +WL +R++ E
Sbjct: 63 LMFLRCELFNVDLAAKRLCNYWTARLVLFGEEKAFQELKLETAMKDDMIAIELGIVKVLP-NPDEEGRTICFFDPSLQNRELYTRESLVRCLWYCFHVALERESAQQRGIILCVYPRNAKHSHFDRGLAKMFSDSMKRCLPIRIGSFQVCHPPTFFVIIFPILKLFLGAYLRNRICVNGGSDEKVLKKLNSCGIPSSSIPEELGGEVVVDNETWKAWLKERKQSE 286
BLAST of mRNA_H-paniculata_contig2631.7185.1 vs. uniprot
Match: A0A6V2CPB1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2CPB1_9STRA) HSP 1 Score: 114 bits (285), Expect = 7.250e-24 Identity = 73/222 (32.88%), Postives = 123/222 (55.41%), Query Frame = 3
Query: 393 LMFLRSEMFCPEKAAGRYRKFWEVKVTVCGEDEAHLPIKA-----QSATQALKTQFIQLVPASKDVEGRQVVFLDVGNKDKSLCKHER-IRAVWYVLLAALEDVETQRRGVCFVVSL-KKAKLSRLDPKFDRLMMDSIQGTLPVRVGSINLCYPPSFFRVVWAIMSKIITKRVQDRIRLVPGTDQEVGAKLSNLVNPVD-LPPPMGPKA-LDISSWLAQRER 1031
LMFLRSE+F + AA RY K+W ++ + GE++A PI + Q AL FI+L+ D GR ++++D N D + E +RAVWY++ AALE Q++G+ F+V + LS D ++ +SI +P+R G+I+L P F V+ I+ ++ R+++ +++ G++ ++ L+ L D LP +G K D +WLA+R +
Sbjct: 131 LMFLRSELFDVQPAAERYAKYWNKRIELFGEEKACKPILSLNDALQDDESALNVGFIKLLDGVTDDRGRALMWIDPANLDSTKYSRESMVRAVWYIMHAALESETAQQKGLVFLVYIGNNPALSVFDRPLISMVAESISYLIPLRAGAIHLFPTPLVFSVLLNIIKYVLGSRLRNTLKVTGGSNDKILDTLNKLGVTTDVLPIEVGGKVDHDHDAWLAKRRK 352
BLAST of mRNA_H-paniculata_contig2631.7185.1 vs. uniprot
Match: A0A7S2E7L7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E7L7_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.430e-19 Identity = 74/271 (27.31%), Postives = 136/271 (50.18%), Query Frame = 3
Query: 291 ENEELVKASVAAVRADLDK---------TPAWSRAPT--PTDDFLLMFLRSEMFCPEKAAGRYRKFWEVKVTVCGEDEAHLPIKAQSAT----QALKTQFIQLVPASKDVEGRQVVFLDVGNKDKS-LCKHERIRAVWYVLLAALEDVETQRRGVCFVVSLKKAKLSRLDPKFDRLMMD----SIQGTLPVRVGSINLCYPPSFFRVVWAIMSKIITKRVQDRIRLVPGTDQEVGAKLSNL-VNPVDLPPPMGPKA-LDISSWLAQRERPE 1037
E+ E++ +++ ++DK A R P T + LMFLRS+ F + AA R+ +W ++ + GE +A P+ + +AL T F +L+ A DV GR ++++D D S + +R +WYV+ ALE+ ETQ+RG+ FV + R +FDR+++ S+Q +P+ +G++ + + P V ++ ++ + ++++V G++Q + KL + D+P +G D SW+ QR E
Sbjct: 31 ESNEIITEALSLFNEEIDKLADKDREGIAKAEKRCPEIINTKEHKLMFLRSDNFMVDLAAKRFANYWNKRIELFGE-KAFSPLTISDSLNNDKEALNTAFCKLLKAKDDV-GRSIIYMDPALLDDSKYTRDSMLRVIWYVVHVALEEKETQQRGIIFVNNNGNNPEIR---QFDRVLVGKIAHSLQHEIPIIIGALYILHIPRLLVVFMNVIKHVLGSGISKQMKVVGGSNQMILQKLDKHGMYKEDMPVDIGGDLKYDNESWVRQRVEAE 296
BLAST of mRNA_H-paniculata_contig2631.7185.1 vs. uniprot
Match: A0A7S4AGI2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AGI2_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.980e-14 Identity = 72/277 (25.99%), Postives = 133/277 (48.01%), Query Frame = 3
Query: 279 LLVEENEELVKASVAAVRADLDKT---PAWSRAP-------------TPTDDFLLMFLRSEMFCPEKAAGRYRKFWEVKVTVCG----EDEAHLPIKAQSATQALKTQFIQLVPASKDVEGRQVVFLDVGNKDKSLCKHERIRAVWYVLLAALEDVETQRRGVCFVVSLKKAKLSRLDPKFDRLMMDSIQGTLPVRVGSINLCYPPS-FFRVVWAIMSKIITKRVQDRIRLVPGTDQEVGAKLSNLVNPVDLPPPMGP---KALDISSWLAQRERPE 1037
L E EL+ ++A ++ +LD PA+ +A T++F L FLR E+F AA R K+ ++ V + G + + L ++ Q L+ + Q+ P +D GR+V+ + VG R+++ +Y ++A ED+E+Q++GV F+V + ++ + DR + D P+R+ +++ C P + FF ++ +IM++ + K + R++ G E+ L + PVDL P K + WL R+ E
Sbjct: 230 LAPNETPELLTLAIAGLKQELDAIAYKPAYDKAQIYAQMPQFSRTSYVNTNEFRLKFLRCELFDIRMAAVRLIKYLDLMVELYGLFALQRKVTLKDFSKHEMQILRAGYFQMFPF-RDRSGRRVMCI-VGEMGIKFDPTLRLKSYFYFWMSASEDIESQQKGVIFLVWPGTDGMRQIPNQTDRTLHDKCNAASPIRIAAVHFCLPNTPFFHLLRSIMARTLGKTYRLRLKFHVGEGVEMQYVLKSYGIPVDLTPLTDSGNIKTTYLKQWLRLRKIIE 504 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2631.7185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2631.7185.1 >prot_H-paniculata_contig2631.7185.1 ID=prot_H-paniculata_contig2631.7185.1|Name=mRNA_H-paniculata_contig2631.7185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=279bp MSTADTTATITMPELTTTPFPSNGQLLVEENEELVKASVAAVRADLDKTPback to top mRNA from alignment at H-paniculata_contig2631:5517..12726+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2631.7185.1 ID=mRNA_H-paniculata_contig2631.7185.1|Name=mRNA_H-paniculata_contig2631.7185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7210bp|location=Sequence derived from alignment at H-paniculata_contig2631:5517..12726+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2631:5517..12726+ >mRNA_H-paniculata_contig2631.7185.1 ID=mRNA_H-paniculata_contig2631.7185.1|Name=mRNA_H-paniculata_contig2631.7185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1674bp|location=Sequence derived from alignment at H-paniculata_contig2631:5517..12726+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |