prot_H-paniculata_contig26277.7173.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26277.7173.1
Unique Nameprot_H-paniculata_contig26277.7173.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length213
Homology
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BLAST of mRNA_H-paniculata_contig26277.7173.1 vs. uniprot
Match: D7FWG2_ECTSI (SAM-dependent methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG2_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 6.270e-49
Identity = 111/214 (51.87%), Postives = 136/214 (63.55%), Query Frame = 0 
Query:    1 MIQILSEGGRDSSSSSSVGKKSVDKSGSALLTRSALSDLKIDRLVLQPMDARLEYVHNLRMWLRENGWRITQESIASILGKGGRRAFLTLRADSTARHRPPQSKVTTTILS--DWPGG--HQEGADWLGEFLPARATTDSGQLLPHGNLHTRRGVGGREEALTFLAYLKHQRNWLRAIERARRSSSSSFTEEKQEGGRLGDGLDQAIAAVEESL 210
            MIQILS    DSS   +   +S    G       ALS L + RLVLQPMDARLEY+ +LR+WLRENGWRITQE I S LGKGGR AFLTLRAD T   R  +S       S  +WP G   +E +DWLG+FLP+R T DS QL   G     RG   R+EA TFLAYL+HQR+WL AIERAR  +S   T E+Q+   + +G+D  + AVE+++
Sbjct:  240 MIQILSTSTSDSSVDVTDSPESSHGRGVP-----ALSRLGVRRLVLQPMDARLEYMRDLRVWLRENGWRITQEKIVSTLGKGGRHAFLTLRADCTETLRSLKSDQGVPPFSGPEWPTGMPQEEWSDWLGDFLPSR-TMDSDQLRIGG-----RGTE-RQEASTFLAYLRHQRDWLTAIERARSRTSRGVTAERQDSTAVSEGVDSVLRAVEDAI 441
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BLAST of mRNA_H-paniculata_contig26277.7173.1 vs. uniprot
Match: A0A6H5JHI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI9_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 5.970e-45
Identity = 101/213 (47.42%), Postives = 130/213 (61.03%), Query Frame = 0 
Query:    1 MIQILSEGGRDSSSSSSVGKKSVDKSGSALLTRSALSDLKIDRLVLQPMDARLEYVHNLRMWLRENGWRITQESIASILGKGGRRAFLTLRADSTARHRPPQSKVTTTILS-DWPGGHQEG--ADWLGEFLPARATTDSGQLLPHGNLHTRRGVGGREEALTFLAYLKHQRNWLRAIERARRSSSSSFTEEKQEGGRLGDGLDQAIAAVEESL 210
            +IQILS    DSS  ++  ++S    G+     SALS L + RLVLQPMDARLEY+ +LR+WLR NGWRI QE I S LGKGGR AFLTLRAD          +  +     +WP G  +G  +DWLG+FLP+R T DS QL   G          R+EA TFLAYL+HQR+WL AIERAR  +S   T E Q+   + + +   + AVE+++
Sbjct:  243 IIQILSASTSDSSGDAANSQESSHGRGA-----SALSRLGVRRLVLQPMDARLEYMRDLRVWLRGNGWRIAQEKIVSTLGKGGRHAFLTLRADCMEMSSVKSDQGVSPFSGPEWPAGMPQGEWSDWLGDFLPSR-TMDSNQLRDGGR------DTERQEAFTFLAYLRHQRDWLTAIERARSRTSRRVTAESQDSTAVSEAVGSVLRAVEDAI 443
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26277.7173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWG2_ECTSI6.270e-4951.87SAM-dependent methyltransferase n=1 Tax=Ectocarpus... [more]
A0A6H5JHI9_9PHAE5.970e-4547.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26277contigH-paniculata_contig26277:423..2041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26277.7173.1mRNA_H-paniculata_contig26277.7173.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26277 411..2041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26277.7173.1 ID=prot_H-paniculata_contig26277.7173.1|Name=mRNA_H-paniculata_contig26277.7173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp
MIQILSEGGRDSSSSSSVGKKSVDKSGSALLTRSALSDLKIDRLVLQPMD
ARLEYVHNLRMWLRENGWRITQESIASILGKGGRRAFLTLRADSTARHRP
PQSKVTTTILSDWPGGHQEGADWLGEFLPARATTDSGQLLPHGNLHTRRG
VGGREEALTFLAYLKHQRNWLRAIERARRSSSSSFTEEKQEGGRLGDGLD
QAIAAVEESLSLA
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