mRNA_H-paniculata_contig2621.7163.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2621.7163.1 vs. uniprot
Match: D7FWU7_ECTSI (EF-hand, calcium binding motif n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU7_ECTSI) HSP 1 Score: 240 bits (612), Expect = 2.160e-70 Identity = 145/265 (54.72%), Postives = 162/265 (61.13%), Query Frame = 1
Query: 1 QAKVKAASEKVPQRTHEENEKLLRNKILGSIGGGPFELLRAFRKMHRGRGTVVDLDDFREAVSTFSLGLGEKEVQKFFEVFDADGSGGIDFEARECGDIKIDLCIAEGETQEEQVCD-------------PTNLPQVA---------FPTPTQKAQDRVTRSFHHHAGQMTSEELHKVLREKLLSTVKPGGATLLKTYRNLHRSDTGKAGVELADFKEAVHRYGMGVTDAQVEELFQRYDKDGSGDIDFHEFLKLIVYSETLDPE 729
QAKVKAASE+VP+RT ENE+LLR KILGSIGGGPF+LLRAFRKMHRGRGTVVDL+DFREAV TFSLGLGE EV+ FF+ FDADGSGGIDFE + C G T D P +P VA TP +AQ+RVTR+F AG GVEL DFKEAVHRYGMGVTDAQVE+LF+RYDKDGSGDIDFHEFLKLI+Y+E L P+
Sbjct: 244 QAKVKAASERVPERTMAENEQLLRQKILGSIGGGPFQLLRAFRKMHRGRGTVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFE---------EFCAWVGGTDAAGAADGFLLPDSKTTKSSPGFIPGVAGEGGWDDDTTKTPAMRAQERVTRAFREQAG-----------------------------------------GVELGDFKEAVHRYGMGVTDAQVEKLFRRYDKDGSGDIDFHEFLKLIMYAEDLAPQ 458
BLAST of mRNA_H-paniculata_contig2621.7163.1 vs. uniprot
Match: A0A836C9J2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9J2_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.170e-11 Identity = 60/215 (27.91%), Postives = 94/215 (43.72%), Query Frame = 1
Query: 91 IGGGPFELLRAFRKMH---RGRGTVVDLDDFREAVSTFSLGLGEKEVQKFFEVFDADGSGGIDFEARECGDIKIDLCIAEGETQEEQVCDPTNLPQVAFPTPTQKAQDRVTRSFHHHAGQMTSEELHKVLREKLLSTVKPGGATLLKTYRNLHRSDTGKAGV-ELADFKEAVHRYGMGVTDAQVEELFQRYDKDGSGDIDFHEFLKLIVYSETLD 723
+ GG FE+LRAFR GR +D +FR+++ LGL E E+++ F FD D SG ID+ + D+ + L F + +E LR V G +L+ +RN G+A + DF ++ + G+ ++DA+ + LFQ++D+DGSG IDF EF + S T +
Sbjct: 575 VKGGSFEMLRAFRHFRPAGAGRRLFLDYAEFRDSIKQNGLGLSEMEMRELFAHFDTDNSGKIDYSLK---DLSLTLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEFRQW---LEGKEAVTGLRR-----VSGGQYEVLRAFRNFKVGMKGRAALLNEQDFNTSIKQLGIKLSDAESKALFQKFDEDGSGMIDFAEFRSWVTASATAN 778
BLAST of mRNA_H-paniculata_contig2621.7163.1 vs. uniprot
Match: A0A2R5GZJ7_9STRA (Ras and EF-hand domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZJ7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 7.990e-11 Identity = 56/225 (24.89%), Postives = 104/225 (46.22%), Query Frame = 1
Query: 58 EKLLRNKILGSIGGGPFELLRAFRKMHR----GRGTVVDLDDFREAVSTFSL-GLGEKEVQKFFEVFDADGSGGIDFEARECGDIKIDLCIAEGETQEEQVCDPTNLPQVAFPTPTQKAQDRVTRSFHHHAGQMT-SEELHKVLREKLLSTVKPGGATLLKTYRNLHRSDTGKAGVELADFKEAVHRYGM-GVTDAQVEELFQRYDKDGSGDIDFHEFLKLIVYS 711
E LL +K++ GG +L+ FRK+ G + ++F+E ++ F L GL E++ +K F +D DGSGGI + IK + + D + A R+ + G T S + ++L++K+ +K G +L +R G + + +F + R G+ G+++ + LF R+D D +G I++ EF++ ++ S
Sbjct: 34 ETLLLDKLMQRSKGGSNGILQQFRKIDMSVGDGEEAEISFENFKECLAKFGLDGLREEDARKLFNKYDTDGSGGISLQEFANNVIKATQINSNIGRSNTDIQDAKRARERA----------RIMKQTAMRTGWKTVSVDAERLLQQKIEERIKGGPNSLRLAFRKFCSDRRGDSAISFEEFGSTLARMGLEGLSEDDLRVLFDRFDDDKNGTIEYSEFVEFVLKS 248
BLAST of mRNA_H-paniculata_contig2621.7163.1 vs. uniprot
Match: T0R0B2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R0B2_SAPDV) HSP 1 Score: 64.3 bits (155), Expect = 3.500e-8 Identity = 55/219 (25.11%), Postives = 92/219 (42.01%), Query Frame = 1
Query: 61 KLLRNKILGSIGGGPFELLRAFRKMHRGRGTVVDLDDFREAVSTFSLGLGEKEVQKFFEVFDADGSGGIDFEARECGDIKIDLCIAEGETQEEQVCDPTNLPQVAFPTPTQKAQD----RVTRSFHHHAGQMTSEELHKVLREKLLSTVKPGGATLLKTYRNLHRSDTGKAGVELADFKEAVHRYGMGVTDAQVEELFQRYDKDGSGDIDFHEFLKLIV 705
K +R KI G +AF + G + LD+F E + L + Q+ F +FDA+ SG +D G D + Q E+ QK +D R + H T E++ + LREK+ + + ++ +G+ +F +A+ G+ + A +LFQ+YD DGSGDID +EF++ ++
Sbjct: 194 KRIREKIDQRTSKGSDRFRQAFMIFTKASG--ITLDEFHEGLLRMGFRLTSSQAQELFAMFDANHSGDLDLNEFVQGITIDDYSATYIQAQIER----------------QKREDVRRLRYAAAVHSVEASWTIEDMERKLREKIEQHTSRSSDCFRQALQIFKKT----SGIRAHEFHDALAELGLDLPRASTMKLFQKYDLDGSGDIDLNEFVRGVL 390
BLAST of mRNA_H-paniculata_contig2621.7163.1 vs. uniprot
Match: A0A7S3USD5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USD5_HETAK) HSP 1 Score: 62.8 bits (151), Expect = 8.920e-8 Identity = 53/212 (25.00%), Postives = 100/212 (47.17%), Query Frame = 1
Query: 58 EKLLRNKILGSIGGGPFELLRAFRKMHRGRGTVVDLDDFREAVSTFSLGLGEKEVQKFFEVFDADGSGGIDFEARECGDIKIDLCIAEGETQEEQVCDPTNLPQVAFPTPTQKAQDRVTRSFHHHAGQMTSEELHKVLREKLLSTVKPGGATLLKTYRNLHRSDTGKAGVELADFKEAVHRYGMGVTDAQVEELFQRYDKDGSGDIDFHEFL 693
++LLR KILGS+ GG EL RAFRK+H G G V+ +F AV ++ ++++ F F + GG+D+ + C + Q T++ + P P +A +R G + E + +V+R ++ S+ L + + HR+ + + + F+ + + + TD + +LF YD +G +++ +F+
Sbjct: 9 DRLLREKILGSLSGGGHELQRAFRKIHTGPGNVITEAEFIRAVKSYGFSFDDEDIAMIFGSFADERKGGVDYPS---------FCTWIMDAGGHQS---TSIAALQGPEP--EAPIDKSRKL----GSV--EGIKEVIRRRVNSSP-DAPHHLSRAFLKGHRAQGLR--IPFSAFRAGLAEFAVAGTDLALLDLFAEYDPGRTGTVNYQQFV 197
BLAST of mRNA_H-paniculata_contig2621.7163.1 vs. uniprot
Match: A0A1X7TFK8_AMPQE (Uncharacterized protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TFK8_AMPQE) HSP 1 Score: 57.8 bits (138), Expect = 1.480e-6 Identity = 35/102 (34.31%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 388 TQKAQDRVTRSFHHHAGQMTSEELHKVLREKLLSTVKPGGATLLKTYRNLHRSDTGKAGVELADFKEAVHRYGMGVTDAQVEELFQRYDKDGSGDIDFHEFL 693
T + D + R + A + TS+ L K LR K L+ G L + +R + D G + +FK+ +H YG+ +TD++ +++FQ++D+D +G IDF EFL
Sbjct: 3 THRQDDEMKRKCNEAAAK-TSDPLEK-LRLKCLARGASGIKGLGRVFRIM--DDDGSRSLSYDEFKKGLHDYGLSLTDSESKQMFQKFDQDKNGSIDFDEFL 100
BLAST of mRNA_H-paniculata_contig2621.7163.1 vs. uniprot
Match: A0A482V2G1_9ARCH (EF-hand domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V2G1_9ARCH) HSP 1 Score: 55.5 bits (132), Expect = 4.850e-6 Identity = 43/181 (23.76%), Postives = 79/181 (43.65%), Query Frame = 1
Query: 169 DFREAVSTFSLGLGEKEVQKFFEVFDADGSGGIDFEARECGDIKIDLCIAEGETQEEQVCDPTNLPQVAFPTPTQKAQDRVTRSFHHHAGQMTSEELHKVLREKLLSTVKPGGATLLKT---YRNLHRSDTGKAGVELADFKEAVHRYGMGVTDAQVEELFQRYDKDGSGDIDFHEFLKLI 702
+F+EA+ + + ++ FE FD D SG +D+ K L + + E+V P + R+ R + G PG + K + ++ R+ G + ++ +F+EA+ R + ++ + ++ LFQRYD D SG+ID+ EFL+L+
Sbjct: 2 EFKEALRMLKVDMRTADIDLLFERFDQDRSGELDY--------KEFLELIGMARRSERVSAPVSSSSSRVRVEVDAILQRIRRGIEEYLG--------------------PGSGSARKVKEVFADIDRN--GNSRIDQKEFREAMSRLRVNLSSSDIDMLFQRYDLDRSGEIDYKEFLQLL 152
BLAST of mRNA_H-paniculata_contig2621.7163.1 vs. uniprot
Match: A0A0N5CJC1_THECL (Uncharacterized protein n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5CJC1_THECL) HSP 1 Score: 56.2 bits (134), Expect = 5.610e-6 Identity = 30/98 (30.61%), Postives = 55/98 (56.12%), Query Frame = 1
Query: 436 GQMTSEELHKVLREKLLSTVKP-----------GGATLLKTYRNLH-RSDTGKAGVELADFKEAVHRYGMGVTDAQVEELFQRYDKDGSGDIDFHEFL 693
G M+ EEL + ++L + P G A + R+ D+G ++L +F++ +H + + + + ++E+LF+++DKDGSG IDF+EFL
Sbjct: 13 GTMSEEELKRKASKELKTAKDPLERLRLQCLIRGNAGIKSLGRSFRIMDDSGDRKLDLEEFRKGLHNFSVNIPNEEIEQLFKKFDKDGSGYIDFNEFL 110
BLAST of mRNA_H-paniculata_contig2621.7163.1 vs. uniprot
Match: A0A8K1CRL3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRL3_PYTOL) HSP 1 Score: 57.8 bits (138), Expect = 5.730e-6 Identity = 47/192 (24.48%), Postives = 87/192 (45.31%), Query Frame = 1
Query: 145 RGTVVDLDDFREAVSTFSLGLGEKEVQKFFEVFDADGSGGIDFEARECGDIKIDLCIAEGETQEEQVCDPTNLPQVAFPTPTQKAQDRVTRSFHHHAGQM-----TSEELHKVLREKLLSTVKPGGATLLKTYRNLHRSDTGKAGVELADFKEAVHRYGMGVTDAQVEELFQRYDKDGSGDIDFHEFLKLIV 705
+ T + +F A++ L L E+++Q+ FE+FD D SG +D G + D T +++ QK ++ R + A Q T E+ ++LREK+ + +R + + G++ +F A+ G+ + +Q + LF+R+D DGSG+ID EF+ ++
Sbjct: 390 KSTGITPPEFNTAMTKLGLKLTERQLQELFELFDFDHSGDLDLNEFVQGVMLDDASTKVWHTIKDR----------------QKVEES-RRKLYSMAVQSVQSGWTIAEIEQMLREKIEQRTSRSSDCFRQAFRIFKKVN----GIKPEEFHAALESIGLTLDRSQADVLFERFDTDGSGEIDLDEFIHGVL 560
BLAST of mRNA_H-paniculata_contig2621.7163.1 vs. uniprot
Match: A0A2D4BW89_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW89_PYTIN) HSP 1 Score: 57.0 bits (136), Expect = 9.860e-6 Identity = 52/231 (22.51%), Postives = 102/231 (44.16%), Query Frame = 1
Query: 49 EENEKLLRNKILGSIGGGPFELLRAFRKMHRGRGTVVDLDDFREAVSTFSLGLGEKEVQKFFEVFDADGSGGIDFEARECGDIKIDLCIAEGETQEEQVCDPTNLPQVAFPTPTQKAQDRVTRSFHHH---------AGQMTSEELHKVLREKLLSTVKPGGATLLKTYRNLHRSDTGKAGVELADFKEAVHRYGMGVTDAQVEELFQRYDKDGSGDIDFHEFLKLIVYSE 714
+E E+ L K+ + G +AFR + G + +FR+ +S + L +++ ++ F FD D +G I+ + + E +E +L + TP++ D + H H +T +++ LREKL + +R +S G+ +F A+ + G+ +T Q++ELF+ +D D SGD+D +EF++ ++ +
Sbjct: 260 DEIERCLSRKLEEKVSRGTDRFRQAFRFFTKSEG--ITYPEFRKRLSLLQIHLSDRKCREVFAHFDLDKNGTIEL-------AEFTTMLFRSEEEE------ASLLRRRAGTPSRDV-DEHGHTVHAHRLSDFDVEAGSSLTIQQILSKLREKLEQHTSKETDRFRQAFRIFSKS----TGITPTEFNVAMVKLGLKLTSRQLDELFELFDFDKSGDLDXNEFVQGVMLDD 470 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2621.7163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2621.7163.1 >prot_H-paniculata_contig2621.7163.1 ID=prot_H-paniculata_contig2621.7163.1|Name=mRNA_H-paniculata_contig2621.7163.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=243bp QAKVKAASEKVPQRTHEENEKLLRNKILGSIGGGPFELLRAFRKMHRGRGback to top mRNA from alignment at H-paniculata_contig2621:197..10713+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2621.7163.1 ID=mRNA_H-paniculata_contig2621.7163.1|Name=mRNA_H-paniculata_contig2621.7163.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10517bp|location=Sequence derived from alignment at H-paniculata_contig2621:197..10713+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2621:197..10713+ >mRNA_H-paniculata_contig2621.7163.1 ID=mRNA_H-paniculata_contig2621.7163.1|Name=mRNA_H-paniculata_contig2621.7163.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1458bp|location=Sequence derived from alignment at H-paniculata_contig2621:197..10713+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |