prot_H-paniculata_contig26207.7162.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26207.7162.1
Unique Nameprot_H-paniculata_contig26207.7162.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length167
Homology
BLAST of mRNA_H-paniculata_contig26207.7162.1 vs. uniprot
Match: A0A6H5KY81_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY81_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 9.330e-31
Identity = 64/161 (39.75%), Postives = 96/161 (59.63%), Query Frame = 0
Query:    6 KISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLINTKCTQSHG 166
            K +E G +  FK R+VA G  QI GI F  +SS  P A SIK ++++A  +  +L H D +QAY+   +++EI++   E H       G+  ++++A+YGL Q+GR W  +    L   G+EQ   D CVF K+VDGEVV +I+IYVDD+L+     +  G
Sbjct:  156 KTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPPAASIKTMIAVATEKGKKLDHWDVKQAYIHATLNEEIYLRFPEGH---GSMSGKVVKVERALYGLKQSGREWGVEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREG 313          
BLAST of mRNA_H-paniculata_contig26207.7162.1 vs. uniprot
Match: A0A6H5KFN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN5_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 6.050e-29
Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 0
Query:    9 EDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 157
            ++GK++KFK RLVA G  QI  + +  +SSP P++ SIK++L++A  +   L H D +QAY    +D+E+F+++        D   +  + ++AIYGL Q+GR W       L   GFEQ  AD CVF K+VD  VV II+IYVDD+L+
Sbjct:   94 DEGKIDKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLP---AGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV 239          
BLAST of mRNA_H-paniculata_contig26207.7162.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 120 bits (302), Expect = 9.730e-29
Identity = 62/168 (36.90%), Postives = 105/168 (62.50%), Query Frame = 0
Query:    3 YKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEAR---RLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFH-KIVDGEVVAIIIIYVDDLLINTKCTQSHG 166
            YK K++ DGKVE++K RLVA G  QI+G  +QE  SP      ++M  +LAA Q+W L  +D   A+L   + +E+++E+ + +    ++P  +R   +L K++YGL QA R W++K+T  +   GF+QS++D  +F  K  +G+ +A+++ YVDD+LI +   Q+  
Sbjct:  207 YKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQNWRLSQLDINNAFLNGELTEEVYMELPQGYTFKREYPTSSRLVCKLHKSLYGLKQASRAWNSKLTTSVLKYGFKQSNSDYSLFTMKTHNGDFIALLV-YVDDILIASSSIQAKN 373          
BLAST of mRNA_H-paniculata_contig26207.7162.1 vs. uniprot
Match: UPI0008494023 (uncharacterized mitochondrial protein AtMg00810 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI0008494023)

HSP 1 Score: 119 bits (297), Expect = 1.170e-28
Identity = 61/168 (36.31%), Postives = 105/168 (62.50%), Query Frame = 0
Query:    3 YKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEAR---RLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVF-HKIVDGEVVAIIIIYVDDLLINTKCTQSHG 166
            YK K++ DGKVE++K RLVA G  QI+G  +Q+  SP     +++M  +LAA Q+W L  +D   A+L   + +E+++E+ + +    ++P  +R   +L K++YGL QA R W++K+T  +   GF+QS++D  +F  K   G+ +A+++ YVDD+LI +   Q+  
Sbjct:   32 YKVKLNADGKVERYKARLVAKGYNQIEGFDYQKTFSPVVRQTTVRMFFALAATQNWRLSQLDINNAFLNGELTEEVYMELPQGYTIKGEYPTSSRLVCKLHKSLYGLKQASRAWNSKLTTSVLKYGFKQSNSDYSLFIMKTHRGDFIALLV-YVDDILIASTSIQAEN 198          
BLAST of mRNA_H-paniculata_contig26207.7162.1 vs. uniprot
Match: A0A6H5K3C5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C5_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 1.550e-28
Identity = 62/156 (39.74%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    6 KISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPD----FPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 157
            K +E G +  FK R+VA G  QI GI F  +SS  P+A SIK ++++A  +  +L H D +QAY+   + +EI++       ++P+      G+  ++++A+YGL Q+GR W  +    L   G+EQ   D CVF K+VDGEVV +I+IYVDD+L+
Sbjct:  512 KTNEKGLIVDFKARMVARGFSQIPGIDFHRSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYL-------RFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV 660          
BLAST of mRNA_H-paniculata_contig26207.7162.1 vs. uniprot
Match: A0A6H5JRC6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC6_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 1.700e-28
Identity = 64/152 (42.11%), Postives = 94/152 (61.84%), Query Frame = 0
Query:    6 KISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 157
            K +++GK+EKFK RLVA G  QI  + +  + SP P +VSIK++L++A+ +   L H D +QAY    +D+E+F+++        D   +  + ++AIYGL  +GR W       L   GFEQ  AD CVF K+VD  VV II+IYVDD+L+
Sbjct:  425 KTNKEGKIEKFKARLVARGLWQIPNVDYFHSFSPCPLSVSIKLMLAVASKKGMNLNHWDVKQAYTHATLDEEVFLKLP---AGCGDKSHKIAKAERAIYGLKHSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV 573          
BLAST of mRNA_H-paniculata_contig26207.7162.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 2.340e-28
Identity = 62/156 (39.74%), Postives = 95/156 (60.90%), Query Frame = 0
Query:    6 KISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPD----FPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 157
            K +E G +  FK R+VA G  QI GI F  +SS  P+A SIK ++++A  +  +L H D +QAY+   + +EI++       ++P+      G+  ++++A+YGL Q GR W  +    L   G+EQ   D CVF K+VDGEVV +I+IYVDD+L+
Sbjct:  554 KTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYL-------RFPEGCGSMSGKVVKVERALYGLKQGGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV 702          
BLAST of mRNA_H-paniculata_contig26207.7162.1 vs. uniprot
Match: A0A6H5KF18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF18_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 2.850e-28
Identity = 61/156 (39.10%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    6 KISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPD----FPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 157
            K +E G +  FK R+VA G  QI GI F  +SS  P+A SIK ++++A  +  +L H D +QAY+   + +EI++       ++P+      G+  ++++A+YGL Q+GR W  +    L   G+EQ   D CVF K+VDGEVV +I+IYVDD+++
Sbjct:  267 KTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYL-------RFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIIV 415          
BLAST of mRNA_H-paniculata_contig26207.7162.1 vs. uniprot
Match: A0A6H5JDR8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR8_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 3.500e-28
Identity = 62/156 (39.74%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    6 KISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPD----FPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 157
            K +E G +  FK R+VA G  QI GI F  +SS  P+A SIK ++++A  +  +L H D +QAY+ V + +E        ++++P+      G+  ++++A+YGL Q+GR W  +    L   G+EQ   D CVF K+VDGEVV +I+IYVDD+L+
Sbjct:   54 KTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHVKLKEE--------NLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV 201          
BLAST of mRNA_H-paniculata_contig26207.7162.1 vs. uniprot
Match: A0A6H5K1I0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I0_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 4.340e-28
Identity = 61/156 (39.10%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    6 KISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPD----FPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 157
            K +E G +  FK R+VA G  QI GI F  +SS  P+A SIK ++++A  +  +L H D +QAY+   + +EI++       ++P+      G+  ++++A+YGL Q+GR W  +    L   G+EQ   D CVF K+VDGEVV +I++YVDD+L+
Sbjct:  413 KTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYL-------RFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVMYVDDILV 561          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26207.7162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY81_9PHAE9.330e-3139.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KFN5_9PHAE6.050e-2942.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A061F8M9_THECC9.730e-2936.90Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
UPI00084940231.170e-2836.31uncharacterized mitochondrial protein AtMg00810 n=... [more]
A0A6H5K3C5_9PHAE1.550e-2839.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRC6_9PHAE1.700e-2842.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JI74_9PHAE2.340e-2839.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KF18_9PHAE2.850e-2839.10Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JDR8_9PHAE3.500e-2839.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1I0_9PHAE4.340e-2839.10Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..160
e-value: 3.6E-32
score: 111.9
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 8..145
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 8..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26207contigH-paniculata_contig26207:60..560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26207.7162.1mRNA_H-paniculata_contig26207.7162.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26207 60..1844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26207.7162.1 ID=prot_H-paniculata_contig26207.7162.1|Name=mRNA_H-paniculata_contig26207.7162.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=167bp
MPYKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMIL
SLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEARRLD
KAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIII
YVDDLLINTKCTQSHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like