mRNA_H-paniculata_contig26185.7154.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26185.7154.1 vs. uniprot
Match: D7FXJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ2_ECTSI) HSP 1 Score: 177 bits (449), Expect = 3.610e-50 Identity = 87/139 (62.59%), Postives = 102/139 (73.38%), Query Frame = 3
Query: 150 AMLESTLLGWSERQSHILSGAGRSNDLYRKPLFPFSEEELPHYHKARGSSHEVFREWRRQGSGLGKTIAGAWRRPLFVGGWTHSDDAS----------PL--TGETTFNLQTPSVFLDMRVPKAAATRLGHHRGFETMT 530
A S+LL WS++Q HIL+G G S+ YR P FPFS+EELPH+HKAR ++HE F W QG+G G IAGAW+RPLFVGGWTHSDDA+ P+ GETTFNLQTPSVF+D+RVPKAAA LGHHR F TMT
Sbjct: 28 AAASSSLLKWSDKQFHILTGGGVSSKWYRGPRFPFSQEELPHFHKARATTHEAFSLWHNQGTGCGAEIAGAWKRPLFVGGWTHSDDAAEPASRSSSSPPIGQEGETTFNLQTPSVFIDIRVPKAAAALLGHHRSFHTMT 166
BLAST of mRNA_H-paniculata_contig26185.7154.1 vs. uniprot
Match: A0A7S0LXZ3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LXZ3_9CRYP) HSP 1 Score: 109 bits (273), Expect = 6.590e-28 Identity = 51/104 (49.04%), Postives = 68/104 (65.38%), Query Frame = 3
Query: 171 LGWSERQSHILSGAGRSNDLYRKPLFPFSEEELPHYHKARGSSHEVFREWRRQGSGLGKTIAGAWRRPLFVGGWTHSDDASPLTGETTFNLQTPSVFLDMRVPK 482
+ WS Q IL+G GR +LY+ PLFP+ +ELPHYHK G++ + F W+ G +AGAW R LFVGGW H+D + E FNLQTPS+F+DMR+P+
Sbjct: 4 MDWSSIQGSILTGGGRLEELYQPPLFPWRPDELPHYHKVNGTTQKQFDAWKAAGV-CSDLVAGAWSRELFVGGWHHTDSHT----ERVFNLQTPSLFIDMRIPR 102
BLAST of mRNA_H-paniculata_contig26185.7154.1 vs. uniprot
Match: A0A7S0E054_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E054_9CRYP) HSP 1 Score: 111 bits (278), Expect = 4.020e-26 Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 3
Query: 177 WSERQSHILSGAGRSNDLYRKPLFPFSEEELPHYHKARGSSHEVFREWRRQGSGLGKTIAGAWRRPLFVGGWTHSDDASPLTGETTFNLQTPSVFLDMRVP 479
WS Q ++SG GR LY P FP+ EEELPH+HK RGS+H F +W+++ + + GAW RPLF+GGW HSD T E+ +NLQTPS+F+D+R+P
Sbjct: 12 WSREQGAMVSGGGRIERLYDAPRFPWQEEELPHFHKVRGSTHADFGKWKKERR-THEIVVGAWFRPLFLGGWIHSD----ATTESVYNLQTPSLFIDLRIP 107
BLAST of mRNA_H-paniculata_contig26185.7154.1 vs. uniprot
Match: A0A835YWZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ2_9STRA) HSP 1 Score: 110 bits (276), Expect = 6.230e-26 Identity = 55/105 (52.38%), Postives = 68/105 (64.76%), Query Frame = 3
Query: 171 LGWSERQSHILSGAGRSNDLYRKPLFPFSEEELPHYHKARGSSHEVFREWRRQGS--GLGKTIAGAWRRPLFVGGWTHSDDASPLTGETTFNLQTPSVFLDMRVP 479
+ W+ RQ HIL+G GR LYR F EEELPHYH ++G S ++F +W+ + +AG W RPLFVGGW HSD + ET +NLQTPSVFLDMRVP
Sbjct: 1 MDWTRRQGHILTGDGRLEQLYRD----FDEEELPHYHLSKGRSWQIFEQWQASPATRSTSACVAGVWSRPLFVGGWEHSDASQ----ETVYNLQTPSVFLDMRVP 97
BLAST of mRNA_H-paniculata_contig26185.7154.1 vs. uniprot
Match: A0A7S1MU91_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MU91_HEMAN) HSP 1 Score: 105 bits (261), Expect = 8.940e-25 Identity = 51/121 (42.15%), Postives = 74/121 (61.16%), Query Frame = 3
Query: 168 LLGWSERQSHILSGAGRSNDLYRKPLFPFSEEELPHYHKARGSSHEVFREWRRQGSGLGKTIAGAWRRPLFVGGWTHSDDASPLTGETTFNLQTPSVFLDMRVPKAAATRLGHHRGFETMT 530
L+ WS Q IL+ G+ +++ P PF E ELPHYHK R ++ + F +WR +G ++G W RPLFVGG+ HSD ++ E FN+Q+PS+FLD+R+P H+G +TMT
Sbjct: 47 LIDWSATQGAILTYNGKLESVFKPPQHPFEEHELPHYHKVRRTTRQAFAKWRSEGRS-NALVSGCWSRPLFVGGFKHSDAST----ERVFNVQSPSIFLDLRLP--LHQDFSRHKGLDTMT 160
BLAST of mRNA_H-paniculata_contig26185.7154.1 vs. uniprot
Match: A0A7S2WRQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRQ3_9STRA) HSP 1 Score: 104 bits (260), Expect = 9.210e-24 Identity = 54/111 (48.65%), Postives = 70/111 (63.06%), Query Frame = 3
Query: 168 LLGWSERQSHILSGAGRSNDLYRKPL--FPFSEEELPHYHKARGSSHEVFREWRRQGSGLGKT----IAGAWRRPLFVGGWTHSDDASPLTGETTFNLQTPSVFLDMRVPK 482
LL WS +QS IL+G GR+ +LY PL + F+ EELPH+H +GS HE F EWRR + GAW R LF GGW HS +A E FN+QTPS+F+D+R+P+
Sbjct: 9 LLDWSAKQSRILTGGGRAEELYL-PLRGYSFAPEELPHHHLLQGSCHEAFAEWRRLAPATAEEPTSLAVGAWSRALFAGGWEHSTNAD----EAVFNIQTPSLFVDLRIPR 114
BLAST of mRNA_H-paniculata_contig26185.7154.1 vs. uniprot
Match: A0A7S2PN58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PN58_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.840e-23 Identity = 55/123 (44.72%), Postives = 72/123 (58.54%), Query Frame = 3
Query: 129 TTRSTSVAMLESTLLGWSERQSHILSGAGRSNDLYRKPL-FPFSEEELPHYHKARGSSHEVFREWRRQGSGL----GKT-IAGAWRRPLFVGGWTHSDDASPLTGETTFNLQTPSVFLDMRVP 479
TTR + + LLGW+ +Q IL+ G++ + Y FPF+ ELPHYH RG SH+VFR W S GK+ I GAW RPLF G W HS D ET +N+QT S+F+D+R+P
Sbjct: 59 TTRKNNTDDWQKALLGWTAKQGRILTDEGKATEHYCSERGFPFASNELPHYHLERGDSHQVFRRWAAAASSCDDQEGKSPIVGAWSRPLFTGKWEHSTD----NDETVYNIQTGSLFIDLRIP 177
BLAST of mRNA_H-paniculata_contig26185.7154.1 vs. uniprot
Match: L1JSR4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JSR4_GUITC) HSP 1 Score: 102 bits (253), Expect = 1.550e-22 Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = 3
Query: 177 WSERQSHILSGAGRSNDLYRKPLFPFSEEELPHYHKAR------GSSHEVFREWRRQGSGLGKTIAGAWRRPLFVGGWTHSDDASPLTGETTFNLQTPSVFLDMRVP 479
WS+ Q ++SG GR L+ P F + EE+LPH+HKAR GS+H F +W+R+ + GAW RPLF+GGW HSD + E+ +NLQTPS+F+D+R+P
Sbjct: 3 WSKEQGVMVSGGGRIERLFDAPRFSWKEEDLPHFHKARTCSWVKGSTHAAFGKWKRE-KRTHDIVVGAWFRPLFLGGWIHSDSRT----ESVYNLQTPSLFIDLRIP 104
BLAST of mRNA_H-paniculata_contig26185.7154.1 vs. uniprot
Match: A0A7S2V381_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V381_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 6.230e-22 Identity = 55/107 (51.40%), Postives = 64/107 (59.81%), Query Frame = 3
Query: 168 LLGWSERQSHILSGAG---RSNDLYRKPLFPFSEEELPHYHKARGSSHEVFREWRRQGSGLGKTIAGAWRRPLFVGGWTHSDDASPLTGETTFNLQTPSVFLDMRVP 479
LL WS Q IL+GAG ++++L R FSE ELPHYH A GSSH VF+ W QG+ I G W RPLF GGW S D FNLQTPS+F+DMR P
Sbjct: 10 LLEWSRTQGEILTGAGELQKNSELGRD----FSESELPHYHLANGSSHHVFQAWLSQGN-RSSIIVGCWSRPLFSGGWKESTDEDT----NAFNLQTPSIFIDMRFP 107
BLAST of mRNA_H-paniculata_contig26185.7154.1 vs. uniprot
Match: A0A7S0IS63_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IS63_9EUKA) HSP 1 Score: 97.4 bits (241), Expect = 1.260e-20 Identity = 57/122 (46.72%), Postives = 72/122 (59.02%), Query Frame = 3
Query: 165 TLLGWSERQSHILSGAGR--SNDLYRKPL-FPFSEEELPHYHKARGSSHEVFREWRRQG-------SGLGKTIAGAWRRPLFVGGWTHSDDASPLTGETTFNLQTPSVFLDMRVPKAAATRL 500
+LL WS +Q+ +L+G G + LY FPF EEELPH+H S H VF RR SG + + GAW RPLFVGGW HSDD S + FN+QTPS+F+D+R+P A T L
Sbjct: 13 SLLDWSAKQARLLTGGGAHVAERLYSADNGFPFLEEELPHHHLLNASMHAVFA--RRSSLVASALESGAPEWMCGAWSRPLFVGGWEHSDDRS----DACFNVQTPSLFVDLRIPTARRTAL 128 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26185.7154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26185.7154.1 >prot_H-paniculata_contig26185.7154.1 ID=prot_H-paniculata_contig26185.7154.1|Name=mRNA_H-paniculata_contig26185.7154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp MGKPEDYKGGGGDADSKRECQDTVMDTTTTTSIAATTTSITTRSTSVAMLback to top mRNA from alignment at H-paniculata_contig26185:569..1911- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26185.7154.1 ID=mRNA_H-paniculata_contig26185.7154.1|Name=mRNA_H-paniculata_contig26185.7154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1343bp|location=Sequence derived from alignment at H-paniculata_contig26185:569..1911- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26185:569..1911- >mRNA_H-paniculata_contig26185.7154.1 ID=mRNA_H-paniculata_contig26185.7154.1|Name=mRNA_H-paniculata_contig26185.7154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at H-paniculata_contig26185:569..1911- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |