mRNA_H-paniculata_contig2614.7143.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2614.7143.1
Unique NamemRNA_H-paniculata_contig2614.7143.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2614.7143.1 vs. uniprot
Match: D7FMM9_ECTSI (Similar to ATP synthase mitochondrial F1 complex assembly factor 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM9_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 1.450e-128
Identity = 190/275 (69.09%), Postives = 224/275 (81.45%), Query Frame = 1
Query:  469 RGVSTTANLTHQRVKGRSRFYKEVTTRKVAREEGGGEARTGTRL------WEVLLDGRVLKTPARNLLQFDTAELALAVAAEWDAQNTTKGLEPALMPLMSLASTAIDQVAQDRERTIGTCLKYLPTDTVCFLAPDPDPVVSRRQRQLWAPLREWAGTELSIPVCTSMGVYERPKHPPEALRNARALLESCDDWALAALQSMTMECKSLVIALALAFRKINVDKAFDAARLEEEYNVERWGMVEGGHDMDRANTRLNLTAASTLLWLRNASLPKP 1275
            R +S+   LTHQR+KGRSRFYK VT R++  ++ G EA     +      WE+LLD RVLKTP R  LQFD+ ELA+AVAAEWDAQ+T+KG+EPA+MPLM+LASTA+DQVA DRE+T+ TCLKYLPTDTVCFL+PDPDPV++RRQRQLW+PLR+W    L IPV T+  ++  P+HPPEAL  AR LLES D+W LAA+QS TMECKSLVIALAL FRK  V+KAFDAARLEEEYNVERWGM+EGGHDMDRANT L LTAASTL+WLR+ASL  P
Sbjct:   74 REMSSAPELTHQRIKGRSRFYKTVTIREIVADKAGDEASAAAAVGDKSPRWEILLDSRVLKTPGRRPLQFDSPELAMAVAAEWDAQDTSKGIEPAVMPLMALASTALDQVASDREKTVATCLKYLPTDTVCFLSPDPDPVIARRQRQLWSPLRDWTEEALGIPVATTTEIHRTPQHPPEALARARDLLESLDEWGLAAVQSATMECKSLVIALALLFRKTTVEKAFDAARLEEEYNVERWGMIEGGHDMDRANTTLTLTAASTLIWLRSASLRPP 348          
BLAST of mRNA_H-paniculata_contig2614.7143.1 vs. uniprot
Match: A0A835YM22_9STRA (ATP synthase-like protein mitochondrial F1 complex assembly factor 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM22_9STRA)

HSP 1 Score: 273 bits (699), Expect = 6.340e-84
Identity = 146/288 (50.69%), Postives = 193/288 (67.01%), Query Frame = 1
Query:  406 SSALSRAAGG------AGRLPSDGERRRGVSTTANLTHQRVKGRSRFYKEVTTRKVAREEGGGEARTGTRLWEVLLDGRVLKTPARNLLQFDTAELALAVAAEWDAQNTTKGLEPALMPLMSLASTAIDQVAQDRERTIGTCLKYLPTDTVCFLAPDPDPVVSRRQRQLWAPLREWAGTELSIPVCTSMGVYERPKHPPEALRNARALLESCDDWALAALQSMTMECKSLVIALALAFRKINVDKAFDAARLEEEYNVERWGMVEGGHDMDRANTRLNLTAASTLLWL 1251
            SSAL RAA G      A  LP   +RR    +  +  HQ++KGR RFYK V+  +V   +  G        W+VLLD R L+TPAR  L F T  LA AVAAEWDAQ  + G+EPA+MPLM+L +TA+DQVA + E TI   + YL TDTVCF APD D ++ +RQ++ W PL  WA   L   +  +     RP+HPPE +  ARA++   D +AL+A+Q +TMECKSLV+ALA+A+R+I +++AFDAARLEE +N+E WG+VEGGHD+D  +T+L L+AAS LLWL
Sbjct:   18 SSALCRAACGPWQQQHAADLPLRCQRRN--MSVQDTVHQKIKGRRRFYKIVSVDQVKASDSSGPQ------WQVLLDNRPLRTPARRPLHFPTEALARAVAAEWDAQTRSTGIEPAVMPLMTLCATALDQVAVNPEPTIDNVMNYLHTDTVCFFAPDDDRIILKRQKKTWGPLHTWASKALGGELVKTQHAIARPQHPPEVVDQARAIVAGLDPFALSAVQCITMECKSLVVALAVAYRQITMEQAFDAARLEEGFNIEHWGLVEGGHDLDICSTKLQLSAASMLLWL 297          
BLAST of mRNA_H-paniculata_contig2614.7143.1 vs. uniprot
Match: A0A7S3HNX9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNX9_9STRA)

HSP 1 Score: 219 bits (557), Expect = 3.440e-63
Identity = 111/250 (44.40%), Postives = 159/250 (63.60%), Query Frame = 1
Query:  499 HQRVKGRSRFYKEVTTRKVAREEGGGEARTGTRLWEVLLDGRVLKTPARNLLQFDTAELALAVAAEWDAQ-NTTKGLEPALMPLMSLASTAIDQVAQDRERTIGTCLKYLPTDTVCFLAPDPDPVVSRRQRQLWAPLREWAGTELSIPVCTSMGVYERPKHPPEALRNARALLESCDDWALAALQSMTMECKSLVIALALAFRKINVDKAFDAARLEEEYNVERWGMVEGGHDMDRANTRLNLTAASTLL 1245
            HQ + GR+RFYK+V        + G         + + LDGRVLKTP RN L      LA+++AAEWDAQ N   G++P  MP+MS+ASTAIDQ+  DR   + TC++YLPTDT  F APD D ++  +Q++ + P+ EWA  EL + + TS  +  R +HP  A    R++LE  D + L  +Q  T+ECKS++++LA   R I+++KA  A+R+EEE+ VE WG+VEGGHDMDR N  + L++  T +
Sbjct:   29 HQSISGRTRFYKKVDVIPTPDGKAGQ--------YSITLDGRVLKTPGRNPLILPNLNLAMSIAAEWDAQTNKRMGIQPVNMPMMSIASTAIDQIQVDRTHAVDTCMRYLPTDTALFHAPDYDRILQAQQKKHFLPVLEWAQKELDMNLATSQSMAGRIEHPEAAYNKLRSILEKMDYYTLTCVQGATLECKSILLSLAFISRFIDLEKAIAASRIEEEFQVEIWGVVEGGHDMDRLNNAVRLSSVGTFM 270          
BLAST of mRNA_H-paniculata_contig2614.7143.1 vs. uniprot
Match: A0A6V1NN32_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NN32_HETAK)

HSP 1 Score: 215 bits (547), Expect = 1.000e-61
Identity = 110/256 (42.97%), Postives = 159/256 (62.11%), Query Frame = 1
Query:  490 NLTHQRVKGRSRFYKEVTTRKVAREEGGGEARTGTRLWEVLLDGRVLKTPARNLLQFDTAELALAVAAEWDAQNTTKGLEPALMPLMSLASTAIDQVAQDRERTIGTCLKYLPTDTVCFLAPDPDPVVSRRQRQLWAPLREWAGTELSIPVCTSMGVYERPKHPPEALRNARALLESCDDWALAALQSMTMECKSLVIALALAFRKINVDKAFDAARLEEEYNVERWGMVEGGHDMDRANTRLNLTAASTLLWLRN 1257
            N  HQ +KGR RFY  V+ ++V   E G         +E+ LDGR LKTP RN + F   + ALAVAAEWD+Q   KG+EP  MPLM+L +TAID ++ D   T+   LKY PTDT C+ A + + ++ +RQ +L  P+ E       + + T+  +  +  HPPE++   + ++ES D +AL+ALQ  TMECKSLV+ L+L    I V++A    R+EEE+ +E WG +E GHD+DR  T + L+AAS L+ L++
Sbjct:   42 NKVHQTIKGRKRFYNNVSVKRV---ESGK--------FEIQLDGRSLKTPGRNSMHFPNEQYALAVAAEWDSQTEKKGIEPGTMPLMTLTATAIDHISVDPSPTLDNILKYFPTDTACYFANEEERILRKRQIKLLDPVIEKLSKTFGVDIATTDAMITKVPHPPESISKMKDIVESLDPFALSALQCATMECKSLVLGLSLTSGLITVEEAQACCRIEEEFQIEVWGEIENGHDLDRVGTAVQLSAASVLMQLKD 286          
BLAST of mRNA_H-paniculata_contig2614.7143.1 vs. uniprot
Match: A0A7S1XL47_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XL47_9STRA)

HSP 1 Score: 211 bits (538), Expect = 2.150e-60
Identity = 114/261 (43.68%), Postives = 159/261 (60.92%), Query Frame = 1
Query:  484 TANLTHQRVKGRSRFYKEVTTRKVAREEGGGEARTGTRL---WEVLLDGRVLKTPARNLLQFDTAELALAVAAEWDAQNTTKGLEPALMPLMSLASTAIDQVAQDRERTIGTCLKYLPTDTVCFLAPDPDPVVSRRQRQLWAPLREWAGTELSIPVCTSMGVYERPKHPPEALRNARALLESCDDWALAALQSMTMECKSLVIALALAFRKINVDKAFDAARLEEEYNVERWGMVEGGHDMDRANTRLNLTAASTLLWLRN 1257
            +A  THQ +KGR+RFY        A++E              W+V LDGR L TPAR  L   +  LA A+AAEWD Q+T  G+EP+ MPLMSLASTA+DQ+A D E TI   L +L TDT CFLAP  + ++  RQ +++APL  W        +  S  +  +P HP +A+    A +   D + LAALQ  T  CKS+V+ LA+   ++  ++A  A RLEE++NVE+WG+VEGGHD+D A +  +L++A+T L LR+
Sbjct:   24 SAPQTHQTIKGRTRFYVRTGVMP-AKDEAAAAVXXXXXXXGGWQVTLDGRPLPTPARAPLVLPSEPLAWAIAAEWDNQSTPVGIEPSFMPLMSLASTALDQIAVDAEPTINALLPFLKTDTACFLAPPEERILRARQEEVFAPLLAWVRERYGADLAVSEDIIAKPDHPADAVAALEAAMRGMDCFELAALQCATFNCKSMVMGLAVVEHELTPEEAQRACRLEEDFNVEQWGLVEGGHDVDMAASLASLSSATTFLRLRD 283          
BLAST of mRNA_H-paniculata_contig2614.7143.1 vs. uniprot
Match: A0A7S2WTT0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTT0_9STRA)

HSP 1 Score: 206 bits (523), Expect = 4.490e-58
Identity = 117/254 (46.06%), Postives = 162/254 (63.78%), Query Frame = 1
Query:  499 HQRVKGRSRFYKEVTTRKVAREEGGGEARTGTRLWEVLLDGRVLKTPARNLLQFDTAELALAVAAEWDAQNTTKGLEPALMPLMSLASTAIDQVAQDRERTIGTCLKYLPTDTVCFL---APDPDPVVSRRQRQLWAPLREWAGTELSIPVCTSMGVYERPKHPPEALRNARALLESCDDWALAALQSMTMECKSLVIALALAFRKINVDKAFDAARLEEEYNVERWGMVEGGHDMDRANTRLNLTAASTLLWL 1251
            H  +KGR RFYK+V  + +   +G G  +     +EV LDGR L+TP R  + FD+ ELA+AVA EWDAQ   +G+EPA MPLMSL ST +DQ +QDR   I   LK+LPTDT CF    AP    +V RRQ + +  L +W   +  + + T+ G+  + KH  EA+R   A+L++ DD AL A+Q  TME KS+V+ALAL  R++    A + ARLEEE+ +E+WG+VEGGHD+DRA +++   + S  L L
Sbjct:   34 HPTIKGRRRFYKQVAVQAL---DGSGATK-----YEVQLDGRSLRTPGRRAMHFDSQELAMAVALEWDAQ-APEGIEPATMPLMSLMSTWLDQTSQDRPTVITGALKFLPTDTCCFFNEEAPATRNLV-RRQEKHFFKLLDWLADDWGVELSTTNGIT-KVKHEDEAVRRVEAMLDALDDAALTAVQCATMEGKSVVLALALVLRRVTPKAAEEIARLEEEFQMEQWGLVEGGHDLDRAASKVQFASTSAFLRL 276          
BLAST of mRNA_H-paniculata_contig2614.7143.1 vs. uniprot
Match: A0A024TVQ1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TVQ1_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.750e-55
Identity = 115/269 (42.75%), Postives = 158/269 (58.74%), Query Frame = 1
Query:  466 RRGVSTTANLTHQRVKGRSRFYKEVTTRKVAREEGGGEARTGTRLWEVLLDGRVLKTPARNLLQFDTAELALAVAAEWDAQNTTKGLEPALMPLMSLASTAIDQVAQDRERTIGTCLKYLPTDTVCF-LAPDPDPVVSRRQRQLWAPLREWAGTELSIPVCTSMGVYERPKHPPEALRNARALLESCDDWALAALQSMTMECKSLVIALALAFRKINVDKAFDAARLEEEYNVERWGMVEGGHDMDRANTRLNLTAASTLLWLRNASLP 1269
            R GVS+ +     ++ GRSRFYK V        EG G          + LDG+ ++TP+R+LLQ  T  LA AVA EWDAQ+ T  ++P  MP+M+LASTA+D    D +  I   +KYL TDT+CF +       ++ RQ + W PLR+W  TE    +  + G   + +H P A+ N RA + S D + L A + +  ECKS+V+ALAL  R I   +A +  RLEEEY +ERWG+VEGGHD+DR N  +N+ +AS  LWL N   P
Sbjct:   28 RGGVSSGSGA---KIAGRSRFYKAVGIE----AEGDGYC--------ITLDGKKVRTPSRSLLQLPTKSLAAAVAKEWDAQHET--IQPTTMPIMTLASTALDH--WDFDFIIEEIMKYLQTDTICFPVESQHQEKLAARQEKKWQPLRKWFETEFGGELDINYGTINKLEHSPVAVENVRAFVYSMDKFELMAFRLIVRECKSMVVALALLKRHITAKEAIELGRLEEEYQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLNERTP 277          
BLAST of mRNA_H-paniculata_contig2614.7143.1 vs. uniprot
Match: A0A485KYK3_9STRA (Aste57867_13634 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYK3_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.830e-52
Identity = 109/252 (43.25%), Postives = 149/252 (59.13%), Query Frame = 1
Query:  505 RVKGRSRFYKEVTTRKVAREEGGGEARTGTRLWEVLLDGRVLKTPARNLLQFDTAELALAVAAEWDAQNTTKGLEPALMPLMSLASTAIDQVAQDRERTIGTCLKYLPTDTVCF-LAPDPDPVVSRRQRQLWAPLREWAGTELSIPVCTSMGVYERPKHPPEALRNARALLESCDDWALAALQSMTMECKSLVIALALAFRKINVDKAFDAARLEEEYNVERWGMVEGGHDMDRANTRLNLTAASTLLWLRN 1257
            ++ GRSRFYK V        EG G          V LDG+ ++TP+R+LLQ  T  LA  VA EWDAQ  T  ++P  MP+M+LAST++D    D E  +   +KYL TDT+CF +       ++ RQ + WAPLR+W   E    +  + G   R +H   A+   RALL+S D + L A + +  ECKS+V+ALAL  R I   +A +  RLEEE+ +ERWG+VEGGHD+DR N  +N+ +AS  LWL N
Sbjct:   43 KIAGRSRFYKVVGIE----PEGDGYC--------VTLDGKKVRTPSRSLLQLPTKALASVVAMEWDAQRET--IQPTTMPMMTLASTSLDH--WDTEFIMEELMKYLQTDTICFPVESQHQEKLASRQEKKWAPLRKWFEKEFGGELDVNHGTISRLEHDVAAVNRVRALLDSLDPFELMAFRLIVRECKSMVVALALMKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLN 278          
BLAST of mRNA_H-paniculata_contig2614.7143.1 vs. uniprot
Match: A0A482S1E3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1E3_9ARCH)

HSP 1 Score: 188 bits (478), Expect = 1.670e-51
Identity = 110/250 (44.00%), Postives = 144/250 (57.60%), Query Frame = 1
Query:  493 LTHQRVKGRSRFYKEVTTRKVAREEGGGEARTGTRLWEVLLDGRVLKTPARNLLQFDTAELALAVAAEWDAQ-NTTKGLEPALMPLMSLASTAIDQVAQDRERTIGTCLKYLPTDTVCFLAPDPDPVVSRRQRQLWAPLREWAGTELSIPVCTSMGVYERPKHPPEALRNARALLESCDDWALAALQSMTMECKSLVIALALAFRKINVDKAFDAARLEEEYNVERWGMVEGGHDMDRANTRLNLTAAST 1239
            LTHQ   GR RFYK V  +K+A  + G E           LDGR L+TPARN L   T  LALA+AAEWDAQ +  KG+EP  MPLM+LASTAIDQ+A   E TI T L Y+PTD+  +   + D  +  +Q+    P+       L I V T+  + ++  HP          L   D + LAA+QS   E KSLV++L+L  +  ++ +   A+RLEEE   E WG+VEGGHDMDR N  + L+AA T
Sbjct:   48 LTHQGFAGRKRFYKHVGVKKIAENKFGIE-----------LDGRTLRTPARNNLHLPTFSLALAIAAEWDAQTDQRKGIEPVTMPLMTLASTAIDQIAPHPEGTIETVLSYMPTDSALYFTTEQDRYLYNKQQTHLLPILSKFNDALQIRVATTQDMSQKISHPVGVQEKIAFFLSKLDCFTLAAVQSAVKESKSLVLSLSLVGKLASLQEVVLASRLEEEVQCEIWGVVEGGHDMDRLNNSVGLSAAHT 286          
BLAST of mRNA_H-paniculata_contig2614.7143.1 vs. uniprot
Match: A0A067CEM7_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEM7_SAPPC)

HSP 1 Score: 185 bits (469), Expect = 1.370e-50
Identity = 102/250 (40.80%), Postives = 149/250 (59.60%), Query Frame = 1
Query:  505 RVKGRSRFYKEVTTRKVAREEGGGEARTGTRLWEVLLDGRVLKTPARNLLQFDTAELALAVAAEWDAQNTTKGLEPALMPLMSLASTAIDQVAQDRERTIGTCLKYLPTDTVCF-LAPDPDPVVSRRQRQLWAPLREWAGTELSIPVCTSMGVYERPKHPPEALRNARALLESCDDWALAALQSMTMECKSLVIALALAFRKINVDKAFDAARLEEEYNVERWGMVEGGHDMDRANTRLNLTAASTLLWL 1251
            ++ GRSRFYKEV  +     +GGG          V LDG+ ++TPAR+LLQ  T  LA AVA EWDAQ   + ++P+ MP+MSLA+T++D    + +  +   +KYL TDT+CF +       ++ RQ + W  LR+W   E    +  + G     +H P A+ N RA L+  D++ + A + +  E KS+ +ALAL  R I   +A +  RLEEE+ +ERWG+VEGGHD+DR N  +N+ +AS  LWL
Sbjct:   28 KIAGRSRFYKEVGVQAQDEADGGGFC--------VTLDGKKVRTPARSLLQLPTKSLAAAVAMEWDAQK--ESIQPSTMPMMSLAATSLD--FWELDIIVDELMKYLQTDTICFPVEKTHQEKLATRQEKKWGTLRKWFEEEFDGELDVNHGTITVLQHNPTAVANVRAYLQQMDNFEIMAFRCIVRELKSMTVALALTKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLDRVNCSVNVHSASFFLWL 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2614.7143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMM9_ECTSI1.450e-12869.09Similar to ATP synthase mitochondrial F1 complex a... [more]
A0A835YM22_9STRA6.340e-8450.69ATP synthase-like protein mitochondrial F1 complex... [more]
A0A7S3HNX9_9STRA3.440e-6344.40Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6V1NN32_HETAK1.000e-6142.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XL47_9STRA2.150e-6043.68Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2WTT0_9STRA4.490e-5846.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A024TVQ1_9STRA3.750e-5542.75Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A485KYK3_9STRA1.830e-5243.25Aste57867_13634 protein n=1 Tax=Aphanomyces stella... [more]
A0A482S1E3_9ARCH1.670e-5144.00Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A067CEM7_SAPPC1.370e-5040.80Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2614contigH-paniculata_contig2614:5332..19056 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.0
Seed ortholog evalue5.7e-106
Seed eggNOG ortholog2880.D7FMM9
KEGG koko:K07556
Hectar predicted targeting categorymitochondrion
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0008150,GO:0009987,GO:0016043,GO:0016604,GO:0016607,GO:0022607,GO:0031974,GO:0031981,GO:0034622,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043461,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0065003,GO:0070013,GO:0070071,GO:0071840
EggNOG free text desc.proton-transporting ATP synthase complex assembly
EggNOG OGsCOG5387@1,KOG3015@2759
Ec32 ortholog descriptionsimilar to ATP synthase mitochondrial F1 complex assembly factor 2
Ec32 orthologEc-23_000930.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029
Exons7
Model size1771
Cds size1002
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929781.2946296-UTR-H-paniculata_contig2614:5331..56161622929781.2946296-UTR-H-paniculata_contig2614:5331..5616Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2614 5332..5616 +
1691481007.8910422-UTR-H-paniculata_contig2614:5331..56161691481007.8910422-UTR-H-paniculata_contig2614:5331..5616Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2614 5332..5616 +
1622929781.4449134-UTR-H-paniculata_contig2614:18572..190561622929781.4449134-UTR-H-paniculata_contig2614:18572..19056Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2614 18573..19056 +
1691481007.9813251-UTR-H-paniculata_contig2614:18572..190561691481007.9813251-UTR-H-paniculata_contig2614:18572..19056Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2614 18573..19056 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929781.326442-CDS-H-paniculata_contig2614:5616..57871622929781.326442-CDS-H-paniculata_contig2614:5616..5787Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 5617..5787 +
1691481007.904713-CDS-H-paniculata_contig2614:5616..57871691481007.904713-CDS-H-paniculata_contig2614:5616..5787Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 5617..5787 +
1622929781.3445492-CDS-H-paniculata_contig2614:9795..99961622929781.3445492-CDS-H-paniculata_contig2614:9795..9996Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 9796..9996 +
1691481007.919088-CDS-H-paniculata_contig2614:9795..99961691481007.919088-CDS-H-paniculata_contig2614:9795..9996Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 9796..9996 +
1622929781.3590527-CDS-H-paniculata_contig2614:11649..117691622929781.3590527-CDS-H-paniculata_contig2614:11649..11769Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 11650..11769 +
1691481007.9273782-CDS-H-paniculata_contig2614:11649..117691691481007.9273782-CDS-H-paniculata_contig2614:11649..11769Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 11650..11769 +
1622929781.3766026-CDS-H-paniculata_contig2614:13099..131641622929781.3766026-CDS-H-paniculata_contig2614:13099..13164Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 13100..13164 +
1691481007.9347672-CDS-H-paniculata_contig2614:13099..131641691481007.9347672-CDS-H-paniculata_contig2614:13099..13164Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 13100..13164 +
1622929781.3958683-CDS-H-paniculata_contig2614:14952..150341622929781.3958683-CDS-H-paniculata_contig2614:14952..15034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 14953..15034 +
1691481007.9427767-CDS-H-paniculata_contig2614:14952..150341691481007.9427767-CDS-H-paniculata_contig2614:14952..15034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 14953..15034 +
1622929781.4162774-CDS-H-paniculata_contig2614:15487..156851622929781.4162774-CDS-H-paniculata_contig2614:15487..15685Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 15488..15685 +
1691481007.9509711-CDS-H-paniculata_contig2614:15487..156851691481007.9509711-CDS-H-paniculata_contig2614:15487..15685Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 15488..15685 +
1622929781.4302042-CDS-H-paniculata_contig2614:18407..185721622929781.4302042-CDS-H-paniculata_contig2614:18407..18572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 18408..18572 +
1691481007.9689708-CDS-H-paniculata_contig2614:18407..185721691481007.9689708-CDS-H-paniculata_contig2614:18407..18572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2614 18408..18572 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2614.7143.1prot_H-paniculata_contig2614.7143.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2614 5617..18572 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2614.7143.1

>prot_H-paniculata_contig2614.7143.1 ID=prot_H-paniculata_contig2614.7143.1|Name=mRNA_H-paniculata_contig2614.7143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=334bp
MSSFLLPLSSRIRTLQHIRAAVLLARMHHPFMPSNTASLGSSALSRAAGG
AGRLPSDGERRRGVSTTANLTHQRVKGRSRFYKEVTTRKVAREEGGGEAR
TGTRLWEVLLDGRVLKTPARNLLQFDTAELALAVAAEWDAQNTTKGLEPA
LMPLMSLASTAIDQVAQDRERTIGTCLKYLPTDTVCFLAPDPDPVVSRRQ
RQLWAPLREWAGTELSIPVCTSMGVYERPKHPPEALRNARALLESCDDWA
LAALQSMTMECKSLVIALALAFRKINVDKAFDAARLEEEYNVERWGMVEG
GHDMDRANTRLNLTAASTLLWLRNASLPKPMGS*
back to top

mRNA from alignment at H-paniculata_contig2614:5332..19056+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2614.7143.1 ID=mRNA_H-paniculata_contig2614.7143.1|Name=mRNA_H-paniculata_contig2614.7143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13725bp|location=Sequence derived from alignment at H-paniculata_contig2614:5332..19056+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACGAGTCGTTTGTGAACTGGGGTAGATGCAATCGAGCCCACCTCGTTGC AGACGGTAGCTATCGAAATCAAATACTGTTTTGTACCAGTGACTGTGCAT TTCCGTCCTTCAACGCGGTCATTAACTACTCCGCGCACATTTTCGACAGT GTGTTAAAAAAAAAAATGGCCCGGCTGAAGGTTGACCGGAAATAGGAATC GAGAACAACACTTATACGACCGGCTGTTTGAGAGGGAGAAGGCAGTAAGA AAGCACCAGTGCAGAGGACCGACTTCTGGACTGGCATGTCTTCATTCCTG TTGCCCCTTTCTTCAAGGATCAGGACGCTCCAGCATATCCGTGCTGCGGT GCTTCTAGCACGAATGCATCATCCGTTCATGCCGTCGAACACAGCAAGCT TAGGTTCTTCTGCTCTGTCTAGAGCTGCTGGAGGGGCAGGCAGGCTACCA TCAGATGTAAGATTGCCAAGAGGGATGATACTGGGTGATGTGCGTTTGGT GCTGTACACTGCTGTGCTATCGCTACTTGTACTGTATGTACTGTGCTTTA CTGTATTGTACACACCGTTTCAATGACGGTTGACATCCCAAAGGGCTATC TACCACGCACATGCAATGTATCCTATCGCATTGCAGACTGCCACTGTATG TTGGACCATATGCTATACAAACACTCCTGTGGTACACACCCTGCAGCATA TTGCAGACACAAAAGTCGCGAGTCGTATCAGCATCCACCTGGTTCGGAGC ATCTTATCAAGGTCGTGTCTGAAAGAGGTTGTCTTCGCTCTAGTATGTCC AAGCCCTCTTAATTAGTAGGACACCCCAACCTTGCTGCTCGAATCTCTGC TGTGCCGTTCTCCTCGAACTCGAGCGCACATATTGTACCAACCATGCAAA ATTCTACGAGCATCCTGTTATTATTTAGAGTGGATACAGGCCGCGTTTAG GCCAGAAATCCCCAAAAGTGTCTTCCAATGATTCCTGGACGAGGATGCGC TGTATGGCCAAGTCGAAAGTATCTTACAATTCGGGGGTAAGAGACGTCGA GATTTCTTCAGTCCGGTAGCCAAATGTAGACCAGTTACTATTAGGGCCTG CATATTCTGATATGGGGGGATTTTCTCGTTGAAGTTAAATTCAATACAAA TTCCCCGAAATTGCACCAATTCGGCTCAAATTATGCGTGTTCCTAAAAGC GTCCGAAGAACGCCGGTGTTCGATTTGTGGCAAACTCGGCTTTGTTTGAA AAAGTTATGGCGAAAACTAGAAACTCTTGGAATACGACTAATACGCGAGT ATTTGGGGCAGTATCGGAGCACTTTTTTGTGTGTGTTCCATTTACTCCCC TTTCCTTTTCCCTGAGCATTGTTTCGAGTTTTCAAATGAAGGTTCACACA CATGGTCTTTCTTTAACTCTCGAGATTATCAGTGCTTGACATTTTTTTGT GTTATTTTCACCGCTTTCCCGGGGTATCGAGATAATTTCATATTCTGGGA CCCTGGAAAACCGGTAAAAAAAGCGAGACTGAAACGTATCGAGAGCTGAC GACCTCCGGAATTGAGCAAGGAATCGTTGTTGATAAAAAACCCGTAAAAG TGCAGTAGAAAAAATTATATGAATCTTCGTCGGAAGTGTTATTCGATTCA GCCTGTACTGTCACAAAAGTTGATCACTTATAGGCCACATGATCTTGCAC AATCGATGCTTATTTTACTTTTGGATATAAAATGCTTCGATAACGAGAAC TAGAACTAGAACTAGCCCTTTCATGTTTTTTAACGCCAACGTCGCCAGCG TACAGTCAATTATGTTGGTGCTCCGAGAAAGGAAAGCACACGCTTCTGAA GAGGCAGGTATCGTCAAAAATATTGTAGCTCACAACACCCCTCATCCAAC TATCCAATGTAATGCATTATATTTGTTGTCAGTATGCTGATCAGTGTTTG GAGCTTTGGCGGAAGCTGCACACACGTCAGCAACTCTTCCCCCACCCCTA GTTGTTTTAGTTTTGCCTATACCGTGTTCATGTACTTAACTGTAATTCCA GTTGGGCTGCAAAACTGCAGCATGAGGACAAAAACGATTTTCATTCAAGC TCAGTCCACTGAGGTAGGCAAAACAACTTTGTGGTTATTTTCTGGTACAG TTTTCAGGAGTTTTAGTTTGAAATTTCGAGATGAGCGAATCTTAAATGTG TATATATATAACCTTATTTTTTTCTGAAATATTTTCTTTATCAGGATTTT CCGAGATAGAGATACATCCATATTAAAAAAAAAAAAAAAAAAAGTTGGGG GCATCATTAATTACTACGTCTACTATATTTTTCGATGCGCGCTCATCTCG TCAAAAATTTACTTCGTGGGTGTTTTGGGGACAATTTGGTCTACTCATGT TGCAATAGCCGAAAATTCAGTAAGTACGGTGTTCTCAAATTCGAAAAGAA AAAAAGAAAGTAATATATATATATATATGTGTGTATTGTAAACGCATCGA TAACACTGATGCGCTCATCTCCAAGCGCGTTTATTATGGCTATCACAACC AACAATTAGAATTGACATTCGATGATATTCATGGCGAGAAGTAAAACATT CACCACGTTTTGGGGGCCCGTCAGGATTAAGATTTTAGGGGAATAACTTA TAATTTGCCTCTATCACGCCTCCCCCTTTCCCCAGTCAGCACTTCGGCCG AATTCTGATTGACAGGAGAGTCGGCCGAAAATGACAATTGTGAAAAATTA GAGCACACCAACTTTGGTACTAATGTACACACTGTAATACTGCAGGTGGT ACAGTAGAGCTTTATCACAGCACCATAAGCGAAAAAGCTAGGTCCATGGG CTAAGGAGGTAATGAAAGTGATACTGTCTGTACTTATACTTTCTCTTGAT CTAGTGTAGCTGTCTGAGGATCAAGGCGATATTGATGACTGTATACATTC AACGATGAACCAGCTTGTGGGTGATTGACGTGATTTTTTCCGCAGGCACC ACTGCACATGCGTCCATGTTAGATTTTTGCTCTTATCATGAGAGACTGGA GCAGAGTGCTTTGCATCGCGTTTATGCAGGACCTGCTACCTGTTTCCTGT CCATGGGCGGCACCCCACCCCCCTCTATGGTGAAAACAAACCACGCTTCA AACGGGTACGGCAAGTTGTGGCGTCGTATCCGTCGGCTCCTCTGTTCCTC GTTTCGATCACGATCGTCATAAGGTGCCCAGTCACTATTTGATCCATCGT AATTCCGACGGTGAAGAAAATTGTTTTCAATTGCCATAATGAAAAGGCTG AAAATTGTGTGAAAACTTGAAAAATTGGGACGAAAATGGCCCGCCGAAGG TACAATCAGTAAGGACGCCCAAATCCCCATTCATTTTTGTACATGTTTTA CATGTTATTTGTTTTGGTTGCTTGCGTTGGATTCCTTGGTGTTTTTGAGG TGTAGGATGACCGTGTGGAGCATGCTTTTCAACGGCCATCATGTCCACAG ACAGCTTGAGATGGATCTTTCGGTTGAAAAACGCACAAGATACGGCGAAA ATGCACGTAACAGCAAAGCATTGCCAAAACAGTTGCTCTTTGCCTTAGGA TAAGTCCTCGACCATGCCTCCAGACAAGCGTTGGGATAGTTCATATAAAC ACACGAATTCTCAGCCTTCGACGAAGCCCATCCGCAATCAATGGGTCTTT GTAGATCCTGAGCTTCAGCGCGCAACTCAACCCCGAATTTTGTTCCATTT CAAGAGGATAACATGCAGCAAATCGCCCCGATTTTGATGCTATTGTTTGA GTCGAATACACATGAAAGCTATTACTGCAAGATCTCATGTGAACGTGCAG GCTCCCAGCTTTTGATCGATGCCCCTCACGACTCGTGAACCGCGGTAATC TCCGAGACACAGTACGCTGAAGTTGGACAAAAATGGCAATTACTGACAGT AGTAACAAAGGGTTTTGTGAGAAAACGATCGAACTACAGTCAAAGGGCCG AACTTGAGAACTTTTAAGCCTATGTGATTTCCCAACTACACATTTGACCA TCATCCGGCATAGGTCATGTGCATGCTGAGAGTCCCAGCTTTTAGCTAAT CTCGTCATCATCAAATATATACCCAAATTGCGTTCGCCATACTCGCCAAA AGAACGTCCCACGGACTTATCGGACAGAGGGAGTACATCACTAGTACTGT ATACTGTATTAGAGTAAGATGATGGCTACGCCCATGGTTTATGCTTATCC TCCACCCAGTGTCTCGTCGCGCTCCCGTAGGCTTGCGGCGCTCGCGTCAT GAGTCGTTTTCCTGAAGCTGCTTTGAGTGTAGACTTGAAAAGCTGTTCCG AGACGACGACGAGGACAACGACGGCCACCTTATTACTGTATTAAATGATA ACGATAGACACACAACACGCAACCTGTGACGAAACCGAGTGAAACCAAAC CAAACAACGAACAGGGGGAACGACGTCGCGGCGTATCTACGACGGCCAAT TTAACCCACCAAAGGGTGAAAGGCCGAAGCCGTTTCTACAAGGAAGTCAC CACCCGAAAGGTCGCTCGAGAAGAAGGGGGCGGCGAGGCTCGAACAGGCA CGAGACTCTGGGAGGTGTTGCTGGATGGCCGCGTCCTCAAGACGCCCGCT CGCAACCTGCTGCAGGTAATGTAGAAGTTTGCGAATTTTCGGTAAAGAAC GTGACAAAAACTTAACCATAAAGAAAAGGTGGAGATACGCTCAGAGCTTT TTCAACGCTGCTAGATTTTTTCATCGTCAAACCGAGCAAGTTAGGGGGGT GGGCTACTGCATCTGACCGGGAGCATATCTGAATCACTCGCGTGTCTAAA CGTAGACGTAGGAGAACGTAGACAGCAGTCAAGACTAAAAATAGGTGAAG CTCACCCGCGCCCGCATAAATATGGCAACCCCTATTGATATATTTTTGCT AAAACGTGTGTACATGACTGATTTTTTTAGGTGAACTGCATAAACTTGAC AGGTTTGCAATGAAGTTATTATATGAGCGTTAGAGCTTAGTTCTGGCAAG TGTGGCAAGTCAGTGGCTTGACTTAGGTATAAGAAACGTGGGCGTCATTC ATGCACACGATAACTACTTGATGTCTTGTTTACAGCACACAAGCGAGTCG TAGCCCATGTCATGTCTGGTCGACGAGGTGCGAGAACCCCTGATAATAGG TCATCATGGGTTCAAAATGTTGTCATGTGAGCAGGACCCTCTCCATCTAC CCGTTCGCCGCCAACACAAGTCAACCACTTTGGTAATATTTCATTTTGTG TCGTGTTTTGAAGTACATGTAGATACATACCATGCTGAAGAGTTGTAGCC GCTACTTGTTGTCCCATCTCTCTTCAAAGTGTTCCCTCAATAACAATCAC ACGATGTCGCAAGTACACAAAAGATAATATTTCGCCTGCAGTTTAACATG GTTATTAATGAGCTTCCGTGTAATCACGCCGCACCAGATAAACGCATGGG GATGCAGCCAATCCCGTAATCTATACAGTTTCTGTATTCATGTAACGTGC CACGCGGAGGCTGTGCAGCTTGTAATTGAAAGCTATGGCTCATGACTACT CAATGTACATGTAACAACACCATTGAAAAATGACAGGGACGGTGACCGAA TAGTATCTACATAGAGTTTCTCCGTGTGGGTGTGCCATGTGCCATGTTCC ATTTAACCCATTTATTTTCTTATATTCTACCTGTTGATGCCAGTGAACTG AGTTCCCCGCCCGATACATTTATCGGTTTACTTATGGTAAAGGGTTCATA TTACCTCCCGGGGCGTATATTTTCTGCTTCCAAGAGGTGGACTATATGAT AGCCAAGTGGGGATTTGGAACCGCGGGTCTGAGAGGTCGAAATGATGTAC TGACGCAAACGGCTGTCACAGGGCGTTCCCTCTTCCAGCATGGAGTATGA CACAACAGTCAAACTTTCTTGTCCTACCGTTTTTCGTCTACTTGAGGAGA TTCACATAGGCGATCGATTGAGTAGTAACTAGCTAGCCCTGGCCTTGCTC GGCCGATTTTACCGTACCGAATGTATATATCACACGCCGCTCTCTTCGCT AGTGATCACATTATGGAACCGAACAGCGTAACGATATTTTCCATTTTTTT CTCCATTTGGCCCTCTGACACCCTCTTTCTTTTCTCTCTGTCTTTGTGCC TGTCTCTGTGTGTCTATCTATATGTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTC GCTCTTTCTCTCTCTTAGTTCGACACTGCGGAATTGGCTCTGGCTGTAGC TGCAGAGTGGGACGCGCAAAATACGACCAAGGGACTCGAGCCGGCACTAA TGCCGCTGATGTCGCTTGCCTCCACGGCCATTGACCAGGTGAAATGAGAT GAAGTAAAGCCATGCCTAATCGAACGACGGGAGAAACTGGAAAAATGACC TCTAAGAATATGGTACCATAGCGCGCCAGTCGTTCGGGAGGGTTCTGTAC TGTGTCGGCTATATGTATGTACATCATATATTGATATATACGAAGGATCA TGATATGGATCCTCCAAGTAAGTGCCGAGCTAAAATGTATGGGGTCTACA TATCCAACGTAAAAACCTCTCTCGAAGATGTCAACGATGTGACATGATAC CGTTTTCTATTTTTGGACCTTCCTTGTCGATCTCGGTTCATCAACTCTTT CTCGAGATGTCAACGATGTGACATGATACCGTTTTCTATTTTTGGACCTT CCTTGTCGATCTCGGTTCATCAACTCTTTCTCGAGATGTCAACGATGTGA CATGATACCGTTTTCTATTTTTGGACCTTCCTTGTCGATCTCGGTTCATC AACTCTTTCTCGAGATGTCAACGATGTGACATGATACCGTTTTCTATTTT TGGACCTTCCTTGTCGATCTCGGTTCATCCATTCTTTCTCGAGATGTCAA CGATGTGACATGATACCGTTTTCTATTTTTGGACCTTCCTTGTCGATCTC GGTTCATCCTCTCTTTCTCGAGCCTCCTTTTTCCTCCGGCTTGTGCTTTT TGAACAGGCCGTAAAATAGTGTCTAGCGAAGTTGCAAAAATCAAGTTGGC ATGGGAGGGAGACTCCAACACATCGAAAGAGGCGAACACCGATGCCTACA TAGAGATCCAGTTTACATACATGCATGCCCTTGGCTCCGAAGATAGCCGT TGCTCAGCTAGTTGCACAATTGATGCTTCGTAAAACCGAAATGTTTACCG TGTCGGGGGAGCTGAAGCAGTTCGCTTAAAATTGGGACACAACTACGTGC CCAGTTTGAACCGTGTTACACTTTGTGGAAGAGCATTGAAAATATTGCTT CTCCATTAATTTGGAATGGATTCAACCCAAGGCAATTGTATAAATGGGCA CGCTCTCCCACCTGCTCCTTTGTCTCTCTCTGTGTCTGTGTCTGTATTTG CCGCTCCGTCTCTCTCTCTCCGTGGGTTACCCTGAGGTTTTAACCGTGGG TCAATCAGTCAGTCATTATGATTATTTGACCCCGACAGAAAGATTCCGCC TCCCGCCACGTATTTTTTGTCGTGGACGAAAGGGTTGGTTTATGCCGCTC ACGTCGTGCAAAGCCCTGCAAAACAATACACACGAAGTGCGATGACGTGG TCTGCGATGTATCTGAGCCATTTGACGTATTTAAATGGTGAAAAATAACC GCAAGTATTCGGGCGCAGGTGGCACAGGACAGGGAGCGGACCATAGGAAC GTGCCTCAAGTATCTCCCCACGGATACTGTTTGGTGAGCGAGTCGAACCA AAATTGGCTCAAAGTGACAAGAAAGTGCGTACTTGGTATCGTTTCACGAG TAAAATACCGTAGCTTTCAGGGTTATATTATCTATCATCTCAGATAAGCC GTGACAGGTTGGTAGAGATCGTCGGCAGTTACGCACTACAAATTGTACAC GAGTTTTTCCCAACAGCTTCCCCGCCGATTTTTTCATTTTATTTTTTGGT ATCCAGTGAACCGGTTCACACATAACATGCCCTTTCTTTTTCTCCAGCAT TATGAGGTGCTGTATCGCCTATTGCATCTTGTGTCAAATCTTTGTGGCGG CACAAACGCTAAGACAAACGTACATGTAGTAACCGACTGCGTTGTGCGAT ACCATCAACAATACATGATTAATCACCCTGAGGCGTATGGTGCGGTCTTT CGGTAATCTCGTTCCTGTCTGTTGTCCGAGGCGACCCGGCCCAGTTCATC AGCTTCCTCGGCTTTTCGGTGCACCAGACCATCATTACCCGGTGTAAACC GTCGGTTGTTGCCGGCCAAGAGAGGGTAAAATGATAACATGTCTTCATGT CTGTACTTCTATGTTCCCAGTCGGCGACGACCTCTTTTTCCGTATTGTTA AAAGTCGATTTTTGCGAGAACCAAACAAAGCCTTGCACTGTACAGTTAAA ATAGTACTTCTATTTAATGACGGATATATCCACGAATCAGACATATCGCT CCTATAGCACCACACTTTGTTCGAGAAAATTCAATTTAACAAAGGCTGCT GCTGCTGGGGATAGATACCTTCTTTTTTTTGTCGGACGCATTAGCTCATG ATCTGTAGCATCGGACCCTGAAAAATAACAATAAGGAACCTGGCAGTCCC GCAGCGAAACCGTTGCGAAAAAGGGGGGGGGGAGTCCAGAATGAACATGA AGTGTGTGAGAAACACGCCCGACCCCATTTCCTTCGCGGAGGCGTTCTGG CTATATTCAAAATTTCATGCAAAGTACCTCTCTGGGCAGGGATTACACAG GGTCCGGTGCCATAGAAGTCAGTAGTGATGCATGCAACCTGTACGACGTG CATATGCTTGCCCCACGACTATATACGCGGGTGCTGTTGGGTATAATATC CTCGTACCTATTTCAGTTAAAAGTCATGACCAACAAACGAAGGCTTGCTG GGTTCACAATCAAAATGTGCCCAATGCGTCCATGAAGAGCCTACCTACCC ATAGAACGACTACGAGTCAGAGTCATTGTGGTCGAGTCCATTTGCTTAGT CGAGTCCATTTGCTTAGTCGTGTCCACTTTCGGGAATTCGTCGGCTTGGG GTCATTCTAAATGTAGCTATTTTTTTCTCTTTTTTTTCTCCTGATAGTAC CCTGGCTGAGATTACATTGGAAGAACCATAAAAAATTGAAATAGGGTTTA AAAAAATTGTGAGCAAAATATACAACTTTTTTTTCCCCTGAATTTTCGGA AAATTCGAGTCGGAAAAAAATAAATAAGCGGGAATATAGAGGGGAAACTG GGGAAAAGAGGAAAAACCGTACCGACATTTTGAACAGCGCTTAGTTGACA ATAGTCAGTTTCAACTATAATTGGTCCCGCTTTGCGAAATGATTCGCATT AGTTGACCAAGGACAGTCTAAATAGTCGTTGGATATATGGAACATTCAGT CTTCAATAATTTACTCCGACTACAAAGTTAACAACTGTTCCGAAACAATC GTAGAATATTGATCAATGCGGTTTTATTACCCTACTATACTCCGTTTGCC GCGCTGCCGTGCGTATTGCAGCTTTTTGGCTCCTGACCCTGATCCGGTGG TTAGCCGGAGGCAGCGTCAGCTGTGGGCCCCGCTACGAGAGTGGGCGGGA ACGGTGCGTGCGGGTCAACAGTGTATAATGACCATCGCATATCAATCAAG TGGCGCCCCCCCCCTATTTGTCATTATCTAATTTTGCCAATACGTGTAAG TGTAAGCAACTGAAATTTTAGGTCAGTCGCATAACCTTGACACGCGTACA TGCAGTGGAATTTCTACTGTGTGAGCGTTATGGATGTACTAACTGTTTGC TGTAGCGTGTCGTCAGCGAAAACCTATTCAGTACGATACAGTACGGCCAG TATTCGCTTACATTGAAGTCTGTCTTCAACTCTTTGAACAGGAGTAAAGG TTGTCGTTACTTCGTAGCCGAATGTCACGGAACAGGGTGTAATCGAGAAG CGGCACTCGAAATCATGCACCACTCCACCCGCCCTTGACCTTCATGAGTG AGGATTCGCCACCATTTCGTTTCCCGCTGAGCGCTGAATTACATTTCTGC CCCCAGGAATTGAGCATTCCCGTGTGCACATCTATGGGAGTGTACGAGCG ACCAAAGCACCCTCCAGAGGCTCTCCGTAACGCGCGGGCTTTGCTGGAAT CGTGCGATGATTGGGCGCTAGCGGCGCTGCAGAGCATGACTATGGAGTGC AAGTCCCTCGTCATCGCCCTGGCCCTTGCTTTCCGAAAGATCAACGTGGA TAAGGTGCGGAGAACCCGGAAAATTATCGCCACCCCTCCCCCCCCCAATT GTTTTATTTCATTTTAAAAAGGGTGAAAGACGAAGGGCCATAGAGTAAGA TACGTTAGTACAGAACTTGTGGAAAGAAACGAATTTTTCCAAAGGACTTT CCGAAGAGGAAACCCTGAAAATACAAGTAGGAGCATGGGCGGGTTTAAGA AGGAATAGCGGATGCAATTGTTGTCGAAGAAGATTAAGAATGGACGGGAA GAACAGCTGCGAGTAGGGAATGTCAGGAAATATTTCCGAAGATTGCATCA AAGGATAGGGTTCAAGGGAAGTCTACATCTACCATTAGACGCGGTTATAA AGTTGAAAGTGAGGTTTAGGACGGGGGATGCTGATCTCGAGGAATGCGGG GAGCGATTCTGGAAACTAGACGAGGACAATGATGTAAAGTTCAAGTACGA CTGCGGTAGTGCGTGCGAGGAACAAATTCACATGGTGGGAGAATGCTTCC CCCACGGAAAAGATAGAGAAATTTACAGGAGTAAATTGGAGATAATCGAA GGATGCGATACAGAGGCGCCTTAATCTTGGGAATAGACAAAAAGGCAACA GTGGTTCTAGGAGATGGAAGTTAGCCTTAAAAGGCGACGGTTGAGGTAGA AAAGTAATGTAAACGTTTTTTGAGTCACATGTGGCAACGTAAGAAAGGCG ATTGGCCATCAAAAATTGCTTTGATACGGATAAAGCACCATCCTCCCGAG GACGCGCGGTCGATGGTTTACCGACTACACTGTGCGTTGTGTAAAACATG AAAACAGGAGTACCCCCCTCCCCTAGGCACAATCCCGTTAGTCTCACTAA GGAAGCAAGGATTTAGCCCGCCCCAGGCACCAAAAATTGGGACTACGGCA TAATTTAATAAGTAATTGTTTTACGACTAAGTATGACTACGTTTGGCCTA GGCACGGCGAATACTTGAATTGGAATGATAACGCCTTCATGTTTTTGCGA GGGGGATGGGGAGACAATCCATTTAGTCACGCCACTCCAGGGAAAAGGGG TTTTGTCATGTATTTTGTTGTTGCTGGACATGTTTGGCTGGATCAACGGG TTGTGCCTAGAAGAAAGTTACAAATGTCCAAGAAACACATAGCCAAGTGG GTTGTCCCTTTCATTAACGTCTTTCCGAGTGTCGCCGTACCGCACCGTGC AACCTGCCACGGACGTAGCCCGTAGTCACGGGTTGCCACGTGCTTAGTCA CTTTTAAGCTGTGCCTACTTGTAGTTAATCGATTTATTCATTCTTTCTCC AGAAAACGGATTTAGCCGTTCATTTAGTCGTTACGAAGGAGGTTGTGCCT ATCGAGGATGCATAGTCAACGGCCCAATAGATTTTGTAACGCGTGCAAAA TAGGAGTACCAGTACCCCTCCCGTACCTGATAAATATGAATGTATAGCTG CCGCGAGTGCGGGTTAATACCGAAGATCGTGGCAAATCATGAGGCGGATT GACTTTTCCTGGGGTGTTTATTCCCCCCCCCTCTCCCTTGCACGGCGATT TCGGTTAATTACATTTGTGTGAAACGGCTGCTCTGTCCCCTATGGACTTC AGTGAGAACTATCCCATTCTATAGGGTACTACTCTCCACATTTGCTTGCA TTTTTATCGGAAGACATGAGTCTCAATAGATTCACTTCTTAAGATTGGCA AATTTAACCTTTTGTTGATCGGTTGATTAGTTGATTAGCTGGGTGGCTGA TTGGTGCAGTTTTTCCAATCTTGGTGCATGTACAACGGGGGCCTGGTTTG GCATACCAATCCCTCCCCACCGCCTCCAACCGTCCTTTTTTTGTGTATTT GCCACAGAAAAATGCCGCATCCTCGAAACAGGTTTCGAAGTCTCTTGTGT ATGCTTTTGGATTTGCCCATGTTAGTAGTTAGCTTTGCCGATGTTGTTGC GTTTTGACATCAATTGAAATTCATGAATACATGCCGTGGCGCAATAGTCA GTAATGAAAAACCATCAGAGTTGCTGAGCGGTTTCGTACTTGATATTAGC GATAGATACACCTGCTGGTGGCGCGTTTGCCATGTCGTCGAAATAGCATT TGACAACTTGTTCCATGTGATCAATGCTTCACGTTCGTGAGCTAATCTAA CGCTGAATTCTTTACCCCATCAGGCGCGAGCTAGCCTTCTGAAATTCGCT TTTTGATATTTTCTTCTTTTTTTTTAAAATATTTTTTTCATATAAATTAA CACAACGGTTTTATCAGACCTCGGGACGCAACCCATCGTAAACCTGCTTT TGGGGTCTCTTTTGAAACGCTCCAAAAACTGCTGCTTTTCATCACGAATC GGATGAAATCTACAACGATATTTCGAAAAGGCGGCGTCCCCAAGGGTTAA CCTAATGTAAACCCCAATCTTACTGACCCCGAGGGCGTGCAACCATGCAC GTCGGCAGAGCTCAAATCAGCGCCGTTGGCGGCCGTGAACTTGTGAGAAA ATCGTATTTTGGGGGGTAAACACACGTAGGCAACGGGTCCGTGTCTGAAG CTGTGGGAAATTTCTGCATACTCATAGGATACTGAGTTTGTGTGAATTTA TATGCACATATCAATCATATTAATCATATTAATCATATTAACCATTATTT TGGAAATAGGTGGTGGTATCCATAAAACACTCAAGCTGCTTGTTTGTCCT GCGATTACGTATGTTTCTCCCGACAGGCATTTGATGCGGCGCGGTTGGAG GAGGAGTATAACGTGGAGCGTTGGGGCATGGTAGAGGGGGGTCATGACAT GGATAGGGCCAATACGAGACTTAACCTCACGGCAGCTTCCACGCTGCTAT GGTTGAGAAACGCGTCTCTGCCAAAGCCTATGGGGTCGTGATCTTCATTA TTTGGATCCAACTTTCCACATTTTATTTCTATAGCGGGAGGTTCCCTGCC TTCGGGTTATAAGGTTTAGTGCGGGAATTTAGAAATCTGAGACGTCGTGG ATTATGTTTCTAATGTCTAATGTCGACGCTTGTCGAGAGGTACACGCTAC AAGTCACAAATGTGTGTTTTCGAGGTTTTGGAAGAAATGCGTTGTTCGTT GTTTTGGTCAACAAGCCAACCGTGCGGACTGTTGGAGAACGACGGGGTCA TCATCCATGTGGTATGGCTACTACTGTCTATTAGTCAGAAGACACCATTG CTTTCTTATCGACCCGCGTGGTTCATTGATTGATCGAAATCGGCTGCCGA GAAGATGGACATTGAGTTGCTGGACCCTTTAGAGTCGCGACATGGCATCA AGATTTCACAGCTCGGACGAAGGTTTGATTTTCAAGTAATTAACACGCAA CGGAACCGTCATCCCTTTATGCTCA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2614:5332..19056+

>mRNA_H-paniculata_contig2614.7143.1 ID=mRNA_H-paniculata_contig2614.7143.1|Name=mRNA_H-paniculata_contig2614.7143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2004bp|location=Sequence derived from alignment at H-paniculata_contig2614:5332..19056+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTTCATTCCTGTTGCCCCTTTCTTCAAGGATCAGGACGCTCCAGCA
TATCCGTGCTGCGGTGCTTCTAGCACGAATGCATCATCCGTTCATGCCGT
CGAACACAGCAAGCTTAGGTTCTTCTGCTCTGTCTAGAGCTGCTGGAGGG
GCAGGCAGGCTACCATCAGATATGTCTTCATTCCTGTTGCCCCTTTCTTC
AAGGATCAGGACGCTCCAGCATATCCGTGCTGCGGTGCTTCTAGCACGAA
TGCATCATCCGTTCATGCCGTCGAACACAGCAAGCTTAGGTTCTTCTGCT
CTGTCTAGAGCTGCTGGAGGGGCAGGCAGGCTACCATCAGATGGGGAACG
ACGTCGCGGCGTATCTACGACGGCCAATTTAACCCACCAAAGGGTGAAAG
GCCGAAGCCGTTTCTACAAGGAAGTCACCACCCGAAAGGTCGCTCGAGAA
GAAGGGGGCGGCGAGGCTCGAACAGGCACGAGACTCTGGGAGGTGTTGCT
GGATGGCCGCGTCCTCAAGACGCCCGCTCGCAACCTGCTGCAGGGGGAAC
GACGTCGCGGCGTATCTACGACGGCCAATTTAACCCACCAAAGGGTGAAA
GGCCGAAGCCGTTTCTACAAGGAAGTCACCACCCGAAAGGTCGCTCGAGA
AGAAGGGGGCGGCGAGGCTCGAACAGGCACGAGACTCTGGGAGGTGTTGC
TGGATGGCCGCGTCCTCAAGACGCCCGCTCGCAACCTGCTGCAGTTCGAC
ACTGCGGAATTGGCTCTGGCTGTAGCTGCAGAGTGGGACGCGCAAAATAC
GACCAAGGGACTCGAGCCGGCACTAATGCCGCTGATGTCGCTTGCCTCCA
CGGCCATTGACCAGTTCGACACTGCGGAATTGGCTCTGGCTGTAGCTGCA
GAGTGGGACGCGCAAAATACGACCAAGGGACTCGAGCCGGCACTAATGCC
GCTGATGTCGCTTGCCTCCACGGCCATTGACCAGGTGGCACAGGACAGGG
AGCGGACCATAGGAACGTGCCTCAAGTATCTCCCCACGGATACTGTTTGG
TGGCACAGGACAGGGAGCGGACCATAGGAACGTGCCTCAAGTATCTCCCC
ACGGATACTGTTTGCTTTTTGGCTCCTGACCCTGATCCGGTGGTTAGCCG
GAGGCAGCGTCAGCTGTGGGCCCCGCTACGAGAGTGGGCGGGAACGCTTT
TTGGCTCCTGACCCTGATCCGGTGGTTAGCCGGAGGCAGCGTCAGCTGTG
GGCCCCGCTACGAGAGTGGGCGGGAACGGAATTGAGCATTCCCGTGTGCA
CATCTATGGGAGTGTACGAGCGACCAAAGCACCCTCCAGAGGCTCTCCGT
AACGCGCGGGCTTTGCTGGAATCGTGCGATGATTGGGCGCTAGCGGCGCT
GCAGAGCATGACTATGGAGTGCAAGTCCCTCGTCATCGCCCTGGCCCTTG
CTTTCCGAAAGATCAACGTGGATAAGGAATTGAGCATTCCCGTGTGCACA
TCTATGGGAGTGTACGAGCGACCAAAGCACCCTCCAGAGGCTCTCCGTAA
CGCGCGGGCTTTGCTGGAATCGTGCGATGATTGGGCGCTAGCGGCGCTGC
AGAGCATGACTATGGAGTGCAAGTCCCTCGTCATCGCCCTGGCCCTTGCT
TTCCGAAAGATCAACGTGGATAAGGCATTTGATGCGGCGCGGTTGGAGGA
GGAGTATAACGTGGAGCGTTGGGGCATGGTAGAGGGGGGTCATGACATGG
ATAGGGCCAATACGAGACTTAACCTCACGGCAGCTTCCACGCTGCTATGG
TTGAGAAACGCGTCTCTGCCAAAGCCTATGGGGTCGTGAGCATTTGATGC
GGCGCGGTTGGAGGAGGAGTATAACGTGGAGCGTTGGGGCATGGTAGAGG
GGGGTCATGACATGGATAGGGCCAATACGAGACTTAACCTCACGGCAGCT
TCCACGCTGCTATGGTTGAGAAACGCGTCTCTGCCAAAGCCTATGGGGTC
GTGA
back to top