mRNA_H-paniculata_contig26110.7134.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig26110.7134.1
Unique NamemRNA_H-paniculata_contig26110.7134.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 273 bits (699), Expect = 1.550e-78
Identity = 171/436 (39.22%), Postives = 238/436 (54.59%), Query Frame = 1
Query:    1 DDSVARYKARLVAQGFAQVEGKDFF--ETSAPVARMSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSP------------------------------------FSRDIP----FVRRLRKSTNLLVAVYVGDLVIAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGV-----PTSAEGKVKISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLVT*SSTEIEYVAAGEAGKETVYLRELLGSIGFGCRGS--TKLFEDNKPAINLSKGSGAHCRTKHIGVRWHGIREWISGRNNGLEMR 1161
            + +V+ +KARLVAQGF+QV G+D+   ET APV+R+ ++RT+ SL A HD+EL  MDV +AYLN  LEE ++++LPP  +P                                    F+R +     F +R  +S  ++VA  V DL I G  + VD F  +I QRF M DLG L  +LGIEVRRDR + TI ISQ SYI  ++  +  DE   +     P S  G  +  +   +        Y+  V  LMY + GTRPDI +AV   ++ M++P R  +    R+ RYL    +L + +G  +   GL G+ DADW    E R S +GYV  L+GGAISW S+KQ +V  SSTE EY+A   A KE ++LR +L  I      +   +L  DN+ AI L+K +  H RTKHI +R+H IRE +  R+  LE R
Sbjct: 1085 EGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKREGESA-IIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYGTNN--EGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDILHPELATFPVRLHSDNRSAIALAKDNAFHSRTKHIDIRFHFIREAVDNRDIVLEHR 1517          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A2P4XRY4_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRY4_9STRA)

HSP 1 Score: 269 bits (687), Expect = 2.850e-78
Identity = 150/388 (38.66%), Postives = 226/388 (58.25%), Query Frame = 1
Query:    1 DDSVARYKARLVAQGFAQVEGKDFFETSAPVARMSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSPFSRDIPFVRRLRKSTNLLVAVYVGDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLVT*SSTEIEYVAAGEAGKETVYLRELLGSIGFGCRGSTKLFEDNKPAINLSKGSGAHCRTKHIGVRWHGIREWISGRNNGLEMR 1161
            +DS+ ++KARLVA+GF Q  G D+ ET APVAR  ++  V ++ AE D E E +DVD A+L   +EEEL++  P   +     I      + ST  +V VYV DL+I  R ++ + E K  +   F +K+LG L   LGIE+ R R    I ++Q +YI+ + +  G D+C+ + T A+   K+              Y+ +V  LMY++T TRPDIAYAV + A+  E   +  +    RI +YL T  D+G+ F     G  L G+ DA+WA D++ R+STTGYV   NG AISW S++Q  V  SSTE EY+A   A +E V+LR+LL  +G+  +G+T ++++N+  I L+K    H RTKHI +++H + E +  +   LE +
Sbjct:  555 NDSIVKFKARLVAKGFTQRPGIDYTETFAPVARKESINAVAAIAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFADQPTRIRSACWDKNSTYSIVIVYVDDLMIFSRTKDDIAEIKEALRSEFSIKELGDLKYCLGIEIHRKREK-MIVMNQRAYIKRLAEKSGVDKCKDIYTPADSSAKLMKSSEDEYFVAKYPYRELVGALMYLATSTRPDIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIKGE-LVGYADANWAGDLDTRRSTTGYVFFFNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGTTTIYQENQGCIALAKNPAYHTRTKHIDIKFHFLHEKVESKTVELEYK 940          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 271 bits (694), Expect = 6.990e-78
Identity = 164/430 (38.14%), Postives = 236/430 (54.88%), Query Frame = 1
Query:    1 DDSVARYKARLVAQGFAQVEGKDFFETSAPVARMSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSPFSRDIPFVRRLRKSTN----------------------------------------LLVAVYVGDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITF---GDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLVT*SSTEIEYVAAGEAGKETVYLRELLGSIGF---------GCRGSTKLFEDNKPAINLSKGSGAHCRTKHIGVRWHGIREWI 1131
            D S+ +YKARLVA+GF QVEG D+ +T APV++ +++RTV +L A +D +++ MDV +A+LN  L+EE+++  PP    F  D   V RLRKS                                          L++A+YV D++IAG  R  +D FK  +S+RF M DLGS   +LG+E+ RDR   T++ISQ  YI ++L+ +G   CR V T  E  +K+        + +   Y+  +  LMY   G+RPD+A+AV   ++    P  Q +    R+FRYL    DL +++    + S G    G+ DADWA D+ DR+ST+G    L+GGA+SW S+KQQ +  SSTE EYVA   A KE ++LR LL  +           G + +  L  DN+ A+ L+K S  H RTKHI VR H IR+ I
Sbjct: 1046 DGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPG---FDHDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVENGVILIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEA--TIDPKPYQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSIAQSSTEAEYVALASAAKEALWLRALLDDLAIPASISRSSPGSKVTPLLLVDNQSAMALAKNSTFHDRTKHIAVRHHFIRDEI 1470          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4)

HSP 1 Score: 261 bits (666), Expect = 6.150e-77
Identity = 159/413 (38.50%), Postives = 222/413 (53.75%), Query Frame = 1
Query:   10 VARYKARLVAQGFAQVEGKDFFETSAPVARMSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPE----------------------------CSPF---------SRDIPFVRRLRKSTNLLVAVYVGDLVI-AGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHG---LEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLVT*SSTEIEYVAAGEAGKETVYLRELLGSIGFGCRGSTKLFEDNKPAINLSKGSGAHCRTKHIGVRWHGIRE 1125
            + RYKARLVA+GF QV+G D+ E  APV + +++RT+ +L  E D E+  MDV  A+LN  L+EE+++ LPP                             C+ F         S    F++       ++VAVYV DL+I +   E V + K ++  +F M DLG    +LG+E+ RDRPS T++ISQ +Y  E+L+ +G  +C+  PT  E  V +S         +S  Y+  V  LMY   GT PD+A++V   ++    P  +      R+ RY+    DLG+ F    IG G   +E F+DADWA+D  +R S TGYV  L G  ISW S+KQ     SSTE EY+AA  A KE ++LR  +  +GF     T L+ DN+ AI L K S  H RTKHI VR+H IRE
Sbjct:  265 ILRYKARLVAKGFTQVKGVDYNEMFAPVVKFTSIRTLLALTTELDLEIHQMDVKTAFLNRDLKEEIYMNLPPGFRKPGVIWKLKKGLYGLKQASREWYKKLCTEFESMGFRRCNSNHAVFIKD-DNGIRVVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPME--VGVSLRKLSEAEVDSQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVF----IGSGNTKIEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRE 670          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A284QR55_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284QR55_ARMOS)

HSP 1 Score: 254 bits (648), Expect = 1.780e-76
Identity = 147/418 (35.17%), Postives = 229/418 (54.78%), Query Frame = 1
Query:    1 DDSVARYKARLVAQGFAQVEGKDFFETSAPVARMSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSP--------------------------------------FSRDIPFVRRLRKSTNLLVAVYVGDL-VIAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKV---KISAPDSRGRSGNSTEYKGM-VRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLVT*SSTEIEYVAAGEAGKETVYLRELLGSIGFGCRGSTKLFEDNKPAINLSKGSGAHCRTKHIGVRWHGIRE 1125
            D  + RYKARLVA+GF+Q+ G DFFET APV R+ T R + ++  + +  + GMDV  AYLN  L+E +++  PPE S                                        S    ++R++  S  ++VAV+V D+ ++A   E +   K  + ++  + D+G +  +LG+++ R+   GTIT+SQ +YI +VL+  G ++C+ V    +  V   KI A DSRG +  + +Y    V  LMY + G+RPDIA+AV + ++ +++P  +  +   R+FRYL    D GIT+G       L  + D+DW ED  DR+ST+GYV    GGA++W S+KQ  V  S+ E EY+A     +E ++LR LL  +G    G+T +F DN+ AI  ++    H R+KHI +R H +RE
Sbjct:   39 DGKITRYKARLVAKGFSQIPGTDFFETYAPVVRLDTFRLLMAIAVQRNLIIHGMDVVGAYLNGKLDESIYMAQPPEYSDGSGKAAHLKLMLYGLKQSGRVWNEKLNATFLGLGYTRLMSDQCVYIRQM-DSGPIIVAVHVDDMTLLAPDDETMSNMKEELKKKLNVMDMGEIQYILGMKIDRNWDKGTITLSQKAYILKVLERMGMNDCKPVKMPMDPNVRLEKIPAGDSRGVNTATRQYYHTGVGSLMYAANGSRPDIAHAVTELSKYVQNPAAEHVTALKRVFRYLKGTLDSGITYGRTM--DELIPYSDSDWGEDRADRRSTSGYVCTYAGGAVTWSSKKQPTVALSTMEAEYMALAHTTREVIWLRALLTELGLPPDGATTIFVDNQSAIKFAENPIFHARSKHIDIRHHFVRE 453          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A2G8RW53_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RW53_9APHY)

HSP 1 Score: 267 bits (682), Expect = 3.300e-76
Identity = 165/436 (37.84%), Postives = 235/436 (53.90%), Query Frame = 1
Query:    1 DDSVARYKARLVAQGFAQVEGKDFF--ETSAPVARMSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSPFSRDIPFVRRLRKS----------------------------------------TNLLVAVYVGDLVIAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGV-----PTSAEGKVKISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLVT*SSTEIEYVAAGEAGKETVYLRELLGSIGFGCRGS--TKLFEDNKPAINLSKGSGAHCRTKHIGVRWHGIREWISGRNNGLEMR 1161
            + +V+ +KARLVAQGF+QV G+D+   ET APV+R+ ++RT+ +L A HD+EL  MDV +AYLN  LEE +++  PP  S        V RL+K+                                        + ++VA  V DL IAG  + V+ F  +I QRF M DLG+L  +LGIEVRRD  + TI ISQ SYI   +  +  ++   +     P S  G+ +  +   +        Y+  V  LMY + GTRPD+ +AV   ++ M++P R  +    R+ RYL    +L + +GD +  +GL  F DADW   +E R S +GYV  L+GGAISW S+KQ +V  SSTE EY+A   A KE ++LR +L  +      S   +L  DN+ AI L+K +  H RTKHI +R+H IRE +   N  LE R
Sbjct: 1868 EGTVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILALAARHDWELRQMDVKSAYLNGTLEETVYMHQPPSFS-MPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMLQMGFTRCVADHAVFYKREGESAIIVAASVDDLTIAGTSDLVNAFAADIKQRFEMSDLGNLHWILGIEVRRDCQARTIAISQRSYIDTTVSRFNLEDAAPLSIPLQPGSPLGQHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDVTFAVTALSQFMQNPGRAHWDAIKRVLRYLKGTRELWLVYGDDN--NGLHSFSDADWGSSMEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLADVLHPELSSFPVRLCSDNRSAIALAKDNAFHPRTKHIDIRYHFIREAVDNHNVALEYR 2300          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 266 bits (679), Expect = 6.680e-76
Identity = 164/435 (37.70%), Postives = 234/435 (53.79%), Query Frame = 1
Query:    1 DDSVARYKARLVAQGFAQVEGKDFFETSAPVARMSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPP-ECSP----------------------FSRDIP------------------FVRRLRKSTNLLVAVYVGDLVIAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKIS-----APDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLVT*SSTEIEYVAAGEAGKETVYLRELLGSIGFG--CRGSTKLFEDNKPAINLSKGSGAHCRTKHIGVRWHGIREWISGRNNGLEMR 1161
            +  +  YKARLVAQGF QV G DF ET APVA+++++R + +L A +D+EL  MDV  AYLN  LEEE++++ PP +  P                      F + I                   ++R       LL+A+ V D  IAG +  V  FK  IS RF M DLG +  +LGIEVRRDR + T+++SQ +YI  +L  +   + + + T  +    +S     +   +     +  Y+  +  LMY + GTRPDIAYAV   ++ M++P R  +    R+FRYL+   +  +TFG+ +   G+EGF DADW    E R S +GYV  L+GGA+SW ++KQ +V  SSTE EY+A   A KE ++LR LL  +      R   +L  DNK AI L+K    H RTKHI +R+H IRE +      L+ R
Sbjct:  979 EGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETT--DGVEGFSDADWGS-AEHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADVLHPDILRYPVRLHSDNKSAIALAKDDAYHARTKHIDIRFHFIRETVENGQVILQYR 1410          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 265 bits (678), Expect = 9.580e-76
Identity = 167/433 (38.57%), Postives = 238/433 (54.97%), Query Frame = 1
Query:    1 DDSVARYKARLVAQGFAQVEGKDFFETSAPVARMSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSPFS------------------------------RDIPFVR---------RLRKSTNLLVAVYVGDLVIAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAE-GKV--KISAPDSRGRSGNSTE--YKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLVT*SSTEIEYVAAGEAGKETVYLRELLGSIGFG--CRGSTKLFEDNKPAINLSKGSGAHCRTKHIGVRWHGIREWISGRNNGLEMR 1161
            D S+ ++KARLVAQG+ Q+ G DF ET APVA++S++RT+ +L A +D+ELE M+V +AYLN  L+EE++++ PP  +P                                 ++ F R         +    + ++VA  V  L IAG R+ V +FK  IS RF M DLG++  +LGIEV+RDR + TI ISQ +YI  V   +  +    V T  + G V  +  +P +  +  + +   Y+  V  LMY   GTRPDIA+AV   ++ M++P R  +    R+ RYL    +L + +G      G++GF DADW    E R S +GYV  L+GGAISW S+KQ +V  SSTE EY+A   A KE ++LR LL  I      R    LF DN+ AI L+K +  H RTKHI +R+H IRE +      L+ R
Sbjct: 1021 DGSITQFKARLVAQGYTQMPGVDFNETFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLEHLVCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYKRAGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNLETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNVPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEAVKRVIRYLVGTRELWLVYGTSD--DGIQGFSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHAAKEALWLRYLLSDIIHPDISRYPLTLFSDNRSAIALAKDNAFHPRTKHIDIRFHFIREAVDDEKIILQHR 1451          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL)

HSP 1 Score: 264 bits (675), Expect = 2.190e-75
Identity = 159/420 (37.86%), Postives = 228/420 (54.29%), Query Frame = 1
Query:   10 VARYKARLVAQGFAQVEGKDFFETSAPVARMSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPP---------------------ECSP---------FSRDIPFVR---------RLRKSTNLLVAVYVGDLVIA-GRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRG-----RSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLVT*SSTEIEYVAAGEAGKETVYLRELLGSIGFGC-RGSTKLFEDNKPAINLSKGSGAHCRTKHIGVRWHGIREWI 1131
            + RYKARLVA+GF Q  G DF ET APVA+ +++R + SL A++   L  MDV  A+LN  L+EE+++K P                      + SP         F R I F +         +   S  + V +YV DL++A   ++ +   K  +S+RF M DLG L   LG+EV+RD  SG +++ Q  +++ VL  +G  +C+ V T  +  +K++     G      +     Y+  V  LMY+  GTRPD+A +V   ++   DPC   +    R+ RYL   P  GI F   S G  L G+ DADWA DIE R+ST+GYV  LNGG ISW S+KQ+ V  SSTE EY+A  EA +E V+L+  +  +G     G+  +FEDN+ AI L+K    H RTKHI +R+H +RE +
Sbjct:  924 IERYKARLVAKGFLQKYGVDFEETFAPVAKFTSIRIILSLAAQYKLVLHQMDVKTAFLNGLLDEEIYMKQPDGYIDPKYPNHACKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDSATMFVVIYVDDLILACNNKDLLAATKRALSERFEMSDLGELKYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFGMQDCKPVKTPQDPGLKLTKSMCEGGCKHDETMKDVPYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSGSSDGE-LIGYSDADWAGDIETRRSTSGYVSVLNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKSFMCELGEDSGNGALTVFEDNQGAIALAKNPEFHKRTKHIDIRYHFVREKV 1342          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 250 bits (639), Expect = 1.470e-74
Identity = 154/424 (36.32%), Postives = 228/424 (53.77%), Query Frame = 1
Query:    7 SVARYKARLVAQGFAQVEGKDFFETSAPVARMSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPE-------------------------------CSPFSRDIPFVRR-------LRKSTN---LLVAVYVGDLVIAGRREKVDEFKH---NISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRGRSGNSTE-----YKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLVT*SSTEIEYVAAGEAGKETVYLRELLGSIGFGCRGSTKLFEDNKPAINLSKGSGAHCRTKHIGVRWHGIREWI 1131
            ++A+YKARLVAQGF+Q+ G D+ +T APVA++S++R + +L A  D+EL  MDV  AYLN  LEEE+F+K PP                                C+ F  D+ F R         R   N    +VAV V DL IA     VDE  H    +  +F M DLG +  +LG+E++RDR   TI++ Q +YI  +L  +   + + + T+ +    ++   S        +     Y+  +  LMY + GTRPD++YAV   ++ M++P    +    R+ RYL    +  +T+G  +  +G+EGF DADW    + R+S +GYV  ++GGA+SW S+KQ +V  SSTE EYVA   A KE ++ R  LG I       T L+ DN+ AI L+K +  H RTKHI +R+H IR+ +
Sbjct:   89 AIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFL-DMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIAAN--SVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGDN-ANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIV 507          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G8RWY5_9APHY1.550e-7839.22Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A2P4XRY4_9STRA2.850e-7838.66Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A1M2VV58_TRAPU6.990e-7838.14Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C9VSW1_SPHS46.150e-7738.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284QR55_ARMOS1.780e-7635.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8RW53_9APHY3.300e-7637.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A401GN13_9APHY6.680e-7637.70Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A060S825_PYCCI9.580e-7638.57CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
A0A8K1FHK1_PYTOL2.190e-7537.86Uncharacterized protein n=3 Tax=Pythium oligandrum... [more]
A0A4Y9ZVS1_9AGAM1.470e-7436.32Reverse transcriptase Ty1/copia-type domain-contai... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26110contigH-paniculata_contig26110:2150..3509 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score163.3
Seed ortholog evalue1.6e-37
Seed eggNOG ortholog82508.K1VA87
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3NUZ7@4751,3UY7N@5204,3VGMM@5234,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelTremellales
Best eggNOG OGNA|NA|NA
Exons3
Model size1161
Cds size819
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26110.7134.1prot_H-paniculata_contig26110.7134.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig26110 2393..3410 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929780.2031608-UTR-H-paniculata_contig26110:2149..23921622929780.2031608-UTR-H-paniculata_contig26110:2149..2392Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26110 2150..2392 -
1691481007.5148864-UTR-H-paniculata_contig26110:2149..23921691481007.5148864-UTR-H-paniculata_contig26110:2149..2392Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26110 2150..2392 -
1622929780.281334-UTR-H-paniculata_contig26110:3410..35091622929780.281334-UTR-H-paniculata_contig26110:3410..3509Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26110 3411..3509 -
1691481007.5552192-UTR-H-paniculata_contig26110:3410..35091691481007.5552192-UTR-H-paniculata_contig26110:3410..3509Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26110 3411..3509 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929780.216258-CDS-H-paniculata_contig26110:2392..27501622929780.216258-CDS-H-paniculata_contig26110:2392..2750Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26110 2393..2750 -
1691481007.5267897-CDS-H-paniculata_contig26110:2392..27501691481007.5267897-CDS-H-paniculata_contig26110:2392..2750Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26110 2393..2750 -
1622929780.232307-CDS-H-paniculata_contig26110:2825..31061622929780.232307-CDS-H-paniculata_contig26110:2825..3106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26110 2826..3106 -
1691481007.5368044-CDS-H-paniculata_contig26110:2825..31061691481007.5368044-CDS-H-paniculata_contig26110:2825..3106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26110 2826..3106 -
1622929780.265644-CDS-H-paniculata_contig26110:3230..34101622929780.265644-CDS-H-paniculata_contig26110:3230..3410Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26110 3231..3410 -
1691481007.5460086-CDS-H-paniculata_contig26110:3230..34101691481007.5460086-CDS-H-paniculata_contig26110:3230..3410Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26110 3231..3410 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig26110.7134.1

>prot_H-paniculata_contig26110.7134.1 ID=prot_H-paniculata_contig26110.7134.1|Name=mRNA_H-paniculata_contig26110.7134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=273bp
MSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSPFSRD
IPFVRRLRKSTNLLVAVYVGDLVIAGRREKVDEFKHNISQRFRMKDLGSL
SRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKI
SAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQ
DFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTT
GYVVKLNGGAISWCSRKQQLVT*
back to top

mRNA from alignment at H-paniculata_contig26110:2150..3509-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig26110.7134.1 ID=mRNA_H-paniculata_contig26110.7134.1|Name=mRNA_H-paniculata_contig26110.7134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1360bp|location=Sequence derived from alignment at H-paniculata_contig26110:2150..3509- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGACAGCGTGGCACGCTACAAAGCGCGACTGGTGGCTCAAGGATTTGC ACAGGTGGAGGGTAAAGATTTCTTCGAAACCAGTGCCCCCGTAGCTCGCA TGTCGACGTTACGTACTGTTTTTAGCCTGGTCGCCGAACATGATTTCGAA TTAGAAGGCATGGACGTAGATGCGGCGTATTTGAACGCCCCATTAGAAGA GGAGCTGTTTGTTAAGCTACCCCCCGAGTGTTCCCCTTTCTCCCGAGACA TACCATTTGTGCGCCGCCTGCGTAAAAGCGTGTACGGCCTCAAGCAGAGC GGCGGAAACTGGAATAACACTCTTGACGATTTTTTTGTTGGGATAGGGTT CGAACGTTCCACTACTGACTCATGCTTGTACTTTTCCCACGACGATGGGA GAGACAAACCTTCTGGTGGCCGTGTATGTTGGCGACCTGGTCATTGCTGG CCGTCGTGAGAAAGTAGACGAGTTCAAGCATAACATAAGTCAGCGTTTTA GGATGAAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGA CGTGACCGCCCTAGTGGTACCATAACCATCTCGCAGGGTAGCTACATTCG CGAGGTATTAAAAACATACGGTTTTGACGAGTGTCGAGGAGTACCCACCT CTGCAGAGGGAAAAGTGAAGATTTCGGCACCCGAGTCGGCCGACAAGCCC TCCGAACCGAAGTCACTTGGAGCTGTACTGTCGGACATAGGCGCAGGAGT ACCAGAAAGCAGCAGAGGGAGAAGTGGCAATTCGACTGAATACAAAGGCA TGGTAAGATTACTTATGTACGTCTCGACAGGAACTAGACCTGATATAGCA TACGCGGTACACCAAGCAGCACGTCGTATGGAGGACCCATGTCGGCAAGA CTTCAGTACATGCAATCGCATTTTTCGTTATCTCAGTACTGTGCCTGACC TTGGCATTACGTTCGGCGATAAGAGTATTGGTCACGGCCTGGAAGGATTC GTTGATGCCGATTGGGCGGAAGATATCGAGGACCGAAAGTCCACAACAGG ATACGTTGTCAAGCTGAACGGTGGTGCAATAAGTTGGTGCTCTAGAAAGC AACAGTTAGTCACGTGATCCAGTACAGAGATAGAGTACGTTGCTGCAGGA GAAGCGGGAAAGGAGACGGTATATCTTAGGGAGTTACTAGGATCGATAGG TTTCGGATGCAGGGGGAGCACGAAATTGTTTGAGGACAATAAACCAGCTA TTAATCTCAGTAAGGGATCTGGCGCACACTGCAGGACAAAGCACATCGGA GTGCGCTGGCACGGAATTCGAGAGTGGATTTCGGGAAGGAATAATGGCCT TGAAATGCGT
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig26110:2150..3509-

>mRNA_H-paniculata_contig26110.7134.1 ID=mRNA_H-paniculata_contig26110.7134.1|Name=mRNA_H-paniculata_contig26110.7134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1638bp|location=Sequence derived from alignment at H-paniculata_contig26110:2150..3509- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGACGTTACGTACTGTTTTTAGCCTGGTCGCCGAACATGATTTCGA
ATTAGAAGGCATGGACGTAGATGCGGCGTATTTGAACGCCCCATTAGAAG
AGGAGCTGTTTGTTAAGCTACCCCCCGAGTGTTCCCCTTTCTCCCGAGAC
ATACCATTTGTGCGCCGCCTGCGTAAAAGCATGTCGACGTTACGTACTGT
TTTTAGCCTGGTCGCCGAACATGATTTCGAATTAGAAGGCATGGACGTAG
ATGCGGCGTATTTGAACGCCCCATTAGAAGAGGAGCTGTTTGTTAAGCTA
CCCCCCGAGTGTTCCCCTTTCTCCCGAGACATACCATTTGTGCGCCGCCT
GCGTAAAAGCACAAACCTTCTGGTGGCCGTGTATGTTGGCGACCTGGTCA
TTGCTGGCCGTCGTGAGAAAGTAGACGAGTTCAAGCATAACATAAGTCAG
CGTTTTAGGATGAAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGA
AGTACGACGTGACCGCCCTAGTGGTACCATAACCATCTCGCAGGGTAGCT
ACATTCGCGAGGTATTAAAAACATACGGTTTTGACGAGTGTCGAGGAGTA
CCCACCTCTGCAGAGGGAAAAGTGAAGATTTCGGCACCCGAACAAACCTT
CTGGTGGCCGTGTATGTTGGCGACCTGGTCATTGCTGGCCGTCGTGAGAA
AGTAGACGAGTTCAAGCATAACATAAGTCAGCGTTTTAGGATGAAAGACT
TGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGACGTGACCGCCCT
AGTGGTACCATAACCATCTCGCAGGGTAGCTACATTCGCGAGGTATTAAA
AACATACGGTTTTGACGAGTGTCGAGGAGTACCCACCTCTGCAGAGGGAA
AAGTGAAGATTTCGGCACCCGACAGCAGAGGGAGAAGTGGCAATTCGACT
GAATACAAAGGCATGGTAAGATTACTTATGTACGTCTCGACAGGAACTAG
ACCTGATATAGCATACGCGGTACACCAAGCAGCACGTCGTATGGAGGACC
CATGTCGGCAAGACTTCAGTACATGCAATCGCATTTTTCGTTATCTCAGT
ACTGTGCCTGACCTTGGCATTACGTTCGGCGATAAGAGTATTGGTCACGG
CCTGGAAGGATTCGTTGATGCCGATTGGGCGGAAGATATCGAGGACCGAA
AGTCCACAACAGGATACGTTGTCAAGCTGAACGGTGGTGCAATAAGTTGG
TGCTCTAGAAAGCAACAGTTAGTCACGTGACAGCAGAGGGAGAAGTGGCA
ATTCGACTGAATACAAAGGCATGGTAAGATTACTTATGTACGTCTCGACA
GGAACTAGACCTGATATAGCATACGCGGTACACCAAGCAGCACGTCGTAT
GGAGGACCCATGTCGGCAAGACTTCAGTACATGCAATCGCATTTTTCGTT
ATCTCAGTACTGTGCCTGACCTTGGCATTACGTTCGGCGATAAGAGTATT
GGTCACGGCCTGGAAGGATTCGTTGATGCCGATTGGGCGGAAGATATCGA
GGACCGAAAGTCCACAACAGGATACGTTGTCAAGCTGAACGGTGGTGCAA
TAAGTTGGTGCTCTAGAAAGCAACAGTTAGTCACGTGA
back to top