prot_H-paniculata_contig26110.7134.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26110.7134.1
Unique Nameprot_H-paniculata_contig26110.7134.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length273
Homology
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 175 bits (444), Expect = 4.520e-46
Identity = 104/311 (33.44%), Postives = 164/311 (52.73%), Query Frame = 0
Query:    2 STLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPP----------------------------ECSPFSRDIPFVR---------RLRKSTNLLVAVYVGDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITF---GDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLV 271
            +++RTV +L A +D +++ MDV +A+LN  L+EE+++  PP                            +      D+ F R         ++     L++A+YV D++IAG  R  +D FK  +S+RF M DLGS   +LG+E+ RDR   T++ISQ  YI ++L+ +G   CR V T  E  +K+        + +   Y+  +  LMY   G+RPD+A+AV   ++    P  Q +    R+FRYL    DL +++    + S G    G+ DADWA D+ DR+ST+G    L+GGA+SW S+KQQ +
Sbjct: 1080 ASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFDHDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVENGVILIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEA--TIDPKPYQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSI 1388          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 173 bits (439), Expect = 2.080e-45
Identity = 101/309 (32.69%), Postives = 159/309 (51.46%), Query Frame = 0
Query:    2 STLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSPFSRDIP-FVRRLRKS----------------------------------------TNLLVAVYVGDLVI-AGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQ 268
            ST+RT+ +L A HD E+  MDV +A+LN  L+EE+++     C P   D P  V RLRK+                                        + ++VA+YV D++I A +   +D  K ++ ++F M DLG    VL +E+ RDRP+ T+ +SQ  Y+  +L+ +G  +CR V T      K++  D      +   Y+  +  LMY   GTRPD+AYA+   ++    P  + ++   R++RYL    D+ + +   S G  ++G+VDADW  D  DR+S TG+V  + GGA+SW S+KQ
Sbjct: 1040 STIRTLLALAAAHDLEIHQMDVKSAFLNGDLDEEIYMA----CPPGFEDRPDIVWRLRKALYGLKQASRQWYKKIRAEFESLGFKRSDADHGVFYKEVDGSLVIVALYVDDMLIFADKVSAIDSVKASLKEKFDMTDLGEAHWVLNMEIIRDRPNRTLELSQRQYVETILERFGMTDCRPVSTPMAANQKLAKLDEA--EVDEKRYQSALGSLMYAMLGTRPDLAYAIGTLSKHAATPGEEHWTALMRVYRYLRKTTDVRLVYCGNSPGELVQGYVDADWGSDPMDRRSVTGHVFLIAGGAVSWSSKKQ 1342          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A6S7IYL0_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IYL0_PARCT)

HSP 1 Score: 169 bits (427), Expect = 2.330e-45
Identity = 91/271 (33.58%), Postives = 158/271 (58.30%), Query Frame = 0
Query:    3 TLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSPFSRDIPFVRRLRKSTNL-LVAVYVGDLVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLV 271
            ++RTV +L  +   +L  +DV AA+LN  LE+E++VK          ++   +   +  ++ +VA++V D+++AG+  EK+ + K +I++RF++KD+G L  +LG++V ++   G + I Q +Y   ++K Y  + C+ V T      K+ +        N  EY+  V  L+Y+S+ TRPDI +AV+  A+   +P  + ++   RIFRYL    + G+ + + +      GF DADWA D+ DRKST+GY  ++NG A+SW S+K+  V
Sbjct:  135 SIRTVIALSVQKGLKLHQVDVTAAFLNGELEDEVYVK-----QSEGLEVKGKQTSEEDGDIFIVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELQYILGLQVIQE--DGKVWIGQPTYTASIIKKYDMENCKPVETHVNLSSKLVSAMEDSELFNKEEYQSAVVSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENA-SPDCVGFSDADWAGDLNDRKSTSGYRFQINGAAVSWRSKKKTCV 397          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A2P4XRY4_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRY4_9STRA)

HSP 1 Score: 170 bits (431), Expect = 2.110e-44
Identity = 99/270 (36.67%), Postives = 148/270 (54.81%), Query Frame = 0
Query:    3 TLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSPFSRDIPFVRRLRKSTNLLVAVYVGDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLV 271
            ++  V ++ AE D E E +DVD A+L   +EEEL++  P   +     I      + ST  +V VYV DL+I  R ++ + E K  +   F +K+LG L   LGIE+ R R    I ++Q +YI+ + +  G D+C+ + T A+   K+              Y+ +V  LMY++T TRPDIAYAV + A+  E   +  +    RI +YL T  D+G+ F     G  L G+ DA+WA D++ R+STTGYV   NG AISW S++Q  V
Sbjct:  590 SINAVAAIAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFADQPTRIRSACWDKNSTYSIVIVYVDDLMIFSRTKDDIAEIKEALRSEFSIKELGDLKYCLGIEIHRKREK-MIVMNQRAYIKRLAEKSGVDKCKDIYTPADSSAKLMKSSEDEYFVAKYPYRELVGALMYLATSTRPDIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIKGE-LVGYADANWAGDLDTRRSTTGYVFFFNGSAISWKSKRQPTV 857          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A7R9V9Z0_9CHLO (Hypothetical protein n=2 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V9Z0_9CHLO)

HSP 1 Score: 169 bits (429), Expect = 3.080e-44
Identity = 107/305 (35.08%), Postives = 157/305 (51.48%), Query Frame = 0
Query:    4 LRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPP----------EC-----------SPFSRDIPFVRRLRK----------------STNLLVAVYVGDLVIAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLV 271
            +R + + VAEHD EL+ +DV  A+L A L+E+L++  PP          +C           +P +  + F R L K                 T LLV  +V D +I G R +VDE K  +   F +KDLG +S  +G+ V RDR + T+ + Q + I  VL+ +  +EC+         +     D+  +   +T Y+ MV  L+YV+  TRPDI+Y V   ++ M  PC Q  S    + +YL     LGI FG      GL+G+VD+DWA D  DRKS TG+V  LNGGA++W S+ Q +V
Sbjct:  436 IRLMLAWVAEHDLELDSVDVKTAFLQASLQEKLWMDQPPGFEDLIQPHAKCELLKALYGLKQAPRAWYLTFKRELEKMGFQQSPVDSTLYEKQGTRLLV--HVDDGLIGGTRAEVDEVKAALRAVFDIKDLGPVSSFVGMRVTRDREARTLKLDQETMITSVLERFNMEECKPAKLPMIDGLDGMQGDALDQV-EATTYREMVGSLIYVAVNTRPDISYGVSTLSKNMARPCSQHMSAAKHLLKYLQGTKGLGIVFGQNQ-EEGLQGYVDSDWASDKSDRKSRTGFVFTLNGGALAWGSQTQSVV 736          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A2N9GKY6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GKY6_FAGSY)

HSP 1 Score: 167 bits (423), Expect = 3.390e-44
Identity = 100/276 (36.23%), Postives = 159/276 (57.61%), Query Frame = 0
Query:    2 STLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSPFSRDIPFVRRLRKSTNLLVAVYVGDLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISA---PDSRGRSGNSTE--YKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLV 271
            +++R V +LVA+ D ELE +DV  A+L+  LEEE+F+     C        +VR L  S+ + + +Y+ D++IA R   +VD  K  + + F MKDLG+  ++LG+E+RRDR +  + +SQ +YIR+VL+ +   + + V T      ++S+   P +     + T   Y   V  LMY    TRPD+A+AV   +R M +P R+ ++    IFRYL    + GI F  +   + + G+VDA++  D++DR+STTGY+  L GG I W S  Q +V
Sbjct:  131 TSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMIGYTRCEYDC--CVYVRILEDSSYIFLLLYLDDMLIAARSMCEVDRLKSLLYKEFEMKDLGAAKKILGMEIRRDREARKLWLSQKNYIRKVLENFSMLDAKLVSTPLANHFRLSSNQCPKNVEEIEDMTRVPYASAVGCLMYAMVCTRPDLAHAVSIISRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVIGYVDANYVGDVDDRRSTTGYLFTLLGGPICWKSTLQSIV 404          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A2N9EIR8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EIR8_FAGSY)

HSP 1 Score: 168 bits (425), Expect = 1.490e-43
Identity = 98/276 (35.51%), Postives = 159/276 (57.61%), Query Frame = 0
Query:    2 STLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSPFSRDIPFVRRLRKSTNLLVAVYVGDLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISA---PDSRGRSGNSTE--YKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLV 271
            +++R V +LVA  D ELE +DV  A+L+  LEEE+F++ P     F +           + + + +YV D++IA +   +V+  K  + + F MKDLG+  ++LG+E+RRDR +  + +SQ +YIR+VL+ +   + + V T      ++S+   P +     N ++  Y   V  LMY    TRPD+A+AV   +R M +P R+ ++    IFRYL    + GI F  +   + + G+VDAD+A +++DR+STTGYV  L+GG I W S  Q +V
Sbjct:  784 TSIRAVLTLVANQDLELEQLDVKTAFLHGNLEEEIFMEQP---EGFKQP--------DGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGAAKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPRREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIV 1048          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A6H5H298_9HEMI (CCHC-type domain-containing protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5H298_9HEMI)

HSP 1 Score: 167 bits (424), Expect = 1.750e-43
Identity = 99/309 (32.04%), Postives = 159/309 (51.46%), Query Frame = 0
Query:    1 MSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPEC------------------SP---------------FSR---DIPFVRRLRKSTNLLVAVYVGDLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLVT 272
            +ST RT+ S+V E ++E+E MDV  A+L+  L+E +F+ LP E                   SP               F R   D     ++     +   +YV DL+IA     ++  FK  + Q F M +LG++   LG+EV RDR  G I + Q +YI ++L+ +   +C+ + T  E  ++++   S         Y+ +V  LMY+  G+RPDI++A++  +R  E    + ++   R+ RYL     LG+TF   +  + +E +VDADWA D EDRKS TG++V + G  +SW +RKQ  V+
Sbjct:  509 LSTFRTLISIVNEFNYEMEQMDVKTAFLHGDLKETIFMNLPEEMAEKNHVCKLNRSIYGLKQSPKNWYEKFDEFMLKENFKRSYHDSCLYSKITPKFKIYCFIYVDDLIIASDSLIQMKNFKSKLYQNFDMVNLGNVKSFLGLEVERDRDKGIIKLHQSAYINQLLRKFQMQDCKEISTPIEKNLRLNKAKS-DEEKTEEPYRQLVGCLMYLMIGSRPDISFALNYFSRYQEYATNEHWTHLKRVLRYLKATNRLGLTFSRNNCENLIESYVDADWANDFEDRKSVTGFLVNVFGNIVSWGTRKQSTVS 816          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM)

HSP 1 Score: 167 bits (423), Expect = 2.860e-43
Identity = 109/313 (34.82%), Postives = 157/313 (50.16%), Query Frame = 0
Query:    2 STLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPP----------------------------ECSPFSRDIPFVR-----------RLRKSTNLLVAVYVGDLVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGV--PTSAEGKV-KISAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLV 271
            ++LRT+ +L A+HD EL  MDV  AYLN  LEEE++++ PP                                  RD+ + R           R    T L++ +YV D+  A    E + + K  +S+ F + DLG +  +LG+EV RDR    +T+SQ  YI +VL+ +GF + R +  P S   K+ K+ A +   R     +Y+  V  LMY   GTRPDIAYAV   ++    P  + ++   R F+YL    D  + +  K     L G+VD+DWA D  DR+S +GYV  L G AISW S+KQQ V
Sbjct:  986 NSLRTLLALTAKHDLELHQMDVKTAYLNGDLEEEIYMEPPPGFRGDGNIVWRLIKSIYGLKQAGRVWYMRIEREFRDLGYSRSYADYGVFVFHRDSDGTLLIIIIYVDDIGAASNSMEAILQAKARLSKIFEITDLGEMRWILGMEVTRDRALKIVTLSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPAAEIDAR-----KYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSV 1293          
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Match: A0A6A2Z3I3_HIBSY (Protein STRUBBELIG-RECEPTOR FAMILY 1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Z3I3_HIBSY)

HSP 1 Score: 167 bits (422), Expect = 3.890e-43
Identity = 92/280 (32.86%), Postives = 164/280 (58.57%), Query Frame = 0
Query:    1 MSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPE-CSPFSR--DIPFVRRLRKSTNLLVAVYVGDLVIAG-RREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKISAPDSRGRSGNSTE-----YKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQDFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTTGYVVKLNGGAISWCSRKQQLV 271
            ++T+R + ++ A  +  LE +DV  A+L+  LEE++++  P + C+ F R  D  FV         ++ +YV D+++AG  ++ ++E K  +++ F MKDLGS +++LG+++ RDR +  I +SQ +Y++++L  +   +C+ + T      K+S+  S        E     Y   V  LM+    TRPDIA AV   +R M +P ++ ++T  RI RY+    ++ + +G  ++   + G+VD+D+A D++  KSTTGYV K+ GGA+SW S+ Q +V
Sbjct:  844 LTTVRVLLAMCATLNLHLEQLDVKTAFLHGNLEEKIYMLQPEDPCAYFKRSGDNDFV---------ILLLYVDDMLVAGPNKDHIEELKVQLAREFEMKDLGSANKILGMQIHRDRSNRKIWLSQKNYLKKILSRFSMQDCKQISTPLPINFKLSSSMSPSNEEERMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMVNPGKEHWNTVKRIMRYIKGTSNVALCYGGSNLL--INGYVDSDYAGDLDKSKSTTGYVFKIAGGAVSWVSKLQSVV 1112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26110.7134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M2VV58_TRAPU4.520e-4633.44Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y9XTU1_9APHY2.080e-4532.69Integrase catalytic domain-containing protein n=1 ... [more]
A0A6S7IYL0_PARCT2.330e-4533.58Uncharacterized protein (Fragment) n=1 Tax=Paramur... [more]
A0A2P4XRY4_9STRA2.110e-4436.67Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A7R9V9Z0_9CHLO3.080e-4435.08Hypothetical protein n=2 Tax=Chlamydomonas euryale... [more]
A0A2N9GKY6_FAGSY3.390e-4436.23Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9EIR8_FAGSY1.490e-4335.51Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A6H5H298_9HEMI1.750e-4332.04CCHC-type domain-containing protein n=1 Tax=Nesidi... [more]
A0A4Y9ZJA2_9AGAM2.860e-4334.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A2Z3I3_HIBSY3.890e-4332.86Protein STRUBBELIG-RECEPTOR FAMILY 1 n=1 Tax=Hibis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 58..142
e-value: 1.2E-15
score: 57.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 62..269
NoneNo IPR availablePANTHERPTHR11439:SF242coord: 62..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26110contigH-paniculata_contig26110:2393..3410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26110.7134.1mRNA_H-paniculata_contig26110.7134.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26110 2150..3509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26110.7134.1 ID=prot_H-paniculata_contig26110.7134.1|Name=mRNA_H-paniculata_contig26110.7134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=273bp
MSTLRTVFSLVAEHDFELEGMDVDAAYLNAPLEEELFVKLPPECSPFSRD
IPFVRRLRKSTNLLVAVYVGDLVIAGRREKVDEFKHNISQRFRMKDLGSL
SRVLGIEVRRDRPSGTITISQGSYIREVLKTYGFDECRGVPTSAEGKVKI
SAPDSRGRSGNSTEYKGMVRLLMYVSTGTRPDIAYAVHQAARRMEDPCRQ
DFSTCNRIFRYLSTVPDLGITFGDKSIGHGLEGFVDADWAEDIEDRKSTT
GYVVKLNGGAISWCSRKQQLVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like