mRNA_H-paniculata_contig26106.7131.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26106.7131.1 vs. uniprot
Match: A0A0W0FT70_9AGAR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Moniliophthora roreri TaxID=221103 RepID=A0A0W0FT70_9AGAR) HSP 1 Score: 102 bits (253), Expect = 1.460e-20 Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = 3
Query: 471 SQILPRMHLTRDRLRRELKIDQHLYAQIIADCFRFVKTSMFPAMVA-GEPVSKEDGPRDQEEVQETRVFPYREAMGALMWAATMTRPDIAYAVRTIANFCENPGMAHKKAVEKILQYVLRAADLGITYGDQNAEIKMLAYADSDYAACPDSWRSAS 935
SQ+L M +TRDR + +Q LY I +CF P +A G +SK P EE PY+ A+G++M AA MTRPDI++A + +A F +NPG AH AV++I+QY+ +L +T G + + A++DS++A PD +S S
Sbjct: 202 SQLLG-MTVTRDRAAYTISFNQSLYIDSIVECFGLGSAHPSPTPIAHGTKLSKTQSPTTLEEQSTMAKVPYQSAVGSIMHAAVMTRPDISHACQCVAQFMQNPGEAHWTAVKQIIQYLKGTRNLSLTLGGASKSFDITAWSDSNFAGHPDHGQSVS 356
BLAST of mRNA_H-paniculata_contig26106.7131.1 vs. uniprot
Match: V2WM27_MONRO (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora roreri (strain MCA 2997) TaxID=1381753 RepID=V2WM27_MONRO) HSP 1 Score: 97.8 bits (242), Expect = 2.470e-20 Identity = 55/150 (36.67%), Postives = 85/150 (56.67%), Query Frame = 3
Query: 471 SQILPRMHLTRDRLRRELKIDQHLYAQIIADCFRFVKTSMFPA-MVAGEPVSKEDGPRDQEEVQETRVFPYREAMGALMWAATMTRPDIAYAVRTIANFCENPGMAHKKAVEKILQYVLRAADLGITYGDQNAEIKMLAYADSDYAACPD 917
SQ+L M +T+DR R + +Q LY I +CF P +V +SK P EE PY+ A+G++M+A MTRPDI+YA + +A F +NPG AH AV++I++Y+ +L +T G + + + A+ DS++A PD
Sbjct: 88 SQLLG-MTVTQDRAARTISFNQSLYIDSIVECFGLGSARPSPTPIVHSTKLSKTQSPTTLEEQSTMAKVPYQSAVGSIMYATVMTRPDISYACQHVAQFMQNPGEAHWTAVKQIIRYLKGTRNLSLTLGGASKSLDVTAWLDSNFAGHPD 236
BLAST of mRNA_H-paniculata_contig26106.7131.1 vs. uniprot
Match: A0A0W0GD39_9AGAR (Integrase catalytic domain-containing protein n=1 Tax=Moniliophthora roreri TaxID=221103 RepID=A0A0W0GD39_9AGAR) HSP 1 Score: 101 bits (251), Expect = 6.010e-20 Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = 3
Query: 471 SQILPRMHLTRDRLRRELKIDQHLYAQIIADCFRFVKTSMFPA-MVAGEPVSKEDGPRDQEEVQETRVFPYREAMGALMWAATMTRPDIAYAVRTIANFCENPGMAHKKAVEKILQYVLRAADLGITYGDQNAEIKMLAYADSDYAACPD-SWRSASGRTVLGRDLLAF 971
SQ+L M +T+DR R + +Q LY I +CF P +V +SK P EE PY+ A+G++M+A MTRPDI+YA + +A F +NPG AH AV++I++Y+ +L +T G + + + A+ DS++A PD W + LGR ++
Sbjct: 803 SQLLG-MTVTQDRAARTISFNQSLYIDSIVECFGLGSARPSPTPIVHSTKLSKTQSPTTLEEQSTMAKVPYQSAVGSIMYATVMTRPDISYACQHVAQFMQNPGEAHWTAVKQIIRYLKGTRNLSLTLGGASKSLDVTAWLDSNFAGHPDHGWSVSEYALFLGRGCFSW 970
BLAST of mRNA_H-paniculata_contig26106.7131.1 vs. uniprot
Match: A0A8J2WCA4_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WCA4_9CRUS) HSP 1 Score: 100 bits (249), Expect = 1.160e-19 Identity = 57/157 (36.31%), Postives = 87/157 (55.41%), Query Frame = 3
Query: 489 MHLTRDRLRRELKIDQHLYAQIIADCFRFVKTSMFPAMVAGEPVSK---EDGPRDQEEVQETRVFPYREAMGALMWAATMTRPDIAYAVRTIANFCENPGMAHKKAVEKILQYVLRAADLGITYGDQNAEIKMLAYADSDYAACPDSWRSASGRTVL 950
+ +TR R ++L + Q LY + + + F + P V EP S+ +D P E PYR+A+G+LM+A MTRPDIA+AV ++ F NPG H +AV++IL Y+ G+ + + + L Y+DSDYA CPD+ RS +G +
Sbjct: 1110 LEITRIRSEKKLFVCQSLYIEKLLEIFNM--QNCIPKTVPAEPGSRLTVKDSPTTVTEQSSMSSTPYRQAVGSLMYAMIMTRPDIAFAVGQVSRFSVNPGPVHWEAVKRILSYLAGTPRHGLCFTGTDLSNQFLGYSDSDYAGCPDTRRSTTGTLFI 1264
BLAST of mRNA_H-paniculata_contig26106.7131.1 vs. uniprot
Match: UPI001D00A395 (secreted RxLR effector protein 161-like n=2 Tax=Cotesia glomerata TaxID=32391 RepID=UPI001D00A395) HSP 1 Score: 96.3 bits (238), Expect = 1.260e-19 Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 3
Query: 594 PAMVAGEPVSKEDGPRDQEEVQETRVFPYREAMGALMWAATMTRPDIAYAVRTIANFCENPGMAHKKAVEKILQYVLRAADLGITYGDQNAEIKMLAYADSDYAACPDSWRSASGRTVL 950
P + EP S +E ++ + PYREA+G+L++AA +TRPDI YAV T++ F +N H AV+KI +Y++ D GI YG ++ ++ Y D+DYA CPD+ RS SG +
Sbjct: 6 PVNIPAEPGSILSKSAGSQEARDPGI-PYREAVGSLLFAARVTRPDIEYAVNTVSQFVDNYNNTHWSAVKKIFRYLVGTIDCGIIYGASGSDESLVGYTDADYAGCPDTRRSRSGYVFM 123
BLAST of mRNA_H-paniculata_contig26106.7131.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM) HSP 1 Score: 94.7 bits (234), Expect = 1.320e-19 Identity = 55/155 (35.48%), Postives = 84/155 (54.19%), Query Frame = 3
Query: 489 MHLTRDRLRRELKIDQHLYAQIIADCFRFVK-TSMFPAMVAGEPVSKEDGPRDQEEVQETRVFPYREAMGALMWAATMTRPDIAYAVRTIANFCENPGMAHKKAVEKILQYVLRAADLGITYG-DQNAEIKMLAYADSDYAACPDSWRSASGRTV 947
+ + RDR +R L + Q Y I + F T++ + G +SK P+D EE+ + PYR+ +GALM+ A TRPDI+YAV +A F NPG H KA + + +Y+ D+ +TY D +A ++D+D+ D+ RS SG V
Sbjct: 36 VRVERDRSKRLLSLSQRQYITDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSGMVV 190
BLAST of mRNA_H-paniculata_contig26106.7131.1 vs. uniprot
Match: A0A0J7KA47_LASNI (Retroelement pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KA47_LASNI) HSP 1 Score: 99.8 bits (247), Expect = 2.050e-19 Identity = 59/154 (38.31%), Postives = 88/154 (57.14%), Query Frame = 3
Query: 495 LTRDRLRRELKIDQHLYAQIIADCFRFVKTSMFPAMVAGEP-VSKEDGPRDQEEVQETRVFPYREAMGALMWAATMTRPDIAYAVRTIANFCENPGMAHKKAVEKILQYVLRAADLGITYGDQNAEIKMLAYADSDYAACPDSWRSASGR-TVL 950
+ RDR ++ +KI Q Y +A+ F + +SK P D + Q P+REA+G+LM+AA ++RPDI +AV ++ + ENPG H +AV++I++Y A GI Y QN ++ Y+DSDYA+ PD+ RS SG TVL
Sbjct: 948 IKRDRSKKTIKISQCNYLLRVAEKFGMMDAKGISTPAESHMYLSKSMAPEDDDGKQAMAKIPFREAVGSLMFAACVSRPDIMFAVSVVSRYLENPGPEHWQAVKRIIRYAKETATYGIVYDGQNTN-GLIVYSDSDYASDPDTRRSTSGYITVL 1100
BLAST of mRNA_H-paniculata_contig26106.7131.1 vs. uniprot
Match: V2XQZ8_MONRO (Gag-pol polyprotein n=1 Tax=Moniliophthora roreri (strain MCA 2997) TaxID=1381753 RepID=V2XQZ8_MONRO) HSP 1 Score: 99.0 bits (245), Expect = 3.800e-19 Identity = 64/171 (37.43%), Postives = 95/171 (55.56%), Query Frame = 3
Query: 471 SQILPRMHLTRDRLRRELKIDQHLYAQIIADCFRFVKTSMFPA---MVAGEPVSKEDGPRDQEEVQETRVFPYREAMGALMWAATMTRPDIAYAVRTIANFCENPGMAHKKAVEKILQYVLRAADLGITYGDQNAEIKMLAYADSDYAACPDSWRSASGRTV-LGRDLLAF 971
SQ+L M +TRDR + +Q LY I + RF S P+ +V G +SK P EE PY+ A+G++M AA MTRPDI++A + +A F +NPG AH V++I+ Y+ +L +T G + + A++DSD+A PD RS SG + LGR ++
Sbjct: 1075 SQLLG-MTVTRDRPAPTISFNQSLYIDSIVE--RFGLGSAHPSSTPIVHGTKLSKTQSPTTLEEQSMMAKVPYQSAVGSIMHAAVMTRPDISHACQCVAQFMQNPGEAHWTTVKQIIWYLKSTRNLSLTLGGASKSFDVTAWSDSDFAGHPDHGRSVSGYALFLGRGCFSW 1242
BLAST of mRNA_H-paniculata_contig26106.7131.1 vs. uniprot
Match: A0A061DHR4_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8, putative n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061DHR4_THECC) HSP 1 Score: 98.2 bits (243), Expect = 4.190e-19 Identity = 60/174 (34.48%), Postives = 94/174 (54.02%), Query Frame = 1
Query: 1 WTQVERPENKLIVGTMMLYQRKLGADGNVEKYNCRLVAHGDHQ--------IKGVLYEKGVITCAYRGQHENGIPGAVGI---LHKAIYGLVEAGRCWSIKIPEDLKTLGFEMSRADPCVVRKIIHEEVRVIGVIHVDDFLITNKGSVIMEQLLADLQSKYRIKDLGEVKYYLG 489
WT V P +G +Y+ KL A+G VE+Y RLVA G +Q + G L E +T Q + P V + LHK++YGL ++ R W+ K L GF S AD + K+ + ++ +++VDD +I + S EQ++ L+SK+++KDLG++KY+LG
Sbjct: 116 WTVVPLPHGAHTIGCKWVYKVKLNANGTVERYKARLVAKGYNQKEDIDNAFLNGDLDEDIYMTLPQGYQIKGEFPSNVKLVCKLHKSLYGLKQSSRQWNAKFTSVLLEFGFCQSLADYALFVKMTTNDEILVLLVYVDDIIIASSSSNATEQIIEFLKSKFKLKDLGKLKYFLG 289
BLAST of mRNA_H-paniculata_contig26106.7131.1 vs. uniprot
Match: UPI001E1BCD31 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BCD31) HSP 1 Score: 94.0 bits (232), Expect = 9.720e-19 Identity = 46/114 (40.35%), Postives = 71/114 (62.28%), Query Frame = 3
Query: 609 GEPVSKEDGPRDQEEVQETRVFPYREAMGALMWAATMTRPDIAYAVRTIANFCENPGMAHKKAVEKILQYVLRAADLGITYGDQNAEIKMLAYADSDYAACPDSWRSASGRTVL 950
G P++ P+ Q+E +E + PY+EA+GAL++ +T TRPDI+YAV +A F +NPG+ H KAV++I++Y+ GI Y + E+ + Y D+DY D S SG +L
Sbjct: 14 GLPLTSSMSPQQQKEKEEMKNIPYKEAVGALLYLSTTTRPDISYAVGQVAKFSQNPGIQHWKAVKRIIRYIAGTRTYGILYSQEKGEM-VTGYTDADYGGDLDDRTSTSGCVLL 126 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26106.7131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26106.7131.1 >prot_H-paniculata_contig26106.7131.1 ID=prot_H-paniculata_contig26106.7131.1|Name=mRNA_H-paniculata_contig26106.7131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp MMLYQRKLGADGNVEKYNCRLVAHGDHQIKGVLYEKGVITCAYRGQHENGback to top mRNA from alignment at H-paniculata_contig26106:1165..2243- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26106.7131.1 ID=mRNA_H-paniculata_contig26106.7131.1|Name=mRNA_H-paniculata_contig26106.7131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1079bp|location=Sequence derived from alignment at H-paniculata_contig26106:1165..2243- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26106:1165..2243- >mRNA_H-paniculata_contig26106.7131.1 ID=mRNA_H-paniculata_contig26106.7131.1|Name=mRNA_H-paniculata_contig26106.7131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1020bp|location=Sequence derived from alignment at H-paniculata_contig26106:1165..2243- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |