mRNA_H-paniculata_contig2610.7130.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2610.7130.1 vs. uniprot
Match: D7FYL3_ECTSI (MutS protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL3_ECTSI) HSP 1 Score: 847 bits (2189), Expect = 4.470e-292 Identity = 470/678 (69.32%), Postives = 511/678 (75.37%), Query Frame = 1
Query: 1 QAALTTYYGKATGQSASNGSEGSP-------ADVSVMALKQVLDLPRPAICALGPLIAHLERFGLDRALAAPDLSSFSKSQFMNLDAVTLRDLEV------------------------------------------------------------LECQADGREAGSLFSVLNRTHTAFGRRVLAGWIRQPLLSTEDIIARQDAIEELATDPPAVIERLRPALRDLKDLDPAIASLHHRRIQPSRLLSLLTTMRKVFAVFHP--AGIVTSTNDNGGQQAR----SAVLVEALAGVPATMASVVDRFLGELDTEAAASDDYVHALVDGESLCKELATAAEDEEAANAGLNKELQSVRETLRKPSLQWKTLRTGPTSTVEYLVELRKAEAAKVAPSSWMQVSQTKELVRFHTPEVLKLQQELLRARESRNIAARQAWGELTLQTDEACYQGFRLAVHALGTLDALLSLATVAKLPGYTRPVYRRPPSPNVGDADWVRGNHGDGRDSEHGGTEEEGGVITLRGARHPTVEQVLEGGFVPNDVNLRRGECLVVTGPNMGGKTSTVRMVALLCIMGQVGSCVPAESAELYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYILKHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDRSL 1815
QA+L+ YYGK G S + SEG D L +VLDLPRPAICALGPL+ HLERFGLDR+LA+PDLSSFSKSQ+M LDAVTLRDLEV L+CQADGREAGSLFS+L+RT TAFGRRVLAGW+RQPLLS EDI ARQDA+EEL TDPP+V+ERLRP LRDLKDLDPAIASLHHRRIQP+RLLSLL TMRKVF VFHP A T G Q R S VL++ALA VPA MA V+ R+LGEL+ EAAASDDYV ALVDGESLCKEL TAAE+EEAA A L ELQSVR LRKPSLQWKTLRTG TSTVEYLVELRK+EA K+ PS WMQVSQTK+L RFHTPEVL+LQQELLRARESRN+AARQAW EL Q DE CY GFR AV ALGTLDALLSLA VAKLPGY RP YR P + GD G G D E G +E I LRGARHPTVE+VLEGGFVPNDV+LRRGECLVVTGPNMGGK+STVRM AL+CI+GQ+GS V A+SA++YCLDGVYTRMGAGDDLAADMSTFMVELWHTSYI+K ATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRD+GCATLFVTHYPQVADLASD+SL
Sbjct: 701 QASLSKYYGKGRGSSKPDASEGEKDGNGXXGGDGCAPVLTRVLDLPRPAICALGPLMTHLERFGLDRSLASPDLSSFSKSQYMTLDAVTLRDLEVSTTVVLPRKDAIVFVAACCLVLSGVTSFSSLVPPGEVGGAEQKIGSWSTDSRAPEVIPSVLQCQADGREAGSLFSILDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEELVTDPPSVMERLRPTLRDLKDLDPAIASLHHRRIQPNRLLSLLGTMRKVFGVFHPPTARGADETEGAGPSQQRGGPRSVVLLDALADVPANMAPVIARYLGELNAEAAASDDYVRALVDGESLCKELKTAAEEEEAAKADLETELQSVRTILRKPSLQWKTLRTGATSTVEYLVELRKSEAKKLVPSGWMQVSQTKDLARFHTPEVLRLQQELLRARESRNLAARQAWAELVSQVDEECYAGFRTAVQALGTLDALLSLAVVAKLPGYVRPNYR-PTADAKGDESGGDG----GSDDEADGVDE----IVLRGARHPTVERVLEGGFVPNDVSLRRGECLVVTGPNMGGKSSTVRMAALICILGQMGSYVAADSADMYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYIIKQATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDIGCATLFVTHYPQVADLASDKSL 1369
BLAST of mRNA_H-paniculata_contig2610.7130.1 vs. uniprot
Match: A0A6H5K2F4_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F4_9PHAE) HSP 1 Score: 544 bits (1402), Expect = 1.850e-186 Identity = 316/524 (60.31%), Postives = 343/524 (65.46%), Query Frame = 1
Query: 262 VLECQADGREAGSLFSVLNRTHTAFGRRVLAGWIRQPLLSTEDIIARQDAIEELATDPPAVIERLRPALRDLKDLDPAIASLHHRRIQPSRLLSLLTTMRKVFAVFHPAGIVTSTNDNG------GQQARSAVLVEALAGVPATMASVVDRFLGELDTEAAASDDYVHALVDGESLCKELATAAEDEEAANAGLNKELQSVRETLRKPSLQWKTLRTGPTSTVEYLVELRKAEAAKVAPSSWMQVSQTKELVRFHTPEVLKLQQELLRARESRNIAARQAWGELTLQTDEACYQGFRLAVHALGTLDALLSLATVAKLPGYTRPVYRRPPSPNVGDADWVRGNHGDGRDSEHGGTEEEGGVITLRGARHPTVEQVLEGGFVPNDVNLRRGECLVVTGPNMGGKTSTVRMVALLCIMGQVGSCVPAESAELYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYILKHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDRSL 1815
VL+CQADGREAGSLFS+L+RT TAFGRRVLAGW+RQPLLS EDI ARQDA+EEL DPP+V+ERLRPALRDLKDLDPA ASLHHRRIQPSRLLSLL TMRKVF +FHP + + G G RSAVL++ALA VPA MA V+ R+LGEL+ EAAAS VR LRKPSLQWKTLRTG TSTVEYLVELRK+EA K+ PS WMQ AW EL Q DE CY GFR AV ALGTLDALLSLA VAKLPGY RP YR P + + GD D D G +E I LRGARHPTVE+VLEGGFVPNDV+LRRGECLVVTGPNMGGK+STVRM AL+CIMGQV ELWHTSYI+KHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRD+GCATLFVTHYPQVADLASD+SL
Sbjct: 2 VLQCQADGREAGSLFSILDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEELVADPPSVMERLRPALRDLKDLDPATASLHHRRIQPSRLLSLLGTMRKVFGIFHPPTVRGADKTEGAGSSQQGGGPRSAVLLDALADVPANMAPVIARYLGELNAEAAAS------------------------------------CVRTILRKPSLQWKTLRTGATSTVEYLVELRKSEAKKLVPSDWMQ-----------------------------------AWAELVSQVDEECYAGFRTAVQALGTLDALLSLAVVAKLPGYVRPKYR-PTASDKGDESXXXXXXXDEAD----GVDE----IVLRGARHPTVERVLEGGFVPNDVSLRRGECLVVTGPNMGGKSSTVRMAALICIMGQV------------------------------------ELWHTSYIIKHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDIGCATLFVTHYPQVADLASDKSL 409
BLAST of mRNA_H-paniculata_contig2610.7130.1 vs. uniprot
Match: A0A4D9D7G3_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7G3_9STRA) HSP 1 Score: 360 bits (924), Expect = 3.360e-109 Identity = 243/630 (38.57%), Postives = 336/630 (53.33%), Query Frame = 1
Query: 115 PRPAICALGPLIAHLERFGLDRALAA-PDLSSFSKSQF-MNLDAVTLRDLEV------LECQADG-------REAGSLFSVLNRTHTAFGRRVLAGWIRQPLLSTEDIIARQDAIEELATDPPAVIE----------------RLRPALRDLK---DLDPAIASLHHRRIQPSRLLSLLTTMRKVFAVFHPAGIVTSTNDNGGQQARSAVLVEALAGVP-ATMASVVDRFLGELDTEAAASDDYVHALVDGE---SLCKELATAAEDEEAANAGLNKELQSVRETLRKPSLQWKTLRTGPTSTVEYLVELRKAEAAKVAPSSWMQVSQTKELVRFHTPEVLKLQQELLRARESRNIAARQAWGELTLQTDEACYQGFRLAVHALGTLDALLSLATVAKLPGYTRPVYRRPPSPNVGDADWVRGNHGDGRDSEHGGTEEEGGVITLRGARHPTVEQVLEG---------------GFVPNDVNL-----RRGECLVVTGPNMGGKTSTVRMVALLCIMGQVGSCVPAESAELYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYILK-----------HATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADL 1797
P P + LGPL+ HL+ +G+ R L + P F + M LD VTLRDLE+ L Q G +E GSLF LN+T T++G R+L W+R+PL+ EDI R DA+EELA P +E R R K DL + +L + +I P RL LL T+ + P ++ + + +S++L L +P +++ V FL L +A +DD VH D +L ++LA ++ +A LN EL R L P+L ++TLRTG S++E L+EL K EA AP W+ V+QTK+LVRFHTP+VL+ LL ARE AW + DE C + V L TLD+LL+LA++A PG+ RP Y + E G E I++R ARHP ++ V G VPNDV+L G CLVVTGPNMGGK++ +R VAL ++GQ+GS +PA SA L L G+YTRMG+ DDLA +STFMVELW+ +IL+ R++LV+LDELGRGT+T+DG+AIA ATL+++ R +GC LFVTHYPQ+ ++
Sbjct: 204 PAPCLAVLGPLLLHLQEYGMSRLLLSRPSFQPFLRPALHMTLDGVTLRDLEIFSTPRGLSGQGGGEGGREGEQEEGSLFWFLNQTSTSYGSRLLREWVRKPLMRKEDIEGRLDAVEELAFALPPCLEEDGGLVAGFFRAKGGRRARGRAGGRKGFADLGTLVTALRYHKIVPRRLFLLLQTLECLLLALPPPPVLEA-------EVKSSLLRRLLLSLPTSSLLQDVRAFLSLLHLPSAQTDDKVHLFTDPAFHPALSRDLALL----QSLDAELNAELSVARRQLANPTLTFRTLRTGMNSSLECLIELPKKEAGH-APGDWLLVNQTKDLVRFHTPQVLRTLGRLLVAREETRQEGDAAWARYVKEVDERCGGKMQAVVEVLATLDSLLALASIASRPGWVRPTYVE-------------------AEDEDAGKNEGSLRISIRDARHPVLDHVFTSSSAPTSLSSSPGPASGVVPNDVDLGVGLESPGSCLVVTGPNMGGKSTYIRTVALCQLLGQLGSFLPATSASLPILAGIYTRMGSNDDLARGLSTFMVELWNAGFILRKVQATGKEGGCRGRRQNLVILDELGRGTATYDGMAIAEATLKYLARRVGCPVLFVTHYPQLGEV 802
BLAST of mRNA_H-paniculata_contig2610.7130.1 vs. uniprot
Match: A0A197JM36_9FUNG (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JM36_9FUNG) HSP 1 Score: 338 bits (867), Expect = 5.420e-101 Identity = 226/587 (38.50%), Postives = 321/587 (54.68%), Query Frame = 1
Query: 94 LKQVLDLPRPAICALGPLIAHLERFGLDRALAAPD-LSSFSKSQFMNLDAVTLRDLEVLECQADGREAGSLFSVLNRTHTAFGRRVLAGWIRQPLLSTEDIIARQDAIEELA--TDPPAVIERLRPALRDLKDLDPAIASLHHRRIQPSRLLSLLTTMRKVFAVFHPAGIVTSTNDNGGQQARSAVLVEALAGVPATMASVVDRFLGELDTEAAASDDYVHALVDGESLCKELATAAEDEEAANAGLNKELQSVRETLRKPSLQWKTLRTGPTSTVEYLVELRKAEAAKVAPSSWMQVSQTKELVRFHTPEVLKLQQELLRARESRNIAARQAWGELTLQTDEACYQGFRLAVHALGTLDALLSLATVAKLPGYTRPVYRRPPSPNVGDADWVRGNHGDGRDSEHGGTEEEGGVITLRGARHPTVEQVL--EGGFVPNDVNLRRGECL-------VVTGPNMGGKTSTVRMVALLCIMGQVGSCVPAESAELYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYILKHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDRSLG 1818
LK VL L + I AL +++HL FGL F+ M L+ T+ +LE+ Q DG GSLF++L+ T+T FGRR+L W+ +PL+ E + R DA+EE+ T ++ R L+ L D++ + +H+ + P L+++ T KV A+ P TN + G ++ ++ L G + FL L+ +AA +D + L+ + L + D L +EL +R+ LR+P L++ T+ S +EYLVE++ + AKV P +W+++S TK++ RFHTPEV++L + +E +A +A+ + E Y+ FR V L LD L SLA VA LPGY +P Y V DA I ++ RHP VEQ+L G FV ND+ L L ++TGPNMGGK+ +R VALLCIM Q+GS +PA+SA + LD VYTRMGA D++ STFMVEL TS ILK AT RSLV+LDELGRGTST DGVAIA A L+HVV+++ TLFVTHYP +AD+A + G
Sbjct: 320 LKTVLGLSKELIVALSAILSHLTAFGLASIFRLSKYFECFTSRSHMLLNGNTIANLELYRNQTDGTSKGSLFAILDHTNTGFGRRLLKKWVGKPLVDKEALQERVDAVEEILALTGKNVYLDNARAVLKGLMDMEKGVCRIHYGKSSPKEFLAIVQTFMKVSAIL-PEEKRCRTNADFGL---TSPMLNRLIGSLSNALEDSQYFLEGLNKSSAAKNDKL--LMFQDELIADKWPEILDIVTTEDDLKEELARIRKLLREPKLEFATV-----SAIEYLVEVKNKDTAKV-PKNWVKISGTKQVSRFHTPEVIQLMASKAQNQERLAMACERAFASFQHEFSER-YEVFRDLVQNLAVLDCLFSLAVVACLPGYVKPQY-------VDDAAVATT------------------TIDIKNGRHPMVEQLLLSSGSFVANDIQLGTNPALGTDEKTIILTGPNMGGKSCYIRTVALLCIMAQIGSYLPADSARVSMLDAVYTRMGASDNIFGHESTFMVELQETSDILKMATERSLVILDELGRGTSTLDGVAIAYAVLKHVVKNIRAVTLFVTHYPSLADVAREFPQG 868
BLAST of mRNA_H-paniculata_contig2610.7130.1 vs. uniprot
Match: A0A0L0H3Q5_SPIPD (DNA mismatch repair protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H3Q5_SPIPD) HSP 1 Score: 337 bits (863), Expect = 2.330e-99 Identity = 224/574 (39.02%), Postives = 318/574 (55.40%), Query Frame = 1
Query: 100 QVLDLPRPAICALGPLIAHLERFGLDRALAAPDL-SSFSKSQFMNLDAVTLRDLEVLECQADGREAGSLFSVLNRTHTAFGRRVLAGWIRQPLLSTEDIIARQDAIEELATDPP---AVIERLRPALRDLKDLDPAIASLHHRRIQPSRLLSLLTTMRKVFAVFHPAGIVTSTNDNGGQQARSAVLVEALAGVPATMASVVDRFLGELDTEAAASDDYVHALVDGESLCKELATAAEDEEAANAGLNKELQSVRETLRKPSLQWKTLRTGPTSTVEYLVELRKAEAAKVAPSSWMQVSQTKELVRFHTPEVLKLQQELLRARESRNIAARQAWGELTLQTDEACYQGFRLAVHALGTLDALLSLATVAKLPGYTRPVYRRPPSPNVGDADWVRGNHGDGRDSEHGGTEEEGGVITLRGARHPTVEQVLEGGFVPNDVNLRRGE-CLVVTGPNMGGKTSTVRMVALLCIMGQVGSCVPAESAELYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYILKHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASD 1806
Q L LPR I L L+ +L +FGL+ L ++F+ M L+A TL LE+ Q D E GSL +L+ T T FG+R+L WI +PL+ D+ R DA+EE+ I+R+R + L DL+ ++ +H+ R PS L + L K+ + F + ++ RS +L + +PA + V+ F G ++ AA SDD + D S E+ E+ E L L+ VR ++KP+L + T+ + +EYL+E+ +A+KV PS+W+++S TK + RFHTP V++ +E R RE A A+ + Y+ FR V ++ T+D LLSLATVA PGY +P + V DA + ++ RHP VE V+ +V NDV+L + CL++TGPNMGGK+S +R VAL+ IMGQ+GS VPA+SA+L D V+TRMGA DDLA STFM EL TS I++ AT RSLV+LDELGRGTSTHDG AIA ATL++ + DL TLFVTHYP + L +
Sbjct: 511 QALSLPRRVIICLAALLKYLVQFGLEDILRLTKFFTAFASVAHMVLNANTLNSLEIFRNQTDFEEKGSLLWILDHTKTKFGQRLLKKWIGRPLVQLPDLQKRIDAVEEIIQGDAQGNVFIQRMRGLICQLPDLEKSVCRIHYGRCSPSELNNTLLAFEKIGSSFI---------SDAWEKFRSPILKDIYKSLPAIKSDVM-YFRGMINESAAKSDDKIEFFSDT-SKWPEIGEFKENLETVEEELLAHLKEVRGEIKKPNLTYVTV-----AGIEYLIEVPVNQASKV-PSNWIKISNTKAVARFHTPFVIEKIKERDRYREQLVAACDTAYAAFVREVGSR-YELFRGVVQSIATMDCLLSLATVAAQPGYCKPEF-------VPDA-----------------------TVLVKEGRHPMVENVVSS-YVTNDVDLTQDRRCLLITGPNMGGKSSYIRQVALIVIMGQIGSYVPAKSAQLGIFDSVHTRMGASDDLAGGQSTFMKELQETSDIMRTATNRSLVILDELGRGTSTHDGTAIAFATLKYFIEDLKSITLFVTHYPVLGQLEKE 1035
BLAST of mRNA_H-paniculata_contig2610.7130.1 vs. uniprot
Match: A0A0C3HNK6_9PEZI (DNA mismatch repair protein n=1 Tax=Oidiodendron maius Zn TaxID=913774 RepID=A0A0C3HNK6_9PEZI) HSP 1 Score: 335 bits (859), Expect = 7.710e-99 Identity = 227/584 (38.87%), Postives = 323/584 (55.31%), Query Frame = 1
Query: 94 LKQVLDLPRPAICALGPLIAHLERFGLDRALAAPD-LSSFSKSQFMNLDAVTLRDLEVLECQADGREAGSLFSVLNRTHTAFGRRVLAGWIRQPLLSTEDIIARQDAIEELATD-PPAVIERLRPALRDLK-DLDPAIASLHHRRIQPSRLLSLLTTMRKVFAVFHPAGIVTSTNDNGGQQARSAVLVEALAGVPATMASVVDRFLGELDTEAAASDD-YVHALVDGESLCKELATAAEDEEAANAGLNKELQSVR-----ETLRKPSLQWKTLRTGPTSTVEYLVELRKAEAAKVAPSSWMQVSQTKELVRFHTPEVLKLQQELLRARESRNIAARQAWGELTLQTDEACYQGFRLAVHALGTLDALLSLATVAKLPGYTRPVYRRPPSPNVGDADWVRGNHGDGRDSEHGGTEEEGGVITLRGARHPTVEQVLEGGFVPNDVNLR------RGECLVVTGPNMGGKTSTVRMVALLCIMGQVGSCVPAESAELYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYILKHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLA 1800
L +VL L P L +I HL +GL+ SFS M L+ TL LE+ Q D E GSLF L++T T FG+R+L W+ +PLLS E + R +A+EEL +++LR LR++K DL+ ++ +++ + LL++L TM+ + A G S ++ EA+A +P T+ V FL +++ EAA +DD Y D E+ A + + A + +L + R + +K + + T+ S +EYL+E+ + V P+SW ++S TK+L RFHTP+V+++ +E + +ES + A A+ L+ A Y FR A+ +L TLD LLSL+TVA PGYT+P + P+ I + RHP VE++L G++PN L RG+ ++TGPNMGGK+S VR VAL+CI+ Q+GS VPA SA L LDGVYTRMGA D L + STFMVEL T+ I+K AT RSLV+LDELGRGTSTHDGVAIA + L HV+RD+GC LFVTHY +A +A
Sbjct: 492 LDKVLALSEPVTICLSAMITHLTEYGLEHVFDLTKYFQSFSARSHMVLNGNTLTSLEIYHNQTDYSENGSLFWTLDKTRTRFGQRLLRKWVGRPLLSKERLEERLNAVEELLEGYQTPKVDKLRALLRNIKSDLERSLIRIYYGKCSRPELLTVLQTMQMI------ANEYAYVKSPSGADFNSTLINEAVATLP-TIGEAVTSFLDKINAEAARADDKYAFFREDEET------EAITEHKLGIASVEHDLDTHRLEAASKLGKKAPVTYMTV-----SGIEYLIEVPNIDLKHV-PASWTKISGTKKLSRFHTPDVIRMLRERDQHKESLSAACDSAFSSF-LKDISANYASFRDAISSLSTLDCLLSLSTVASFPGYTKPSFSESPTAE----------------------------IRITDGRHPMVEKLLSTGYIPNSTTLSTTPGSTRGQ--LITGPNMGGKSSYVRQVALICILAQIGSYVPATSAILGLLDGVYTRMGAHDSLFTNQSTFMVELSETAQIMKRATPRSLVILDELGRGTSTHDGVAIAQSVLEHVIRDVGCLCLFVTHYQSLAAVA 1025
BLAST of mRNA_H-paniculata_contig2610.7130.1 vs. uniprot
Match: A0A8H7Q3L1_9FUNG (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q3L1_9FUNG) HSP 1 Score: 333 bits (854), Expect = 7.870e-99 Identity = 226/605 (37.36%), Postives = 329/605 (54.38%), Query Frame = 1
Query: 10 LTTYYGKATGQSASNGSEGSPADVSVMALKQVLDLPRPAICALGPLIAHLERFGLDRALAAPD-LSSFSKSQFMNLDAVTLRDLEVLECQADGREAGSLFSVLNRTHTAFGRRVLAGWIRQPLLSTEDIIARQDAIEEL-ATDPPAVIERLRPALRDLKDLDPAIASLHHRRIQPSRLLSLLTTMRKVFAVFHPAGIVTSTNDNGGQQARSAVLVEALAGVPATMASVVDRFLGELDTEAAASDDYVHALVDGESLCKELATAAEDEEAANAGLNKELQSVRETLRKPSLQWKTLRTGPTSTVEYLVELRKAEAAKVAPSSWMQVSQTKELVRFHTPEVLKLQQELLRARESRNIAARQAWGELTLQTDEACYQGFRLAVHALGTLDALLSLATVAKLPGYTRPVYRRPPSPNVGDADWVRGNHGDGRDSEHGGTEEEGGVITLRGARHPTVEQVLEGGFVPNDVNLRR--GECLVVTGPNMGGKTSTVRMVALLCIMGQVGSCVPAESAELYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYILKHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDRS 1812
++ +Y ATG +S S+G ++ A ++L LP I +L + +L F LD + FS M L+A T+ +LE+ + E SLF +LN T+T+FG+R+L W+ +PL++ + R +A+EEL +TD P V ++R L+ L DL+ + +H+ + PS LL +L + KV +FH A V S++L +P + V+ LD A + V L + +E++ + L +R+ LR + Q+ T+ + +EYLVE++ E KV P +W+++S TK + RFHTP ++ +E + R+ IA+++A+ + Q E Y+ FR V L LD LLSLATVA PGY +P Y D + ++ + RHP VEQ+L GGFVPNDV +V+TGPNMGGK+S +R VAL+ IMGQ+GS VPA+SA L LD VYTRMGA D+L STFM+EL TS I+K AT RSLV+LDELGRGTSTHDGVAIA A L+H + + T+FVTHYP +A+L ++ S
Sbjct: 371 VSDFYANATGSQSS--SQGDVKSETLFA--EILRLPEVIIKSLALTVKYLTDFQLDHVFKLTKYFNHFSSKSHMTLNANTMANLEIYRNSTNYGEKHSLFWILNHTNTSFGKRLLKRWVGRPLINKGLLEERTNAVEELISTDNPKV-PKIRSLLKHLPDLEKGLCRIHYGKSSPSELLQVLNALEKVAELFHQAAPVADIKFG------SSLLNTIFDCLPLILEEVI-TLKSMLDVTAVERGNDVTNLFQSDEPWQEISEYKLKINDTEQEFQEYLTELRKILRNSTTQYVTV-----AGIEYLVEVKNTELKKV-PQNWIKISGTKAVSRFHTPFIIAKAKEKEQYRDRLKIASQKAYQDYLHQVSER-YELFRDVVQRLAQLDCLLSLATVAIQPGYCKPEY----------VDHL--------------------IMKVENGRHPMVEQLLSGGFVPNDVEFDSDASRTMVLTGPNMGGKSSYIRQVALIAIMGQIGSYVPADSARLGILDAVYTRMGALDNLQTGESTFMIELHETSDIMKQATARSLVILDELGRGTSTHDGVAIAYAVLQHFIAKIQSITIFVTHYPSLAELVNEHS 926
BLAST of mRNA_H-paniculata_contig2610.7130.1 vs. uniprot
Match: A0A0F8U5P0_9EURO (DNA mismatch repair protein MSH3 (Fragment) n=1 Tax=Aspergillus ochraceoroseus TaxID=138278 RepID=A0A0F8U5P0_9EURO) HSP 1 Score: 328 bits (841), Expect = 2.610e-98 Identity = 229/583 (39.28%), Postives = 332/583 (56.95%), Query Frame = 1
Query: 76 DVSVMALKQVLDLPRPAICALGPLIAHLERFGLDRALAAPD-LSSFSKSQFMNLDAVTLRDLEVLECQADGREAGSLFSVLNRTHTAFGRRVLAGWIRQPLLSTEDIIARQDAIEELA-TDPPAVIERLRPALRDLK-DLDPAIASLHHRRIQPSRLLSLLTTMRKVFAVFHPAGIVTSTNDNGGQQARSAVLVEALAGVPATMASVVDRFLGELDTEAAASDDYVHALVDGESLCKELATAAEDEEAANAGLNKELQSVRETLRKPSLQWKTLRTGPTSTVEYLVELRK-AEAAKVAPSSWMQVSQTKELVRFHTPEVLKLQQELLRARESRNIAARQAWGELTLQTDEAC-YQGFRLAVHALGTLDALLSLATVAKLPGYTRPVYRRPPSPNVGDADWVRGNHGDGRDSEHGGTEEEGGVITLRGARHPTVEQVLEGGFVPNDVNLRRGE--CLVVTGPNMGGKTSTVRMVALLCIMGQVGSCVPAESAELYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYILKHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLAS 1803
+V+ L++VL+LP L +I H+ +GL+ L FS M L+ TL LE+ + Q D GSLF L+RT T FG+R+L W+ +PLL + R +A+EEL D +ER++ L +K DL+ + +++ + LL++L TM+ + F V + D G S + +A+A +PA M VV FL +++ AA SDD D E +E++ +++ A + EL+ R +L KT+ + ++YL+E+ + + K P+SW++VS TK++ RFHTPEV+K+ ++ + +E+ A +A+ L LQ + A YQ R V +L TLD L+SLAT+A+ PGY +P Y TEE I ++ RHP VEQ+L +VPND++L + L+VTGPNMGGK+S VR VAL+ IMGQ+GS VPA+SA+L LD V+TRMGA D++ A STFMVEL T+ ILK AT RSLV+LDELGRGTSTHDGVAIA A L ++VR + TLF+THY +A + S
Sbjct: 217 EVASSLLQKVLNLPDQVTICLSAMIRHMTEYGLEHVLELTKYFQHFSSRSHMLLNGNTLTSLEIYQNQTDYSSKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKHQLEERVNAVEELNHPDNTTSVERVKALLARVKHDLEKGLIRIYYGKCTRPELLTMLQTMQMIAQEFVD---VKAPEDTGFS---SRAISQAMASLPAIMDDVV-FFLNKINMHAAKSDDKYAFFRDAEET-EEIS----EQKLGIAAVEHELEEHRSEAGD-ALTKKTVNYVSVAGIDYLIEVENNSPSIKRVPASWVKVSGTKKVSRFHTPEVIKMIRQRDQHKEALAAACDKAF--LALQAEIATNYQNLRDCVQSLATLDCLISLATIARQPGYVKPEY----------------------------TEET--RIHVQQGRHPMVEQLLLDSYVPNDIDLDSDQTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRSIRSLTLFITHYQHLASMVS 754
BLAST of mRNA_H-paniculata_contig2610.7130.1 vs. uniprot
Match: A0A1Y2H2K5_9FUNG (DNA mismatch repair protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H2K5_9FUNG) HSP 1 Score: 335 bits (859), Expect = 2.920e-98 Identity = 232/602 (38.54%), Postives = 325/602 (53.99%), Query Frame = 1
Query: 94 LKQVLDLPRPAICALGPLIAHLERFGLDRALAAPD-LSSFSKSQFMNLDAVTLRDLEVLECQADGREAGSLFSVLNRTHTAFGRRVLAGWIRQPLLSTEDIIARQDAIEEL--ATDPPAVIERLRPALRDLKDLDPAIASLHHRRIQPSRLLSLLTTMRKVFAVFHPAGIVTSTNDNGGQQARSAVLVEALAGVPATMASVVDRFLGELDTEAAASDDYVHALVDGESLCKELATAAEDEE---AANAGLNKELQSVRETLRKPSLQWKTLRTGPTSTVEYLVELRKAEAAKVAPSSWMQVSQTKELVRFHTPEVLKLQQELLRARESRNIAARQAWGELTLQTDEACYQGFRLAVHALGTLDALLSLATVAKLPGYTRPVY---RRPPSPNVGDADWVRGNHGDGRDSEHGGTEE----------EGGVITLRGARHPTVEQVLE-GGFVPNDVNLRRG-------ECLVVTGPNMGGKTSTVRMVALLCIMGQVGSCVPAESAELYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYILKHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDRSLG 1818
LK VL LPR I AL +I HL FGL F+ M L+ T+ +LE+ Q D GSLF++++ T+T FGRR+L WI +PL + E + R DA+EE+ + +E + L+ L DL+ + +H+ + P L+++ T KV V P+ S D ++ ++ L G A A FL L+ EAA +D + D E + ++ E L L ++R+ LR+P L++ + S ++YLVE++ + AKV P SW+++S TK++ RFHTPE ++L QE + +E + QA+ + E Y+ FR V L LD L SLA VA LPGY +P Y P DA D G T + I ++ RHP VEQ+L G FVPND++ R + +++TGPNMGGK+ +R VALLCIM Q+GS +PA+SA + LD V+TRMGA D++ STFMVEL TS ILK AT RSLV+LDELGRGTST DGVAIA A L+HVV +G TLFVTHYP +AD+A++ + G
Sbjct: 507 LKTVLGLPRNLIIALSAMITHLAEFGLAPVFRLSKYFECFTSRSHMLLNGNTIANLEIYRNQTDWSTRGSLFAIMDHTYTGFGRRLLKKWIGKPLTNREPLQERVDAVEEILASAGKNPYLEDAKIMLKGLMDLEKGVCRIHYGKSSPKEFLAIIQTFMKVAEVIPPSQRSKSPADFN----LTSPMLRNLIGSLANAAEDSQYFLNALNVEAARKNDKLLMFQD-EVIAEKWPDIQEHRNNIVTTEGDLAIHLNTIRKQLREPKLEFTSC-----SGIDYLVEVKNKDVAKV-PKSWVKISGTKQVSRFHTPETIQLIQEKAQHQERLILTCDQAFMAFQQEFSER-YEVFRDLVQNLAILDCLFSLAVVACLPGYVKPEYVDDSLPDDAQDNDAHSSPQRMDVDTDDFTGSTLDLQLQSPKRRATKATIDIKNGRHPMVEQMLPFGTFVPNDIHFGRNPSSGVDQKAMILTGPNMGGKSCYIRQVALLCIMAQIGSYLPADSARVSLLDAVFTRMGASDNIFGHESTFMVELQETSDILKMATPRSLVILDELGRGTSTLDGVAIAYAVLKHVVSHVGSITLFVTHYPSLADVATEFAEG 1096
BLAST of mRNA_H-paniculata_contig2610.7130.1 vs. uniprot
Match: F2RVP4_TRIT1 (DNA mismatch repair protein MSH3 n=11 Tax=Arthrodermataceae TaxID=34384 RepID=F2RVP4_TRIT1) HSP 1 Score: 332 bits (850), Expect = 3.260e-98 Identity = 233/587 (39.69%), Postives = 324/587 (55.20%), Query Frame = 1
Query: 64 GSPADVSVM-ALKQVLDLPRPAICALGPLIAHLERFGLDRALAAPD-LSSFSKSQFMNLDAVTLRDLEVLECQADGREAGSLFSVLNRTHTAFGRRVLAGWIRQPLLSTEDIIARQDAIEELA-TDPPAVIERLRPALRDLK-DLDPAIASLHHRRIQPSRLLSLLTTMRKVFAVFHPAGIVTSTNDNGGQQARSAVLVEALAGVPATMASVVDRFLGELDTEAAASDDYVHALVDGESLCKELATAAEDEEAANAGLNKELQSVRETLRKPSLQWKTLRTGPTSTVEYLVELRKAEAA-KVAPSSWMQVSQTKELVRFHTPEVLKLQQELLRARESRNIAARQAWGELTLQTDEACYQGFRLAVHALGTLDALLSLATVAKLPGYTRPVYRRPPSPNVGDADWVRGNHGDGRDSEHGGTEEEGGVITLRGARHPTVEQVLEGGFVPNDVNLRRGE--CLVVTGPNMGGKTSTVRMVALLCIMGQVGSCVPAESAELYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYILKHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLAS 1803
GSP D L QVL LP L +I HL +GL+ SFS M L+ TL +LE+ + Q D GSLF +NRT T FG+R+L W+ +PLL + R +A+ EL +D + L L ++ DL+ A+ +++ + LL++L +M+ + F V S D+G +S +L E++A +P TM V +L +++ AA DD + E +E+ L L+S+ ETL K +Q+ ++ + ++YLVE+ ++ A K P+SW ++S TK++ RFHTPEV+K+ +E + +ES A A+ +L L YQ FR + AL T+DAL SL+ +A PGY +P Y + VI + RHP VE+VL +VPND L E L+VTGPNMGGK+S VR +AL+CIMGQ+GS VPAESA L LD VYTRMGA D++ A STFMVEL T+ ILK AT RSLV+LDELGRGTSTHDGVAIA A L ++VR+L TLF+THY ++ LAS
Sbjct: 391 GSPEDAKASNLLDQVLKLPDDVTVCLSAMIKHLTEYGLEHVFDLTKYFQSFSARSHMLLNGNTLTNLEIYQNQTDYSSKGSLFWSMNRTRTKFGQRLLRRWVGRPLLEKAKLEERTEAVTELLDSDKSTLTYNLGSTLSQVRVDLEKALIRVYYGKCSRPELLTMLKSMQSIAVSF---AHVKSPADSGF---KSPILSESIAILP-TMHDDVVSYLNKINETAAKKDDKYDFFRESEES-EEIGEHRLMIGTIEYELKDHLKSIAETLGKKKVQYVSV-----AGIDYLVEVENSQGALKKVPASWRKISGTKKVSRFHTPEVVKMMRERDQQKESLAAACDAAFLKL-LSDISTKYQLFRDCIQALATIDALHSLSVIAAQPGYVKPKYT------------------------------DDTVINISQGRHPMVEKVLIDSYVPNDTQLSTDETRALLVTGPNMGGKSSYVRQIALICIMGQIGSYVPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSRLAS 933 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2610.7130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2610.7130.1 >prot_H-paniculata_contig2610.7130.1 ID=prot_H-paniculata_contig2610.7130.1|Name=mRNA_H-paniculata_contig2610.7130.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=607bp QAALTTYYGKATGQSASNGSEGSPADVSVMALKQVLDLPRPAICALGPLIback to top mRNA from alignment at H-paniculata_contig2610:480..19647+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2610.7130.1 ID=mRNA_H-paniculata_contig2610.7130.1|Name=mRNA_H-paniculata_contig2610.7130.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=19168bp|location=Sequence derived from alignment at H-paniculata_contig2610:480..19647+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2610:480..19647+ >mRNA_H-paniculata_contig2610.7130.1 ID=mRNA_H-paniculata_contig2610.7130.1|Name=mRNA_H-paniculata_contig2610.7130.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3642bp|location=Sequence derived from alignment at H-paniculata_contig2610:480..19647+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |