prot_H-paniculata_contig2607.7120.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2607.7120.1
Unique Nameprot_H-paniculata_contig2607.7120.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length290
Homology
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BLAST of mRNA_H-paniculata_contig2607.7120.1 vs. uniprot
Match: A0A6H5L6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N4_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.000e-46
Identity = 145/286 (50.70%), Postives = 167/286 (58.39%), Query Frame = 0 
Query:    1 MQSTNEVHVDLVRLLAAAERLLLTGEPSAEDGRWEHWPRFCQFLNTLAGLQASCQARLLEPRSHPNTPSVSSSPSTMPILPTPEDLAGLDRRIEILRRKRDDLVADKIAAAHAXXXXXXXXXXXXXXXTVDSASNESRAYDDGIQGEVQEERSPRTRSSPSKRTGLSRRSNPSGGYDNPAGDELWRGRREEAAGRRGDEQEADTAQAEE-----VTQEIASMAGRLKESSMAINTTLRTQTRILEDTGDAAAQNVDNVKRENARVAERLRKKRAAMFASWCMMLTV 281
            MQS +E+HVDLVRLL+A ERL+  GEPSA DG WEHWPRFCQF+  L   Q+  QA++ E        S  +     P  P  EDLA  DRR+EILRRKRDDL          XXXXXXXXXXXXXXX                      +R  R R +     G SR  N      + +G  ++ GRR                         V QEI+SMAGRLKESS+AIN TLRTQT++LEDTGDAA QNV  VKRENARV+ERLRKKRAAMFASWCMM+TV
Sbjct:    1 MQSAHEIHVDLVRLLSATERLVAAGEPSA-DGSWEHWPRFCQFITWLDSTQSQLQAKVAEV-------SRGAGAGLSPASPAAEDLADYDRRLEILRRKRDDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAIFTPREDGDRVVRRREA----RGSSRGRNTKDSSQDDSGG-VFGGRRRXXXXXXXXXXXXXXXXXXXXXXXXVAQEISSMAGRLKESSVAINQTLRTQTQVLEDTGDAAIQNVGRVKRENARVSERLRKKRAAMFASWCMMITV 273
[Close]
BLAST of mRNA_H-paniculata_contig2607.7120.1 vs. uniprot
Match: D7FHQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ2_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 2.520e-44
Identity = 137/281 (48.75%), Postives = 159/281 (56.58%), Query Frame = 0 
Query:    1 MQSTNEVHVDLVRLLAAAERLLLTGEPSAEDGRWEHWPRFCQFLNTLAGLQASCQARLLEPRSHPNTPSVSSSPSTMPILPTPEDLAGLDRRIEILRRKRDDLVADKIAAAHAXXXXXXXXXXXXXXXTVDSASNESRAYDDGIQGEVQEERSPRTRSSPSKRTGLSRRSNPSGGYDNPAGDELWRGRREEAAGRRGDEQEADTAQAEEVTQEIASMAGRLKESSMAINTTLRTQTRILEDTGDAAAQNVDNVKRENARVAERLRKKRAAMFASWCMMLTV 281
            M S +E+HV+LVRLL+A ERL+  GEPSA  G WE+WPRFCQF+ +L   Q+  QAR+ E        S  +     P LPT EDLA  DRR+EILRRKRD            XXXXXXXXXXXXXXX                                                                      E+ AD A+A++V QEI+SMAGRLKESS+AIN TLRTQT++LEDTGDAA QNVD VKRENARV+ERLRKKRAAMFASWCMM+TV
Sbjct:    1 MPSVHEIHVELVRLLSATERLVAAGEPSA-SGSWENWPRFCQFITSLDSTQSQLQARVAEV-------SRGAGAGLSPALPTAEDLADYDRRLEILRRKRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXERAADEAEADQVAQEISSMAGRLKESSVAINQTLRTQTQVLEDTGDAATQNVDRVKRENARVSERLRKKRAAMFASWCMMITV 267
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2607.7120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6N4_9PHAE1.000e-4650.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHQ2_ECTSI2.520e-4448.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 250..270
NoneNo IPR availableCOILSCoilCoilcoord: 86..106
NoneNo IPR availableGENE3D1.20.5.110coord: 188..266
e-value: 9.3E-6
score: 27.5
NoneNo IPR availablePANTHERPTHR13050:SF7VESICLE TRANSPORT PROTEIN USE1coord: 69..281
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 200..260
IPR019150Vesicle transport protein, Use1PFAMPF09753Use1coord: 9..281
e-value: 1.9E-12
score: 47.5
IPR019150Vesicle transport protein, Use1PANTHERPTHR13050USE1-LIKE PROTEINcoord: 69..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2607contigH-paniculata_contig2607:12993..20622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2607.7120.1mRNA_H-paniculata_contig2607.7120.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2607 12993..20622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2607.7120.1 ID=prot_H-paniculata_contig2607.7120.1|Name=mRNA_H-paniculata_contig2607.7120.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp
MQSTNEVHVDLVRLLAAAERLLLTGEPSAEDGRWEHWPRFCQFLNTLAGL
QASCQARLLEPRSHPNTPSVSSSPSTMPILPTPEDLAGLDRRIEILRRKR
DDLVADKIAAAHAAAIEKAAAAAAAESTTVDSASNESRAYDDGIQGEVQE
ERSPRTRSSPSKRTGLSRRSNPSGGYDNPAGDELWRGRREEAAGRRGDEQ
EADTAQAEEVTQEIASMAGRLKESSMAINTTLRTQTRILEDTGDAAAQNV
DNVKRENARVAERLRKKRAAMFASWCMMLTVGNVEDRGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019150Vesicle_transport_protein_Use1