prot_H-paniculata_contig26050.7114.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26050.7114.1
Unique Nameprot_H-paniculata_contig26050.7114.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length244
Homology
BLAST of mRNA_H-paniculata_contig26050.7114.1 vs. uniprot
Match: UPI001F004464 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F004464)

HSP 1 Score: 183 bits (464), Expect = 2.960e-49
Identity = 94/226 (41.59%), Postives = 141/226 (62.39%), Query Frame = 0
Query:   20 LELVHTDIAGPVDKSFEGRG-FAIVFVDDYSRMNKVYVLRHKSEALWALKQFERDIAKNNGLQIKHLPSDQGGTFTEEAFRPFDAENCIKQEFSAAYTPQPNDVAERNWRSIFEMTRSKMITANMGRRYWAEAAHATMYCLNRTPTRPHNGGTQYETRHGMTQKLDNLRVFSCTAYVMFQSQQRRKLDDEARAEMFLGYDEDSLSYRIYYPENKSVQLSRDVRFDE 244
            LEL+HTDI GP+  S  G+  + ++F+DD+SR   VY L+ KSEA    K+F+  + K +GL IK + SD+GG FT   F+ F  ++ I++  +   +PQ N VAER  R+I +M RS + + N+ + +WAEA    +Y LNR+PTR   G T  E+  G    + +LRVF   AY     + R KLDD+++A +F+GYD +S  Y++Y P+  ++ +SRDV FDE
Sbjct:  175 LELIHTDICGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEAFEVFKKFKAAVEKESGLHIKAMRSDRGGEFTSREFQNFCEKHGIRRPLTVPRSPQQNGVAERKNRTILDMARSMLKSKNLPKEFWAEAVACAVYLLNRSPTRSVWGKTPQESWSGRKPGISHLRVFGSKAYAHVPDETRSKLDDKSKAFIFIGYDSNSKGYKLYNPDTNNLVISRDVEFDE 400          
BLAST of mRNA_H-paniculata_contig26050.7114.1 vs. uniprot
Match: A0A2H9ZU53_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZU53_9ASPA)

HSP 1 Score: 177 bits (449), Expect = 3.390e-49
Identity = 95/231 (41.13%), Postives = 142/231 (61.47%), Query Frame = 0
Query:   15 QTTERLELVHTDIAGPVD-KSFEGRGFAIVFVDDYSRMNKVYVLRHKSEALWALKQFERDIAKNNGLQIKHLPSDQGGTFTEEAFRPFDAENCIKQEFSAAYTPQPNDVAERNWRSIFEMTRSKMITANMGRRYWAEAAHATMYCLNRTPTRPHNGGTQYETRHGMTQKLDNLRVFSCTAYVMFQSQQRRKLDDEARAEMFLGYDEDSLSYRIYYPENKSVQLSRDVRFDE 244
            + T  LELV++D+ GP+  +S  G  + I+F+DDY+RMN VY L++KSEAL A K F+  + + +G  IK L +D+GG F    F+ F  EN I +E +A YTP+ N VAER  R+I EM RS +    +  ++WAE+    +Y LN +PT+     T YE   G   ++ +L++F C AYV   S  R KL+D++   +F+GY   S +YR+Y P +K + +SR V F+E
Sbjct:  179 RATHPLELVYSDLCGPMRIESLSGSRYFILFIDDYTRMNWVYFLKNKSEALEAFKIFKAFVERQSGYFIKVLRTDRGGEFLSHEFKAFCEENGIHRELTAPYTPEQNGVAERKNRTIVEMARSLLKAKGIPNQFWAESVATAVYLLNISPTKAILNRTLYEVWKGRKSRISHLKIFGCIAYVYVNSHDRHKLEDKSEKCIFIGYCPQSKAYRLYNPCSKKLIISRSVIFEE 409          
BLAST of mRNA_H-paniculata_contig26050.7114.1 vs. uniprot
Match: A0A2Z6P4L8_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P4L8_TRISU)

HSP 1 Score: 183 bits (464), Expect = 3.690e-49
Identity = 97/231 (41.99%), Postives = 138/231 (59.74%), Query Frame = 0
Query:   15 QTTERLELVHTDIAGPVDKSFEG-RGFAIVFVDDYSRMNKVYVLRHKSEALWALKQFERDIAKNNGLQIKHLPSDQGGTFTEEAFRPFDAENCIKQEFSAAYTPQPNDVAERNWRSIFEMTRSKMITANMGRRYWAEAAHATMYCLNRTPTRPHNGGTQYETRHGMTQKLDNLRVFSCTAYVMFQSQQRRKLDDEARAEMFLGYDEDSLSYRIYYPENKSVQLSRDVRFDE 244
            + +E+LELVH DI GP+    EG + + I F+DDYSR   VY L +KS+A    K F+  + K  GL IK L +D+GG FT   F+ +   N IK++ + AYTPQ N VAER  R++  M RS ++  N+ R++W EA +   Y LNR PT      T  E  +GM   + +LRVF C AY      +R KL+D++R  +  G  E+S +YR+Y P +K + +SRDV F+E
Sbjct:  487 RASEKLELVHADICGPISPFSEGNKRYFICFIDDYSRKAWVYFLAYKSDAFTTFKLFKALVEKETGLSIKCLRTDRGGEFTSNEFKEYCKMNGIKRQLTVAYTPQQNGVAERKNRTVMNMVRSLLVEKNVPRKFWVEAVNWAFYVLNRCPTSSVKEMTPVEAWYGMKPSVGHLRVFGCIAYAHVPDARRTKLEDKSRCCVLFGVSEESKAYRLYDPTSKRIIISRDVVFEE 717          
BLAST of mRNA_H-paniculata_contig26050.7114.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 180 bits (457), Expect = 3.020e-48
Identity = 92/245 (37.55%), Postives = 142/245 (57.96%), Query Frame = 0
Query:    1 GEASKQPVKKYWEEQTTERLELVHTDIAGPVDK-SFEGRGFAIVFVDDYSRMNKVYVLRHKSEALWALKQFERDIAKNNGLQIKHLPSDQGGTFTEEAFRPFDAENCIKQEFSAAYTPQPNDVAERNWRSIFEMTRSKMITANMGRRYWAEAAHATMYCLNRTPTRPHNGGTQYETRHGMTQKLDNLRVFSCTAYVMFQSQQRRKLDDEARAEMFLGYDEDSLSYRIYYPENKSVQLSRDVRFDE 244
            G+  K P  K    + TE+L+LVHTD+ GP+   S  G  + ++F+DDY+RM+ V+ L+ KS+      +F+  +    GLQ+K L SD G  +T   F+ F  +  I+ + +  YTPQ N V+ER  R++ EM R  +    + + +WAEA + ++Y LN  PT+   G T +E  HG T  +++L+VF C  Y +    +R KLD ++   +FLGY   S  YRIY P  K + +SR+V+FDE
Sbjct:  436 GKQRKLPFPKEASWRATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDDYTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDE 680          
BLAST of mRNA_H-paniculata_contig26050.7114.1 vs. uniprot
Match: A0A2K3KY79_TRIPR (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KY79_TRIPR)

HSP 1 Score: 180 bits (456), Expect = 3.690e-48
Identity = 97/231 (41.99%), Postives = 138/231 (59.74%), Query Frame = 0
Query:   15 QTTERLELVHTDIAGPVDKSFEG-RGFAIVFVDDYSRMNKVYVLRHKSEALWALKQFERDIAKNNGLQIKHLPSDQGGTFTEEAFRPFDAENCIKQEFSAAYTPQPNDVAERNWRSIFEMTRSKMITANMGRRYWAEAAHATMYCLNRTPTRPHNGGTQYETRHGMTQKLDNLRVFSCTAYVMFQSQQRRKLDDEARAEMFLGYDEDSLSYRIYYPENKSVQLSRDVRFDE 244
            + +E+LELVH DI GP+    EG + + I F+DDYSR   VY L +KS+A    K F+  + K   L IK L +D+GG FT   F+ +   N IK++ +AAYTPQ N VAER  R++  M RS ++  N+ R++WAEA +   Y LNR PT      T  E   G+   + +LRVF C AY      +R KL+D++R  +  G  E+S +YR+Y P +K + +SRDV F+E
Sbjct:  183 RASEKLELVHADICGPISPFSEGNKRYFICFIDDYSRKAWVYFLAYKSDAFTTFKLFKALVEKETDLSIKCLRTDRGGEFTSNEFKEYCKMNGIKRQLTAAYTPQQNGVAERKNRTVMNMVRSLLVEKNVPRKFWAEAVNWAFYVLNRCPTSSVKEMTPVEAWCGVKPSVGHLRVFGCIAYAHVPDARRTKLEDKSRCCVLFGVSEESKAYRLYDPTSKRIIISRDVVFEE 413          
BLAST of mRNA_H-paniculata_contig26050.7114.1 vs. uniprot
Match: A0A251UIF2_HELAN (Integrase catalytic domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UIF2_HELAN)

HSP 1 Score: 180 bits (456), Expect = 4.200e-48
Identity = 98/239 (41.00%), Postives = 144/239 (60.25%), Query Frame = 0
Query:    7 PVKKYWEEQTTERLELVHTDIAGPV-DKSFEGRGFAIVFVDDYSRMNKVYVLRHKSEALWALKQFERDIAKNNGLQIKHLPSDQGGTFTEEAFRPFDAENCIKQEFSAAYTPQPNDVAERNWRSIFEMTRSKMITANMGRRYWAEAAHATMYCLNRTPTRPHNGGTQYETRHGMTQKLDNLRVFSCTAYVMFQSQQRRKLDDEARAEMFLGYDEDSLSYRIYYPENKSVQLSRDVRFDE 244
            P K  W  Q ++ L+LVH+DI GP+  +S  G  + I F+DDY+R + VY L++KSEAL   K+F+    K +   IK L SD+GG +   AF+ +   NCI+ + + +Y+PQ N VAER  R++ E++RS M    +   YWAEA     Y LNRT T+     T YE  +G    +++L+VF C AYV    Q+R KLD +    +F+GY E+S  Y++Y P++  + +SRDV FDE
Sbjct:  482 PRKAMW--QASKPLQLVHSDICGPMRTESIGGCRYFITFIDDYTRKSWVYFLKYKSEALNYFKRFKALNEKQSDHLIKTLRSDRGGEYCSNAFQEYLKVNCIRHQLTNSYSPQQNGVAERKNRTLMELSRSMMNAKELPNCYWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGYSENSKGYKLYNPQSNKIIISRDVVFDE 718          
BLAST of mRNA_H-paniculata_contig26050.7114.1 vs. uniprot
Match: A0A6D2IM54_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IM54_9BRAS)

HSP 1 Score: 177 bits (449), Expect = 3.610e-47
Identity = 97/239 (40.59%), Postives = 144/239 (60.25%), Query Frame = 0
Query:    7 PVKKYWEEQTTERLELVHTDIAGPV-DKSFEGRGFAIVFVDDYSRMNKVYVLRHKSEALWALKQFERDIAKNNGLQIKHLPSDQGGTFTEEAFRPFDAENCIKQEFSAAYTPQPNDVAERNWRSIFEMTRSKMITANMGRRYWAEAAHATMYCLNRTPTRPHNGGTQYETRHGMTQKLDNLRVFSCTAYVMFQSQQRRKLDDEARAEMFLGYDEDSLSYRIYYPENKSVQLSRDVRFDE 244
            P K  W  + +  L+LVHTDI GP+   S  G+ + I F+DDYSR    ++L  KSEAL A K+F+    +  GL +  L SD+GG +   AF+ +  EN IK++ +AAYTPQ N +AER  RSI  M R  M+  ++ RR+W EA    ++ LNR+P+      T  E        ++++RVF C AY +   ++R KLD+++   +F+G  ++S +YR+Y PE K + +SRDVRFDE
Sbjct:  488 PKKSSW--RASRALQLVHTDICGPIAPTSASGKRYIINFIDDYSRKCWSFLLAEKSEALRAFKEFKVAAEREMGLSLVSLRSDRGGEYNSAAFQDYCRENGIKRQLTAAYTPQQNGIAERKNRSIMNMARCMMLGMSVPRRFWPEAVQYAVHVLNRSPSAALGDVTPDERWSNHKPSVEHVRVFGCVAYALVPYERRVKLDEKSIQCVFVGVSKESKAYRLYNPETKKIIISRDVRFDE 724          
BLAST of mRNA_H-paniculata_contig26050.7114.1 vs. uniprot
Match: A0A2U1M839_ARTAN (Copia-type polyprotein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1M839_ARTAN)

HSP 1 Score: 176 bits (447), Expect = 4.630e-47
Identity = 92/228 (40.35%), Postives = 135/228 (59.21%), Query Frame = 0
Query:   18 ERLELVHTDIAGPVDKSFEGRG-FAIVFVDDYSRMNKVYVLRHKSEALWALKQFERDIAKNNGLQIKHLPSDQGGTFTEEAFRPFDAENCIKQEFSAAYTPQPNDVAERNWRSIFEMTRSKMITANMGRRYWAEAAHATMYCLNRTPTRPHNGGTQYETRHGMTQKLDNLRVFSCTAYVMFQSQQRRKLDDEARAEMFLGYDEDSLSYRIYYPENKSVQLSRDVRFDE 244
            E L+L+HTD+ GP+     G+  + ++ +DD+SR   VY L+ KS+A  A K F+  + K  GL+IK + SD+GG F  + F  F  +N I++  +A+Y+PQ N V ER  R+I  M RS +    M + +W EA    +Y LNR P++  +  T  E  +GM   + +LRVF   AYV   SQ+R KLDD +   +F+GYD+ S  Y++Y P    V +SRDV FDE
Sbjct:  483 EPLQLIHTDLCGPITPPSHGKNLYFMLLIDDFSRKTWVYFLKEKSQAFEAFKIFKAMVEKEKGLKIKSMRSDRGGEFLSKEFNKFCEDNGIRRFLTASYSPQQNGVVERKNRTILNMVRSMLKIKKMPKEFWTEAVDCAVYLLNRCPSKSLDNKTPQEAWNGMKPTVSHLRVFESIAYVHVPSQRRSKLDDRSEKHVFVGYDKHSKGYKLYSPVTGKVVVSRDVEFDE 710          
BLAST of mRNA_H-paniculata_contig26050.7114.1 vs. uniprot
Match: V9H0W6_ARATH (Lectin receptor kinase (Fragment) n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=V9H0W6_ARATH)

HSP 1 Score: 174 bits (440), Expect = 6.050e-47
Identity = 88/231 (38.10%), Postives = 139/231 (60.17%), Query Frame = 0
Query:   15 QTTERLELVHTDIAGPVD-KSFEGRGFAIVFVDDYSRMNKVYVLRHKSEALWALKQFERDIAKNNGLQIKHLPSDQGGTFTEEAFRPFDAENCIKQEFSAAYTPQPNDVAERNWRSIFEMTRSKMITANMGRRYWAEAAHATMYCLNRTPTRPHNGGTQYETRHGMTQKLDNLRVFSCTAYVMFQSQQRRKLDDEARAEMFLGYDEDSLSYRIYYPENKSVQLSRDVRFDE 244
            ++T+ +EL+HTD+ GP+  KS     + ++F+DD+SR   VY L+ KSE     K+F+  + K +GL IK + SD GG FT + F  +  +N I+++ +   +PQ N VAER  R+I EM RS + +  + +  WAEA    +Y LNR+PT+  +G T  E   G    + +LRVF   A+     ++R KLDD++   +F+GYD +S  Y++Y P+ K   +SR++ FDE
Sbjct:   19 KSTKTVELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 249          
BLAST of mRNA_H-paniculata_contig26050.7114.1 vs. uniprot
Match: A0A2Z7CM54_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CM54_9LAMI)

HSP 1 Score: 176 bits (445), Expect = 8.520e-47
Identity = 92/226 (40.71%), Postives = 133/226 (58.85%), Query Frame = 0
Query:   20 LELVHTDIAGPVDKSFEGRG-FAIVFVDDYSRMNKVYVLRHKSEALWALKQFERDIAKNNGLQIKHLPSDQGGTFTEEAFRPFDAENCIKQEFSAAYTPQPNDVAERNWRSIFEMTRSKMITANMGRRYWAEAAHATMYCLNRTPTRPHNGGTQYETRHGMTQKLDNLRVFSCTAYVMFQSQQRRKLDDEARAEMFLGYDEDSLSYRIYYPENKSVQLSRDVRFDE 244
            LEL+H+D+ GP+  S  G+  + I+F+DD+SR   VY ++ KSE     K+F+  + K +G QI+ L SD+GG FT   F+ F  +N I +  +  Y+PQ N V+ER  R+I  M RS +   NM + +WAEA    +Y  NR  T+  NG T  E   G    + +LRVF   AY     ++R KLDD++   +F+GYD +S  Y++Y P N  + LSRDV FDE
Sbjct:  476 LELIHSDVCGPIKPSSLGKSNYFIIFIDDFSRKTWVYFIKEKSEVFETFKKFKIMVEKQSGYQIQALRSDRGGEFTSNEFKKFCEDNGIHRPMTTPYSPQQNGVSERKNRTILNMVRSMLKRKNMPKEFWAEAVTCAVYLTNRWHTKSVNGKTPNEDCSGYKPNVAHLRVFGSIAYAHVPDEKRTKLDDKSARYVFIGYDTNSKCYKLYNPNNGKIILSRDVEFDE 701          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26050.7114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F0044642.960e-4941.59DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A2H9ZU53_9ASPA3.390e-4941.13Retrovirus-related Pol polyprotein from transposon... [more]
A0A2Z6P4L8_TRISU3.690e-4941.99Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A151T355_CAJCA3.020e-4837.55Retrovirus-related Pol polyprotein from transposon... [more]
A0A2K3KY79_TRIPR3.690e-4841.99Copia-type polyprotein (Fragment) n=1 Tax=Trifoliu... [more]
A0A251UIF2_HELAN4.200e-4841.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6D2IM54_9BRAS3.610e-4740.59Uncharacterized protein n=2 Tax=Microthlaspi errat... [more]
A0A2U1M839_ARTAN4.630e-4740.35Copia-type polyprotein n=1 Tax=Artemisia annua Tax... [more]
V9H0W6_ARATH6.050e-4738.10Lectin receptor kinase (Fragment) n=1 Tax=Arabidop... [more]
A0A2Z7CM54_9LAMI8.520e-4740.71Uncharacterized protein (Fragment) n=1 Tax=Dorcoce... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 18..130
e-value: 1.4E-14
score: 54.3
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 3..180
score: 16.849
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 10..213
e-value: 4.7E-27
score: 96.5
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 15..243
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 15..243
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 17..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26050contigH-paniculata_contig26050:2404..3135 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26050.7114.1mRNA_H-paniculata_contig26050.7114.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26050 2404..3135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26050.7114.1 ID=prot_H-paniculata_contig26050.7114.1|Name=mRNA_H-paniculata_contig26050.7114.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
GEASKQPVKKYWEEQTTERLELVHTDIAGPVDKSFEGRGFAIVFVDDYSR
MNKVYVLRHKSEALWALKQFERDIAKNNGLQIKHLPSDQGGTFTEEAFRP
FDAENCIKQEFSAAYTPQPNDVAERNWRSIFEMTRSKMITANMGRRYWAE
AAHATMYCLNRTPTRPHNGGTQYETRHGMTQKLDNLRVFSCTAYVMFQSQ
QRRKLDDEARAEMFLGYDEDSLSYRIYYPENKSVQLSRDVRFDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf