mRNA_H-paniculata_contig2605.7112.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2605.7112.1 vs. uniprot
Match: D8LAV3_ECTSI (Methylase-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV3_ECTSI) HSP 1 Score: 304 bits (778), Expect = 3.810e-91 Identity = 169/289 (58.48%), Postives = 202/289 (69.90%), Query Frame = 3
Query: 933 ARKAIDMVQAALGRRDEAAANLALPVAKSPSATGEKVARGVDVNHFSAVEATATGGELPVGRDLAEVAGAGNGGYAFDEEP----TREPESALRTRNNPAASHSPLAHLLWRQVARPGDTVVDFTAGNGFDSLELAKIVALEDGVGRLFCVDVQEPAIEATRQKLQSELGEGAINRTTFKKGNFREIPEGLGPMSVQLVVYNLGWLPGGDKSITTELEDTLKSIENSKRLVKSGGMISVMCYSGHAEGLRETEALLEYARGLTHYHWRVFVHERSNRPGAPILITIYRL 1787
A+ AI MVQAAL RRD A L G + + + PV + A + G+G + E T+EPESA +RNNPAASHS +AHLLWRQVA PGDTV+D TAGNG DSLELAKIVAL+DGVG L+ +DVQE AIEATR++L+SELGE A+ R+T GNFRE+P L P+SVQLVVYNLGWLPGGDKSITT+LEDTL+SIE +KR+VK GGMISVM Y GHAEG RETEA+ +YA GL H WRVF+HER NR +P L+TI++L
Sbjct: 191 AQDAIGMVQAALDRRDSATVEL-----------------GAESSE-----------DTPVAAETAVLTSRGDGSVSDGGEEGGDGTKEPESARWSRNNPAASHSHMAHLLWRQVAGPGDTVLDCTAGNGHDSLELAKIVALKDGVGSLYVMDVQERAIEATRERLRSELGELALKRSTLINGNFREMPAELEPLSVQLVVYNLGWLPGGDKSITTKLEDTLESIEAAKRVVKHGGMISVMLYRGHAEGKRETEAVRDYAAGLAHSQWRVFMHERINRADSPELLTIFKL 451
BLAST of mRNA_H-paniculata_contig2605.7112.1 vs. uniprot
Match: A0A6H5JPN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN0_9PHAE) HSP 1 Score: 295 bits (755), Expect = 9.930e-88 Identity = 171/285 (60.00%), Postives = 201/285 (70.53%), Query Frame = 3
Query: 933 ARKAIDMVQAALGRRDEAAANLALPVAKSPSATGEKVARGVDVNHFSAVEATATGGELPVGRDLAEVAGAGNGGYAFDEEPTREPESALRTRNNPAASHSPLAHLLWRQVARPGDTVVDFTAGNGFDSLELAKIVALEDGVGRLFCVDVQEPAIEATRQKLQSELGEGAINRTTFKKGNFREIPEGLGPMSVQLVVYNLGWLPGGDKSITTELEDTLKSIENSKRLVKSGGMISVMCYSGHAEGLRETEALLEYARGLTHYHWRVFVHERSNRPGAPILITIYRL 1787
A+ AI MVQAAL RRD AA L G K + V +AV T+ GGE +G+G T+EPESA +RNNPAASHS +AHLLWRQVA PGDTV+D TAGNG DSLELAKIVAL+DGVG L+ +D E AIEATR++L+SELGE A+ R+T NFRE+P L P+SVQLVVYNLGWLPGGDKSITT LEDTL+SIE +KR+VK GGMISVM Y GHAEG RETEA+ +YA L H WRVF+HER NR G+P L+TI++L
Sbjct: 205 AQDAIGMVQAALDRRDSAAVEL-----------GAKSSEDTQVAAEAAV-LTSRGGEE-----------SGDG--------TKEPESARWSRNNPAASHSHMAHLLWRQVAGPGDTVLDCTAGNGHDSLELAKIVALKDGVGSLYIMD--ERAIEATRERLRSELGELALKRSTLINSNFREMPAELEPLSVQLVVYNLGWLPGGDKSITTTLEDTLESIEAAKRVVKHGGMISVMLYRGHAEGKRETEAVRDYAASLAHSQWRVFMHERINRAGSPELLTIFKL 456
BLAST of mRNA_H-paniculata_contig2605.7112.1 vs. uniprot
Match: A0A0G4GWR6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GWR6_VITBC) HSP 1 Score: 168 bits (426), Expect = 3.110e-44 Identity = 86/197 (43.65%), Postives = 120/197 (60.91%), Query Frame = 3
Query: 1209 NNPAASHSPLAHLLWRQVARPGDTVVDFTAGNGFDSLELAKIVALEDG----VGRLFCVDVQEPAIEATRQKLQSELGEGAINRTTFKKGNFREIPEGLGPMSVQLVVYNLGWLPGGDKSITTELEDTLKSIENSKRLVKSGGMISVMCYSGHAEGLRETEALLEYARGLTHYHWRVFVHERSNRPGAPILITIYRL 1787
++P ASH PL+ LLW+Q +PG VD T GNG DSL L+ ++ DG L C+DVQ AI +TR L EL + R + P+ + SV ++VYNLG+LPGGDKS+TT + T+ S+ + +L+ GG+ISVM Y GH EG E++ ++ +A L WRVF+HE NRP +P L+T+YRL
Sbjct: 9 SSPLASHLPLSRLLWKQGLKPGGRAVDATCGNGKDSLFLSTLIFPSDGDDETEAELICIDVQREAIGSTRSLLAEELRPPHLERIRLFHQSHERFPDCIADNSVDVIVYNLGYLPGGDKSVTTRHDTTITSLTAALKLIVKGGLISVMLYRGHPEGTVESDGVISWASQLPADEWRVFLHEPLNRPTSPALMTLYRL 205
BLAST of mRNA_H-paniculata_contig2605.7112.1 vs. uniprot
Match: A0A836C882_9STRA (Putative rRNA methylase-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C882_9STRA) HSP 1 Score: 167 bits (424), Expect = 5.330e-44 Identity = 87/198 (43.94%), Postives = 119/198 (60.10%), Query Frame = 3
Query: 1236 LAHLLWRQVARPGDTVVDFTAGNGFDSLELAKIVALEDGV---------GRLFCVDVQEPAIEATRQKLQSELGEGAINRTTFKKGNFREIPEGLGP----MSVQLVVYNLGWLPGGDKSITTELEDTLKSIENSKRLVKSGGMISVMCYSGHAEGLRETEALLEYARGLTHYHWRVFVHERSNRP-GAPILITIYRL 1787
LAHLLW+ PGD V+D TAG G+DSL LA+++ + + G+L C+DVQE A+ T+ +LQ L A+ R + + +F E+P P SV LV YNLG+LPG DKS+ + ++DTL S+ + +LVK GG ISV CY GH EG E A+ E+ GL WRVF H R N P G P+L+ Y++
Sbjct: 2 LAHLLWKSAVSPGDIVIDCTAGKGYDSLVLARLLFPDSALDGEAAAAAQGQLVCIDVQESAVAQTQARLQQALPPQAMQRISVLQQSFCELPPACEPPIAERSVALVAYNLGFLPGSDKSVCSTVQDTLDSLNKASKLVKLGGAISVTCYPGHEEGAAEVAAVKEWGAGLATREWRVFEHSRLNSPEGVPLLVVAYKV 199
BLAST of mRNA_H-paniculata_contig2605.7112.1 vs. uniprot
Match: A0A7W1U209_9BACT (Methyltransferase domain-containing protein n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U209_9BACT) HSP 1 Score: 159 bits (402), Expect = 4.010e-41 Identity = 81/184 (44.02%), Postives = 114/184 (61.96%), Query Frame = 3
Query: 1227 HSPLAHLLWRQVARPGDTVVDFTAGNGFDSLELAKIVALEDGVGRLFCVDVQEPAIEATRQKLQSELGEGAINRTTFKKGNFREIPEGLGPMSVQLVVYNLGWLPGGDKSITTELEDTLKSIENSKRLVKSGGMISVMCYSGHAEGLRETEALLEYARGLTHYHWRVFVHERSNRPGAPILITI 1778
H +AH LW + +PGDTV+D T GNG D+ LAK+ AL G LF +D+Q AI TR L+ EL + NR TF + PE + SV+L++YNLG+LPG +K++TT E TL+S++ +++L+ G+I V CY GH EG +E ALL+Y R L W+V + NR GAP L+ +
Sbjct: 7 HLDMAHSLWHESVQPGDTVIDATCGNGQDTRILAKL-ALNAHQGTLFALDIQAQAIVTTRNLLEQELPQDLFNRITFLEQCHSHFPEAVLENSVRLIIYNLGYLPGANKALTTRTETTLQSLQEAQKLLLENGIICVTCYPGHDEGKKEEAALLDYVRSLPTTEWQVSFTQWVNRVGAPSLLVL 189
BLAST of mRNA_H-paniculata_contig2605.7112.1 vs. uniprot
Match: A0A0U5JHE0_9BACT (Putative rRNA methylase n=1 Tax=Candidatus Protochlamydia naegleriophila TaxID=389348 RepID=A0A0U5JHE0_9BACT) HSP 1 Score: 149 bits (376), Expect = 1.690e-37 Identity = 78/187 (41.71%), Postives = 108/187 (57.75%), Query Frame = 3
Query: 1224 SHSPLAHLLWRQVARPGDTVVDFTAGNGFDSLELAKIVALEDGVGRLFCVDVQEPAIEATRQKLQSELGEGAINRTTFKKGNFREIPEGLGPMSVQLVVYNLGWLPGGDKSITTELEDTLKSIENSKRLVKSGGMISVMCYSGHAEGLRETEALLEYARGLTHYHWRVFVHERSNRPGAPILITIYR 1784
SH LAH W ++ +PGD +D T GNG D+L+L ++ AL G ++ +D Q AIE T+ L L I G + P + P S++L+VYNLG+LPGGDK+ TTE TL S++ + LV GG ISV CY GH EG RE EA+LE+ + L+ W H+ NR AP L+ + +
Sbjct: 10 SHLDLAHHYWSKLLKPGDRAIDATCGNGHDTLKLCQL-ALCQSEGEIYALDRQSEAIENTKAYLNQNLLPSQIEHIHLILGCHSQFPASITPTSIKLIVYNLGYLPGGDKAETTETSTTLLSLQEALNLVVPGGAISVTCYPGHLEGAREEEAILEWIKTLSPLEWSACHHKWINRRHAPSLLLLQK 195
BLAST of mRNA_H-paniculata_contig2605.7112.1 vs. uniprot
Match: UPI0008382295 (methyltransferase domain-containing protein n=1 Tax=Parachlamydia sp. C2 TaxID=1414722 RepID=UPI0008382295) HSP 1 Score: 149 bits (375), Expect = 2.300e-37 Identity = 75/196 (38.27%), Postives = 112/196 (57.14%), Query Frame = 3
Query: 1197 LRTRNNPAASHSPLAHLLWRQVARPGDTVVDFTAGNGFDSLELAKIVALEDGVGRLFCVDVQEPAIEATRQKLQSELGEGAINRTTFKKGNFREIPEGLGPMSVQLVVYNLGWLPGGDKSITTELEDTLKSIENSKRLVKSGGMISVMCYSGHAEGLRETEALLEYARGLTHYHWRVFVHERSNRPGAPILITIYR 1784
+R+ + SH LAH W Q+ RPGD+ +D T G G D+L+L ++ DG G +F +D Q AIE ++ L L + R + G P L SV+L+VYNLG+LPG +K +TT+ TL+S+ +++ L++ GG IS+ CY GH EG E EA+L YA L+ W + H NR +P L+ + +
Sbjct: 1 MRSHYSLFQSHLDLAHHYWDQLLRPGDSAIDATCGKGRDTLKLCQLALSSDG-GNVFAIDCQSAAIEQAKEYLSHTLSPEQLKRLRLEVGCHSHFPFNLSAESVKLIVYNLGYLPGSNKELTTQTSTTLQSLTHAQHLLRPGGAISITCYPGHREGAIEEEAILTYASSLSPMEWSICHHRWLNRRLSPSLLLLQK 195
BLAST of mRNA_H-paniculata_contig2605.7112.1 vs. uniprot
Match: A0A7X5Q8B2_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7X5Q8B2_9BACT) HSP 1 Score: 148 bits (374), Expect = 3.440e-37 Identity = 75/187 (40.11%), Postives = 111/187 (59.36%), Query Frame = 3
Query: 1224 SHSPLAHLLWRQVARPGDTVVDFTAGNGFDSLELAKIVALEDGVGRLFCVDVQEPAIEATRQKLQSELGEGAINRTTFKKGNFREIPEGLGPMSVQLVVYNLGWLPGGDKSITTELEDTLKSIENSKRLVKSGGMISVMCYSGHAEGLRETEALLEYARGLTHYHWRVFVHERSNRPGAPILITIYR 1784
SH LAH W+ + + GDTV+D T GNG D+L LA + AL G L+ +DVQ AI++++Q LQ L + NR F + + P + SV L+ YNLG+LPGGDK+ TT E T+ S++ +++L+K GG+I + CY GHA G E + +L + + L W H +NR AP L+ + +
Sbjct: 10 SHIDLAHNHWKTLVKTGDTVIDATCGNGHDTLVLATL-ALSATSGTLYALDVQSAAIDSSKQHLQENLPQDVFNRIHFVERCHSQFPPEISHHSVMLIAYNLGYLPGGDKTETTTAETTIASLQKAQQLIKDGGVICITCYPGHAAGKEEEKRVLAFMKTLEPKQWSCSHHCWTNRNNAPSLVLVQK 195
BLAST of mRNA_H-paniculata_contig2605.7112.1 vs. uniprot
Match: F8L8X3_SIMNZ (Hypothetical rRNA methylase n=2 Tax=Simkania negevensis TaxID=83561 RepID=F8L8X3_SIMNZ) HSP 1 Score: 146 bits (368), Expect = 1.810e-36 Identity = 76/190 (40.00%), Postives = 111/190 (58.42%), Query Frame = 3
Query: 1224 SHSPLAHLLWRQVARPGDTVVDFTAGNGFDSLELAKIVALEDGVGRLFCVDVQEPAIEATRQKLQSELGEGAINRTTFKKGNFREIPEGLGPMSV--QLVVYNLGWLPGGDKSITTELEDTLKSIENSKRLVKSGGMISVMCYSGHAEGLRETEALLEYARGLTHYHWRVFVHERSNRPGAPILITIYRL 1787
SH LAH W+ +PGD V+D T GNG+DSL LA++V+ G + C+D+QE AI ATR+KL+ L T+ G+ P P+ L+VYNLG+LPG DK++ T+ +TLKS++ + L+K GG I + CY GH G E + LL +++ L + V H+ NR +P L+ I +L
Sbjct: 13 SHIELAHQYWKSFLKPGDFVIDATCGNGYDSLALAQMVS-----GHVLCIDIQERAINATREKLKKNLTPSIFKVITYHLGSHEHFP----PLKAAPSLIVYNLGYLPGSDKTVVTDAFETLKSLKEALSLLKPGGAICLTCYVGHPGGEEEEKMLLSFSKSLNKNDFNVCYHQWINRLKSPSLLLIQKL 193
BLAST of mRNA_H-paniculata_contig2605.7112.1 vs. uniprot
Match: A0A2H9SWP1_9BACT (rRNA methyltransferase n=1 Tax=Parachlamydia sp. TaxID=2052048 RepID=A0A2H9SWP1_9BACT) HSP 1 Score: 145 bits (366), Expect = 3.580e-36 Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = 3
Query: 1224 SHSPLAHLLWRQVARPGDTVVDFTAGNGFDSLELAKIVALEDGVGRLFCVDVQEPAIEATRQKLQSELGEGAINRTTFK---KGNFREIPEGLGPMSVQLVVYNLGWLPGGDKSITTELEDTLKSIENSKRLVKSGGMISVMCYSGHAEGLRETEALLEYARGLTHYHWRVFVHERSNRPGAPILITIYR 1784
SH LAH W + RPGDTV+D T GNG D+L+LA++ AL G++ +D+QE ++ AT +L L + R +F +IP P SV+L+VYNLG+LP GDKS TT + T++S++ + L+ GG+I V CY GH EG +E +A+L++ RGL + W + NR AP L+ I R
Sbjct: 10 SHLDLAHQYWTILVRPGDTVIDATCGNGHDTLKLAQL-ALHSDQGQVIGIDLQEQSLLATNARLMEHLSPDLLRRVQLICSCHSSFPDIP----PKSVRLIVYNLGYLPKGDKSRTTRAKTTIESLQAAFPLLMPGGVICVTCYPGHEEGEKEEKAVLDFVRGLDPHEWCCTYQQWMNRQKAPGLLLIQR 194 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2605.7112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2605.7112.1 >prot_H-paniculata_contig2605.7112.1 ID=prot_H-paniculata_contig2605.7112.1|Name=mRNA_H-paniculata_contig2605.7112.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=492bp MALLASPCKAFIPTPTLALARLSASIYSAAAPQHDTTGETLHNIRRSRLRback to top mRNA from alignment at H-paniculata_contig2605:7567..15619+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2605.7112.1 ID=mRNA_H-paniculata_contig2605.7112.1|Name=mRNA_H-paniculata_contig2605.7112.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8053bp|location=Sequence derived from alignment at H-paniculata_contig2605:7567..15619+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2605:7567..15619+ >mRNA_H-paniculata_contig2605.7112.1 ID=mRNA_H-paniculata_contig2605.7112.1|Name=mRNA_H-paniculata_contig2605.7112.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2952bp|location=Sequence derived from alignment at H-paniculata_contig2605:7567..15619+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |