prot_H-paniculata_contig26037.7107.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26037.7107.1
Unique Nameprot_H-paniculata_contig26037.7107.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length52
Homology
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BLAST of mRNA_H-paniculata_contig26037.7107.1 vs. uniprot
Match: A0A6H5J834_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J834_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 3.040e-13
Identity = 29/43 (67.44%), Postives = 39/43 (90.70%), Query Frame = 0 
Query:    1 PFAQKQLTYDREARELLSPLGVAFPITSSGIPNMVPASARMID 43
            PF++  LTYDREARELLSP+GVAFPIT++G+ +M PASAR+++
Sbjct:   30 PFSKLPLTYDREARELLSPVGVAFPITANGVADMTPASARLVE 72
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BLAST of mRNA_H-paniculata_contig26037.7107.1 vs. uniprot
Match: D8LGQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ7_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 3.130e-12
Identity = 29/42 (69.05%), Postives = 37/42 (88.10%), Query Frame = 0 
Query:    1 PFAQKQLTYDREARELLSPLGVAFPITSSGIPNMVPASARMI 42
            PF++  LTYD EARELLSP+GVAFPIT++GI +M PASAR++
Sbjct:    8 PFSKLPLTYDLEARELLSPVGVAFPITANGIADMTPASARLV 49
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26037.7107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J834_9PHAE3.040e-1367.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGQ7_ECTSI3.130e-1269.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.25.10coord: 1..48
e-value: 1.2E-7
score: 33.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26037contigH-paniculata_contig26037:2177..2332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26037.7107.1mRNA_H-paniculata_contig26037.7107.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26037 2177..2332 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26037.7107.1 ID=prot_H-paniculata_contig26037.7107.1|Name=mRNA_H-paniculata_contig26037.7107.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp
PFAQKQLTYDREARELLSPLGVAFPITSSGIPNMVPASARMIDQEFGAPD
A*
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