prot_H-paniculata_contig260.7098.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig260.7098.1
Unique Nameprot_H-paniculata_contig260.7098.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length559
Homology
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BLAST of mRNA_H-paniculata_contig260.7098.1 vs. uniprot
Match: A0A6H5KZ74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ74_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 2.650e-59
Identity = 131/268 (48.88%), Postives = 177/268 (66.04%), Query Frame = 0 
Query:   56 PRTPNAFRYISTLKLAGNRLAVLEDSVAEALTSLQQLNIADNELVEINAAELLPALVFLDCSGNRIGDLPDFVETLKSPPRLNEVIATGNPVASEPQYRLTVVINCPSMQRLDHRLVDRAGLARRFHTVLEAKALSDIREAANEEYYREVEEKRAHLERRKGFLKYQQKQLEDTFQNYRLQRHQEVAQCINYAESLRREDRQGDEGGRG-ALTPKLARSFQDTLKRRRS-----SDLATLAELTEDASYRRGSTDSLRELLHAIVKKE 317
            PR+  AF+ + +LKLA N L   E+  A  LTSL++L+++DNELV I+   L+  L FLDCS NR+  LP F   L +PPRL EVIA GN VASE QYR+TV++ C +++RLDHR VDRA L R+ H   EAKAL+ +RE ANEEY+R VEE+   LE+RK  LK Q++QLED FQ +RLQ+ +E+ +CI YAESL+     GD  G+G  LTP++AR F+D ++ RR      S  A   ++T D   +  +  SL+  L A V +E
Sbjct:  406 PRSGYAFQRMKSLKLASNHLMSFEEDAALELTSLERLDVSDNELVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGNTVASESQYRITVLMACKNIRRLDHRPVDRAALKRQLHRATEAKALASLRETANEEYHRCVEEEGIRLEKRKSILKAQERQLEDAFQGFRLQKQREIGECIAYAESLK-----GDGDGKGLVLTPEVARDFRDAVEDRRQGSEEKSKFADSGDVTTDERTQDENC-SLKTTLRAAVAQE 667
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BLAST of mRNA_H-paniculata_contig260.7098.1 vs. uniprot
Match: D7FPS5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS5_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 4.160e-57
Identity = 120/228 (52.63%), Postives = 159/228 (69.74%), Query Frame = 0 
Query:   56 PRTPNAFRYISTLKLAGNRLAVLEDSVAEALTSLQQLNIADNELVEINAAELLPALVFLDCSGNRIGDLPDFVETLKSPPRLNEVIATGNPVASEPQYRLTVVINCPSMQRLDHRLVDRAGLARRFHTVLEAKALSDIREAANEEYYREVEEKRAHLERRKGFLKYQQKQLEDTFQNYRLQRHQEVAQCINYAESLRREDRQGDEGGRG-ALTPKLARSFQDTLKRRR 282
            PR+  AFR + +LKLA N L   E+  A  LTSL++L+++DNELV I+   L+  L FLDCS NR+  LP F   L + PRL EVIA GN VAS+PQYR+TV++ C  ++RLDHR VD A L R+ H   EAKAL+ +RE ANEEY+R VE +   LERRK  LK Q++QLED FQ +RLQ+ +E+ +CI YAESL+     GD  G+G  LTP++AR+F+D ++ RR
Sbjct:  366 PRSAYAFRRMKSLKLASNHLINFEEDAALELTSLERLDVSDNELVSIDWVGLVETLRFLDCSKNRLSALPTFARALANLPRLAEVIAEGNTVASQPQYRITVLMACEKIRRLDHRPVDGAALKRQLHRATEAKALATLRETANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECIAYAESLK-----GDGDGKGLVLTPEVARAFRDAVEDRR 588
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig260.7098.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZ74_9PHAE2.650e-5948.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPS5_ECTSI4.160e-5752.63Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 65..121
e-value: 1.8E-8
score: 34.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 48..203
e-value: 1.2E-21
score: 78.5
NoneNo IPR availablePANTHERPTHR18849LEUCINE RICH REPEAT PROTEINcoord: 63..367
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 61..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig260contigH-paniculata_contig260:23120..31358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig260.7098.1mRNA_H-paniculata_contig260.7098.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig260 22671..32828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig260.7098.1 ID=prot_H-paniculata_contig260.7098.1|Name=mRNA_H-paniculata_contig260.7098.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=559bp
MDDRRGIRTTTMRKDRETRSHGVAYFSMLRSIDSGVSMQSQMRLDYVAWF
STFPTPRTPNAFRYISTLKLAGNRLAVLEDSVAEALTSLQQLNIADNELV
EINAAELLPALVFLDCSGNRIGDLPDFVETLKSPPRLNEVIATGNPVASE
PQYRLTVVINCPSMQRLDHRLVDRAGLARRFHTVLEAKALSDIREAANEE
YYREVEEKRAHLERRKGFLKYQQKQLEDTFQNYRLQRHQEVAQCINYAES
LRREDRQGDEGGRGALTPKLARSFQDTLKRRRSSDLATLAELTEDASYRR
GSTDSLRELLHAIVKKEQRCYNDDVADVSTTRRSLSSTERLTPQRRSNGM
AAARSSRTNSSPHDSLRDQSTERSEDYSYDSVDEIHSSSGGSSTINGERE
KQRGDSEKGSRGSQGDNSTKLSRDKQSENDSKATTTDERMDSARGGFVDR
TQLGSSSRGLDSSVAGGRSKVGSKVDRVASDAEGGSGGSSVRGSREKVLR
ETPRTPRKANEARVTVSDPAEDSDSSKAGIIRAASGKSETEGKRGEFSRF
FGFGRHHP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf