prot_H-paniculata_contig25993.7094.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25993.7094.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 140 bits (353), Expect = 1.150e-33 Identity = 87/254 (34.25%), Postives = 132/254 (51.97%), Query Frame = 0
Query: 41 RGIARELAGLTVRIPSHAVLLPPRQDESQVLTEDERGEANWRGRLKTWYGEGKKAGKGMATKEFRLFFLCGHDNSLAECGVDGKGYRIETHRKWVTKCLPFAKALLVVVNIALKNFAGLSIPIEGIAGVGGQSLDKALSSMVEDTAEALADNACSAGVQRLDEASATEENLEQSTLADGSQGVGNLNVSRLPTPREAM--KTLEQFIRQLTLEGLKKSSRSHPFLCFDTTMQLVDKAQKGEVWSWVREKNVRAF 292
R + +++A L IP +LP + ++ L E +R W L+ W +GK+ GKG AT++ R+FFLC +D SLAECG G+GY + W K +PFA+ + +IAL+ GL+IP G ALS E++ + ++ S +RLD A E L Q A G+Q P+P + +TL++ I+ ++G++ S PF FD M LVD+ +GE W+WVR KN+ F
Sbjct: 1005 RSMRQDVAFLRWPIPRLVCVLPAPESRAKPLEEKDRSFEQWSATLRNWCVDGKRTGKGFATRKLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIALRVCIGLAIPEVDFEATLGTVAGGALSKFAEESLNSGIESVASIAGERLDGGRA--EGLPQGAGAHGAQ-------QGWPSPVQGFTYETLKEVIKSFEVDGMRGRS---PFPSFDAKMHLVDRGGRGEEWAWVRTKNIDQF 1246
BLAST of mRNA_H-paniculata_contig25993.7094.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI) HSP 1 Score: 124 bits (312), Expect = 3.050e-28 Identity = 93/283 (32.86%), Postives = 130/283 (45.94%), Query Frame = 0
Query: 32 LEPHRSSHLRGIARELAGLTVRIPSHAVLLPPRQDESQVLTEDERGEANWRGRLKTW-------------------YGEGKKAGKGMATKEFRLFFLCGHDNSLAECGVDGKGYRIETHRKWVTKCLPFAKALLVVVNIALKNFAGLSIPIEGIAGVGGQSLDKALSSMVEDTAEALADNACSAGVQRLD--EASATEENLEQSTL-ADGSQGVGNLNVSRLPTPREAMKTLEQFIRQLTLEGLKKSSRSHPFLCFDTTMQLVDKAQKGEVWSWVREKNVRAF 292
L P L G+ARE+A L IP +LP R L+E +R W LK W G K +G+ T+E RLFFLCG D SLAECG DG+GY ++ WV K P AK L + +IALK GL++ + G S D +S+ VED A + S RLD + S E L + + DG Q + +P L++ I+ ++ ++ +P FDTTM +VD+ G W+WVR +N+ F
Sbjct: 868 LRPTERDILVGVAREVAILRWPIPRFVCVLPARDTR---LSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGTSED--MSAFVEDALSAGIEGTTSKAGNRLDRLQNSGPSERLPHAGVRGDGMQTL-------IPLEGFDYDKLKEVIKSFEVDRTQRDGSRYP--SFDTTMNIVDRRGHGVEWAWVRNRNIDQF 1136 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25993.7094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig25993.7094.1 ID=prot_H-paniculata_contig25993.7094.1|Name=mRNA_H-paniculata_contig25993.7094.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=295bpback to top |