prot_H-paniculata_contig25986.7090.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25986.7090.1
Unique Nameprot_H-paniculata_contig25986.7090.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length160
Homology
BLAST of mRNA_H-paniculata_contig25986.7090.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 5.530e-47
Identity = 84/147 (57.14%), Postives = 101/147 (68.71%), Query Frame = 0
Query:    1 MSKPSKARMAVTKHLLRYLIGTMDFVITYKQGSFKLTAFSDANCGNKPDNGNSMSSFIAMLSNAPVSFKVGLQGLTAQSTMEVELVAAALMMKESVVLLEHGEGVRIRHALDSVPVYIDNTLALHVAGNRTYSSHVRHIALRYFFIR 147
            M+KPSK      K  LRYL GT+DF ITYK+G FKL  FSD+N  N PDNG S SS++ ML+NAP+SF+ GLQGLTA STME ELVA+AL MKE+V        +        +PVY DNT  LH  GNR++SS  +HIALR+FFIR
Sbjct:   22 MAKPSKVHTVTAKQTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIR 168          
BLAST of mRNA_H-paniculata_contig25986.7090.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.100e-46
Identity = 86/147 (58.50%), Postives = 103/147 (70.07%), Query Frame = 0
Query:    1 MSKPSKARMAVTKHLLRYLIGTMDFVITYKQGSFKLTAFSDANCGNKPDNGNSMSSFIAMLSNAPVSFKVGLQGLTAQSTMEVELVAAALMMKESVVLLEHGEGVRIRHALDSVPVYIDNTLALHVAGNRTYSSHVRHIALRYFFIR 147
            M+KPSK  M   KH LRYL GT+DF ITYK+G FKL  FSD+N  N PDNG S SS++ ML+NAP+SF+ GLQGLTA STME ELVA+AL MKE+V        +        +PVY DNT  LH  GNR++SS  +HIALR+FFIR
Sbjct:  247 MAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIR 393          
BLAST of mRNA_H-paniculata_contig25986.7090.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.280e-45
Identity = 89/151 (58.94%), Postives = 107/151 (70.86%), Query Frame = 0
Query:    1 MSKPSKARMAVTKHLLRYLIGTMDFVITYKQGSFKLTAFSDANCGNKPDNGNSMSSFIAMLSNAPVSFKVGLQGLTAQSTMEVELVAAALMMKESV----VLLEHGEGVRIRHALDSVPVYIDNTLALHVAGNRTYSSHVRHIALRYFFIR 147
            M+KPSK  M   KH LRYL GT+DF ITYK+G FKL  FSD+N  N PDNG S SS++ ML+NAP+SF+ GLQGLTA STME ELVA+AL MKE+V    ++ E G G         +PVY DNT  LH  GNR++SS  +HIALR+FFIR
Sbjct:  468 MAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQ----LPVYCDNTATLHALGNRSFSSRTKHIALRFFFIR 614          
BLAST of mRNA_H-paniculata_contig25986.7090.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 9.490e-45
Identity = 86/147 (58.50%), Postives = 103/147 (70.07%), Query Frame = 0
Query:    1 MSKPSKARMAVTKHLLRYLIGTMDFVITYKQGSFKLTAFSDANCGNKPDNGNSMSSFIAMLSNAPVSFKVGLQGLTAQSTMEVELVAAALMMKESVVLLEHGEGVRIRHALDSVPVYIDNTLALHVAGNRTYSSHVRHIALRYFFIR 147
            M+KPSK  M   KH LRYL GT+DF ITYK+G FKL  FSD+N  N PDNG S SS++ ML+NAP+SF+ GLQGLTA STME ELVA+AL MKE+V        +        +PVY DNT  LH  GNR++SS  +HIALR+FFIR
Sbjct:  807 MAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIR 953          
BLAST of mRNA_H-paniculata_contig25986.7090.1 vs. uniprot
Match: A0A6H5KNV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV2_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.050e-44
Identity = 82/142 (57.75%), Postives = 98/142 (69.01%), Query Frame = 0
Query:    1 MSKPSKARMAVTKHLLRYLIGTMDFVITYKQGSFKLTAFSDANCGNKPDNGNSMSSFIAMLSNAPVSFKVGLQGLTAQSTMEVELVAAALMMKESVVLLEHGEGVRIRHALDSVPVYIDNTLALHVAGNRTYSSHVRHIALR 142
            M+KPSK  M   KH LRYL GT+DF ITYK+G FKL  FSD+N  N PDNG S SS++ ML+NAP+SF+ GLQGLTA STME ELVA+AL MKE+V        +        +PVY DNT  LH  GNR++SS  +HIALR
Sbjct:  124 MAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALR 265          
BLAST of mRNA_H-paniculata_contig25986.7090.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 1.210e-43
Identity = 84/147 (57.14%), Postives = 102/147 (69.39%), Query Frame = 0
Query:    1 MSKPSKARMAVTKHLLRYLIGTMDFVITYKQGSFKLTAFSDANCGNKPDNGNSMSSFIAMLSNAPVSFKVGLQGLTAQSTMEVELVAAALMMKESVVLLEHGEGVRIRHALDSVPVYIDNTLALHVAGNRTYSSHVRHIALRYFFIR 147
            M+KPSK  M   KH LRYL GT+DF ITYK+G FKL  FSD+N  N PDNG S SS++ +L+NAP+SF+ GLQGLTA STME ELVA+AL M E+V        +        +PVY DNT  LH  GNR++SS  +HIALR+FFIR
Sbjct: 1476 MAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIR 1622          
BLAST of mRNA_H-paniculata_contig25986.7090.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 2.540e-42
Identity = 90/151 (59.60%), Postives = 106/151 (70.20%), Query Frame = 0
Query:    1 MSKPSKARMAVTKHLLRYLIGTMDFVITYKQGSFKLTAFSDANCGNKPDNGNSMSSFIAMLSNAPVSFKVGLQGLTAQSTMEVELVAAALMMKESV----VLLEHGEGVRIRHALDSVPVYIDNTLALHVAGNRTYSSHVRHIALRYFFIR 147
            MS PSK  M   KHLLRYL G+ DF ITYK+G F LTA SDAN GN PDN  SMSS+I M+S APVSFK GLQ LTA ST+E ELVAAAL MKE++    ++ E G G   R    S P+YI NT  LHV GN+T+S   +H+ALR+F+IR
Sbjct:  501 MSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFR----SAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIR 646          
BLAST of mRNA_H-paniculata_contig25986.7090.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 3.600e-41
Identity = 89/151 (58.94%), Postives = 104/151 (68.87%), Query Frame = 0
Query:    1 MSKPSKARMAVTKHLLRYLIGTMDFVITYKQGSFKLTAFSDANCGNKPDNGNSMSSFIAMLSNAPVSFKVGLQGLTAQSTMEVELVAAALMMKESV----VLLEHGEGVRIRHALDSVPVYIDNTLALHVAGNRTYSSHVRHIALRYFFIR 147
            M+KPSK  M   K   RYL GT  F I YK+G FKLTAF+D+N GN PDNG S SS + ML +AP++FK GLQ LT QSTMEVELVAAAL +KE+V    +L E G G      L  VP+Y DNT  LH  GNR+YSS  +HIALR+FFIR
Sbjct:  530 MAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFG----KELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIR 676          
BLAST of mRNA_H-paniculata_contig25986.7090.1 vs. uniprot
Match: A0A6H5KCX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX7_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 3.670e-41
Identity = 77/135 (57.04%), Postives = 93/135 (68.89%), Query Frame = 0
Query:    9 MAVTKHLLRYLIGTMDFVITYKQGSFKLTAFSDANCGNKPDNGNSMSSFIAMLSNAPVSFKVGLQGLTAQSTMEVELVAAALMMKESVVLLEHGEGVRIRHALDSVPVYIDNTLALHVAGNRTYSSHVRHIALRY 143
            M   KH LRYL GT+DF ITYK+G FKL  FSD+N  N PDNG S SS++ ML+NAP+SF+ GLQGLTA STME ELVA+AL MKE+V        +        +PVY DNT  LH  GNR++SS  +HIALR+
Sbjct:    1 MVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRF 135          
BLAST of mRNA_H-paniculata_contig25986.7090.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 9.960e-40
Identity = 83/147 (56.46%), Postives = 98/147 (66.67%), Query Frame = 0
Query:    1 MSKPSKARMAVTKHLLRYLIGTMDFVITYKQGSFKLTAFSDANCGNKPDNGNSMSSFIAMLSNAPVSFKVGLQGLTAQSTMEVELVAAALMMKESVVLLEHGEGVRIRHALDSVPVYIDNTLALHVAGNRTYSSHVRHIALRYFFIR 147
            MSK +KA M   KHLLR   GT DF ITYK+G FKLTAFSDAN  + PDN  S SS++ M+S APVSFK GLQ LT  STME EL+AAAL MKE+V        +        VP+YI+NT  LHV GN+ YSS  +HIAL +F +R
Sbjct:  346 MSKAAKAHMGAAKHLLR---GTQDFCITYKRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVR 489          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25986.7090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMK0_9PHAE5.530e-4757.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE1.100e-4658.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE1.280e-4558.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE9.490e-4558.50Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNV2_9PHAE1.050e-4457.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH6_9PHAE1.210e-4357.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBU1_9PHAE2.540e-4259.60CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JG39_9PHAE3.600e-4158.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KCX7_9PHAE3.670e-4157.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J6N1_9PHAE9.960e-4056.46Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25986contigH-paniculata_contig25986:1096..1575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25986.7090.1mRNA_H-paniculata_contig25986.7090.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25986 68..3537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25986.7090.1 ID=prot_H-paniculata_contig25986.7090.1|Name=mRNA_H-paniculata_contig25986.7090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp
MSKPSKARMAVTKHLLRYLIGTMDFVITYKQGSFKLTAFSDANCGNKPDN
GNSMSSFIAMLSNAPVSFKVGLQGLTAQSTMEVELVAAALMMKESVVLLE
HGEGVRIRHALDSVPVYIDNTLALHVAGNRTYSSHVRHIALRYFFIRSWP
RRAESASTT*
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