prot_H-paniculata_contig2598.7085.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2598.7085.1
Unique Nameprot_H-paniculata_contig2598.7085.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length215
Homology
BLAST of mRNA_H-paniculata_contig2598.7085.1 vs. uniprot
Match: D7G130_ECTSI (Tudor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G130_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 2.060e-75
Identity = 143/215 (66.51%), Postives = 154/215 (71.63%), Query Frame = 0
Query:    1 MEDLQAKLTAYSQQLEQVKELEASDPDNAGFAKLRTDLEEVIRLTTGLLEEAKGSSALPPPGPPPS-ASEQSADAEPISLGKWEPVPAAPTGDAALPEDGSGGGGRXXXXXXXXGKDGLVXXXXXXXXXXXXXXXXVFGVGARVEVLSADKWYPAVIKSVSEDGQDFEVVYMGYGTEGTATITTLRQITRSPRPVSEAAAKPGLECRALYVGDGT 214
            M++LQ KLTAY+QQLEQV ELEASDP NAGF KLRTDLEEVIRLT GL+EEAKG+SALP P P  + AS  +   E + +GKWEPV AAP   A  P D    GG+           G  XX              VFGVGARVEVLSADKWYPAVI SVSEDGQDF V YMGYGTEGTATITTLRQITRSPRPV+ AAA  GLECRALYVGDGT
Sbjct:    1 MDELQEKLTAYTQQLEQVAELEASDPSNAGFTKLRTDLEEVIRLTKGLIEEAKGTSALPAPEPAAAPASSAAPKFEAVPIGKWEPV-AAP---APAPPDAPREGGK-----------GXXXXTAAVAAELGSSTTGVFGVGARVEVLSADKWYPAVIDSVSEDGQDFGVTYMGYGTEGTATITTLRQITRSPRPVAAAAAVKGLECRALYVGDGT 200          
BLAST of mRNA_H-paniculata_contig2598.7085.1 vs. uniprot
Match: A0A6H5JFR7_9PHAE (Tudor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR7_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 4.090e-73
Identity = 136/215 (63.26%), Postives = 148/215 (68.84%), Query Frame = 0
Query:    1 MEDLQAKLTAYSQQLEQVKELEASDPDNAGFAKLRTDLEEVIRLTTGLLEEAKGSSALPPPGPPPS-ASEQSADAEPISLGKWEPVPAAPTGDAALPEDGSGGGGRXXXXXXXXGKDGLVXXXXXXXXXXXXXXXXVFGVGARVEVLSADKWYPAVIKSVSEDGQDFEVVYMGYGTEGTATITTLRQITRSPRPVSEAAAKPGLECRALYVGDGT 214
            M++L+ KLTAY+QQLEQV ELEASDP NAGF KLRTDLEEVIRLT GLLEEAKG+SALP P P  + AS  +   E + +GKWEPV A          +G              G+ G                  VFGVGARVEVLSADKWYPAVI SVSEDGQDF V YMGYGTEGTATITTLRQITRSPRPV+ AAA  GLECRALYVGDGT
Sbjct:    1 MDELEEKLTAYTQQLEQVAELEASDPSNAGFTKLRTDLEEVIRLTKGLLEEAKGTSALPAPEPAAAPASSATPKLEAVPIGKWEPVAAXXXXXXXXXREGG-----------KKGRGGTTALAAKQGSSTTG----VFGVGARVEVLSADKWYPAVIDSVSEDGQDFGVTYMGYGTEGTATITTLRQITRSPRPVAAAAAVKGLECRALYVGDGT 200          
BLAST of mRNA_H-paniculata_contig2598.7085.1 vs. uniprot
Match: A0A1Y1HZF7_KLENI (Survival of motor neuron-related-splicing factor 30 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZF7_KLENI)

HSP 1 Score: 55.8 bits (133), Expect = 9.320e-6
Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    1 MEDLQAKLTAYSQQLEQVKELEASDPDNAGFAKLRTDLEEVIRLTTGLLEEAKG--SSALPPPGPPPSASEQSADAEPISLGKWEPVP 86
            +++L+  LT Y  QL+Q ++L ASDP N  +  +  DLEEVI LT  LL EA+   S+A P P  PPS +  +A    +++G  +P P
Sbjct:    4 IQELETNLTTYYAQLQQARQLAASDPSNEEYPTIVQDLEEVINLTADLLTEARSTASAAAPAPVVPPSQALTAA----LNVGVRKPEP 87          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2598.7085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G130_ECTSI2.060e-7566.51Tudor domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JFR7_9PHAE4.090e-7363.26Tudor domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A1Y1HZF7_KLENI9.320e-640.91Survival of motor neuron-related-splicing factor 3... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableGENE3D2.30.30.140coord: 133..190
e-value: 2.3E-8
score: 35.4
NoneNo IPR availablePANTHERPTHR13681:SF26SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30coord: 2..189
NoneNo IPR availablePANTHERPTHR13681FAMILY NOT NAMEDcoord: 2..189
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 147..188
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 134..194
score: 8.81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2598contigH-paniculata_contig2598:201..6905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2598.7085.1mRNA_H-paniculata_contig2598.7085.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2598 201..7298 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2598.7085.1 ID=prot_H-paniculata_contig2598.7085.1|Name=mRNA_H-paniculata_contig2598.7085.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=215bp
MEDLQAKLTAYSQQLEQVKELEASDPDNAGFAKLRTDLEEVIRLTTGLLE
EAKGSSALPPPGPPPSASEQSADAEPISLGKWEPVPAAPTGDAALPEDGS
GGGGRGWGGAGGGGKDGLVGAGSGGTGAGGANATGVFGVGARVEVLSADK
WYPAVIKSVSEDGQDFEVVYMGYGTEGTATITTLRQITRSPRPVSEAAAK
PGLECRALYVGDGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor