prot_H-paniculata_contig25969.7081.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25969.7081.1
Unique Nameprot_H-paniculata_contig25969.7081.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
[Close]
BLAST of mRNA_H-paniculata_contig25969.7081.1 vs. uniprot
Match: D7FXW2_ECTSI (Phosphotransferase system component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW2_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 4.880e-13
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 0 
Query:    6 QTFAAARDCGSPIVGTGGSSLGEAMAMGCLLVGSSGGSVATTNKSK 51
            + F AAR C +P+VGTGG+SLG A+AMGCLLVGSSGGSVATTNKSK
Sbjct:  371 EAFTAARGCRAPVVGTGGTSLGAALAMGCLLVGSSGGSVATTNKSK 416
[Close]
BLAST of mRNA_H-paniculata_contig25969.7081.1 vs. uniprot
Match: A0A6H5L9M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M4_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 6.670e-13
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0 
Query:    8 FAAARDCGSPIVGTGGSSLGEAMAMGCLLVGSSGGSVATTNKSK 51
            F AAR C +P+VGTGG+SLG A+AMGCLLVGSSGGSVATTNKSK
Sbjct:   78 FTAARGCRAPVVGTGGTSLGSALAMGCLLVGSSGGSVATTNKSK 121
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25969.7081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXW2_ECTSI4.880e-1378.26Phosphotransferase system component n=1 Tax=Ectoca... [more]
A0A6H5L9M4_9PHAE6.670e-1381.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25969contigH-paniculata_contig25969:177..329 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25969.7081.1mRNA_H-paniculata_contig25969.7081.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25969 177..329 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25969.7081.1 ID=prot_H-paniculata_contig25969.7081.1|Name=mRNA_H-paniculata_contig25969.7081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
PRFVRQTFAAARDCGSPIVGTGGSSLGEAMAMGCLLVGSSGGSVATTNKS
K
back to top