mRNA_H-paniculata_contig2593.7075.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2593.7075.1 vs. uniprot
Match: A0A835ZE95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE95_9STRA) HSP 1 Score: 241 bits (614), Expect = 2.800e-71 Identity = 118/218 (54.13%), Postives = 157/218 (72.02%), Query Frame = 3
Query: 918 DMADLKYALGAVCVFSFISAVGVGSAIGGNVGASFTYFFALLPIVFLAIGSTAPGIIIAVINNFRRKSKEDYEERRVRHEAAHFLAGYLCGLPIKSYRADGGTTLVEFYDSVDGDMGGRALKFTPEEVDKVSIVAMSGAVGEALVYEVATGGASDLDNLGQIMGQTNPPMDGPAQQSQARWATVMGHRLLTSHEPELNSLMKSFREGQSVGECVGALE 1571
++ DLKYALGAV FS ISAV G +GGN GAS TY FA++PI+FL IGS++PGII+A IN F+ + +++ RRV HEAAHFLAGYLCGLPIKSY DG TT +EF+D+ +GD + T E+D VS+VA++GAV E + ATG A DLD+LG++M +T+PPM AQ+ Q RWA + H+LL +E E ++L+ +F E +SV EC+ ALE
Sbjct: 2 NLDDLKYALGAVVAFSAISAVASGVIVGGNTGASLTYLFAIIPILFLGIGSSSPGIIVAAINLFKIRFDSEFQSRRVHHEAAHFLAGYLCGLPIKSYTVDGATTQIEFFDTAEGDQAVIGRQLTRPEIDPVSVVALAGAVAEVKKFGSATGSAQDLDSLGRLMNRTSPPMRDQAQEDQTRWAALTAHKLLGRYEKEFSALVTAFSEKKSVAECIAALE 219
BLAST of mRNA_H-paniculata_contig2593.7075.1 vs. uniprot
Match: D7FLX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX1_ECTSI) HSP 1 Score: 227 bits (578), Expect = 3.840e-67 Identity = 110/130 (84.62%), Postives = 122/130 (93.85%), Query Frame = 3
Query: 921 MADLKYALGAVCVFSFISAVGVGSAIGGNVGASFTYFFALLPIVFLAIGSTAPGIIIAVINNFRRKSKEDYEERRVRHEAAHFLAGYLCGLPIKSYRADGGTTLVEFYDSVDGDMGGRALKFTPEEVDKV 1310
M DLKYALG VC+FSF +AVGVG+AIGGNVGASFTYFFALLPIVFL IGSTAPG+I AVINN RRKS++DYEERRVRHEAAHFL+GYLCGLPIKSY+ADGGTTLVEFYDS +GDM GRA+KFTPEEVD++
Sbjct: 1 MDDLKYALGFVCIFSFAAAVGVGAAIGGNVGASFTYFFALLPIVFLGIGSTAPGVITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTLVEFYDSAEGDMSGRAMKFTPEEVDQL 130
BLAST of mRNA_H-paniculata_contig2593.7075.1 vs. uniprot
Match: A0A7S3UVY9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVY9_HETAK) HSP 1 Score: 219 bits (557), Expect = 1.100e-60 Identity = 120/275 (43.64%), Postives = 174/275 (63.27%), Query Frame = 3
Query: 774 VEIMDKLKNDGLAPRWKSFDFGARYPVSQGQLKIQTGLDGKNLAA-DGGDMADLKYALGAVCVFSFISAVGVGSAIGGNVGASFTYFFALLPIVFLAIGSTAPGIIIAVINNFRRKSKEDYEERRVRHEAAHFLAGYLCGLPIKSYRADGGTTLVEFYDSVDGD-----MGGRALKFTPEEVDKVSIVAMSGAVGEALVYEVATGGASDLDNLGQIMGQTNPPMDGPAQQSQARWATVMGHRLLTSHEPELNSLMKSFREGQSVGECVGALEGAR 1580
+E + LK DG+ WKS + + Y V+ G++ TG++GK+L+ +GG+ DL+++L VC+ SFI A G G IGGNVGA+ TY FA++PI+FL +GSTAPGII + I F+ + D+ ERR+RHEAAHFL GY G PI+SY ++G VEFYD+ GD ALK E+++ +++VAMSGAVGE L + A GG +DL L + +T P + Q S RW V H++LT + +L+++FRE +SV EC+ +E +
Sbjct: 132 LEALGGLKADGVVNTWKSKEVTS-YAVTIGRMTSATGIEGKDLSPLEGGNEDDLRWSLVVVCLGSFILAAGSGIVIGGNVGATLTYLFAVIPILFLGVGSTAPGIITSAIEGFKTNTDSDFNERRIRHEAAHFLVGYALGFPIRSYTSEGPACEVEFYDTPAGDDFAAARTAEALK--KEQLEPLAVVAMSGAVGECLEFGNARGGQNDLVALQTLFTRTRPYVRADEQMSLTRWGVVEAHKVLTQNRAAYEALVQAFREKRSVQECIAIIESTK 403
BLAST of mRNA_H-paniculata_contig2593.7075.1 vs. uniprot
Match: A0A7S2V1Y0_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Y0_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.850e-53 Identity = 115/283 (40.64%), Postives = 169/283 (59.72%), Query Frame = 3
Query: 741 LAELPDDSKSVVEIMDKLKNDGLAPRWKSFDFGARYPVSQGQLKIQTGLDGKNLAAD-GGDMADLKYALGAVCVFSFISAVGVGSAIGGNVGASFTYFFALLPIVFLAIGSTAPGIIIAVINNFRRKSKEDYEERRVRHEAAHFLAGYLCGLPIKSYRADGGTTLVEFYDSVDGD--MGGRALKFTPEEVDKVSIVAMSGAVGEALVYEVATGGASDLDNLGQIMGQTNPPMDGPAQQSQARWATVMGHRLLTSHEPELNSLMKSFREGQSVGECVGALEGAR 1580
LA+L M +K +G+ W S R V+ + QTG+ G +L AD + DLK+++ V + SF AV G IGGNVGA+ TY FA++PI+FL +GSTAPG+I A I+ + ++ ++ERRVRHEAAHFL GYL G PIKSY+A G T VEFYDSVDGD + + T E+V +++++M+G GE L Y A GG +DL++L + + NP + QQ R V +++L E ++++SFR ++V EC+ A+E ++
Sbjct: 107 LAKLDAVEGETFGTMVNMKEEGMITMWGSEVAECRR-VNMISMTSQTGIRGADLGADTSSTLDDLKFSILYVTMGSFALAVLSGIVIGGNVGATLTYLFAVIPILFLGVGSTAPGLISAGIDAVKSRADPTFDERRVRHEAAHFLVGYLLGYPIKSYKASGSTNEVEFYDSVDGDDYIANPGAQLTKEQVAPLAVISMAGIAGECLKYGDAKGGQADLNDLQSFLSRVNPYIRSDEQQDITRGGLVAAYKMLKDCSSEYEAVVESFRTKKAVNECIAAIETSK 388
BLAST of mRNA_H-paniculata_contig2593.7075.1 vs. uniprot
Match: A0A7S2C0S6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0S6_9STRA) HSP 1 Score: 192 bits (488), Expect = 5.600e-52 Identity = 122/294 (41.50%), Postives = 161/294 (54.76%), Query Frame = 3
Query: 714 ETRTALISTLAELPD-DSKSVVEIMDKLKNDGLAPRWKSFDFGARYPVSQGQLKIQTGLDGKNLAADGGDMAD-LKYALGAVCVFSFISAVGVGSAIGGNVGASFTYFFALLPIVFLAIGSTAPGIIIAVINNFRRKSKEDYEERRVRHEAAHFLAGYLCGLPIKSYRADGGTTLVEFYDSVDGDMGGRA---LKFTPEEVDKVSIVAMSGAVGEALVYEVATGGASDLDNLGQIMGQTNPPMDGPAQQSQARWATVMGHRLLTSHEPELNSLMKSFREGQSVGECVGALEGAR 1580
E + LIS E D+ V +D LK G W + GQL+ + GLD L D D LK AL AV FS I AV G +GGN GA+ TY FA+LPI+FL +GSTAPG+I AVI + + Y ERR++HEAAHFL GYLCG+PI+ Y DG V YD+ G + RA ++ T +E + +S+VAMSGAV E A GG DL+ L +I+ + +PP+ Q Q RWA RLL +H+ SL+ + + SV EC+ LE A+
Sbjct: 15 EIQQKLISVAIEAKSADAAEQVATLDALKESGDLRLWGVSQAPTFKATNIGQLQREYGLDAITLGLAAEDSLDELKAALFAVTAFSSIMAVLSGVVVGGNAGATLTYLFAVLPIIFLGVGSTAPGLISAVIEVGKTRLDPKYGERRIKHEAAHFLMGYLCGVPIQGYDVDGALPEVTLYDTRKGALT-RAPMDMRLTRDEANGLSVVAMSGAVAEVNAMGDAKGGQQDLELLNKILQRVDPPLSPDQMQQQTRWAAAEAARLLKTHDGAYQSLVGALEQKCSVAECIAKLETAK 307
BLAST of mRNA_H-paniculata_contig2593.7075.1 vs. uniprot
Match: A0A7S3V807_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V807_9STRA) HSP 1 Score: 176 bits (447), Expect = 4.250e-45 Identity = 133/364 (36.54%), Postives = 192/364 (52.75%), Query Frame = 3
Query: 546 AAARAEAEELEIKYRKEQGLPDFVPSGAKVSSVGGEAAAEAEVSEQPIPVVLKSTAETRTALISTLAELPDDSKSVVEIMDKLKNDGLAPRWKSFDFGA----------RYPVSQGQLKIQTGLDGKNLAA-------DGGDMADLKYALGAVCVFSFISAVGVGSAIGGNVGASFTYFFALLPIVFLAIGSTAPGIIIAVINNFR--RKSKEDYEERRVRHEAAHFLAGYLCGLPIKSYRA-DGGTTLVEFYDSVDGDMGGRALKFTPEEVDKVSIVAMSGAVGEALVYEVATGGASDLDNLGQIMGQTNPPMDGPAQQSQARWATVMGHRLLTSHEPELNSLMKSFREGQSVGECVGALEGA 1577
AA RA+A+++ K++ G +VS V +A EV ++ IPV+ S + A I+ A D S VE M L + W + + YPVS L+ +TG GK A D + D KYA V S ++ + + + N GA+F Y FAL+PI+FLA+GS+APGII I F+ + K E+R RHEA HFL GYLCGLPIKSY+A D G VEFY + DG+ GR L+ +E+ +S+VAMSG+V E L + A GG+SDL L + +T M AQQ RW + +++S+E + + L+ +F+ +SV EC+ A+E +
Sbjct: 65 AALRAKAQKM-----KDEAAQLEKDLGREVSDVKPKA----EVVKE-IPVLSSSEVKDTVANINFEA---GDYASQVEAMTSLYDSNKLGLWSAARTSSVNTKSPAPLRPYPVSLNFLEQRTG--GKITATTLGVGQEDDVSLEDFKYATLWVTGGSTVAGIASLALLPENTGATFCYIFALIPILFLAVGSSAPGIIAGAIKGFKENKDDKAAQEDRICRHEAGHFLCGYLCGLPIKSYQANDSGIPCVEFYPTTDGNFAGRELE--EQEICAMSVVAMSGSVAEVLEFGEAKGGSSDLIQLNGLFSRTKDFMGAQAQQDMTRWGAYTAYNIISSNEDKFDRLVAAFKSKKSVTECIAAIEAS 411
BLAST of mRNA_H-paniculata_contig2593.7075.1 vs. uniprot
Match: A0A7S1JCN1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JCN1_9EUGL) HSP 1 Score: 170 bits (430), Expect = 5.050e-42 Identity = 103/255 (40.39%), Postives = 147/255 (57.65%), Query Frame = 3
Query: 849 PVSQGQLKIQTGLDGKNLAADGGDMADL----KYALGAVCVFSFISAVGVGSAIGGNVGASFTYFFALLPIVFLAIGSTAPGIIIAVINNFR--RKSKEDYEE-----RRVRHEAAHFLAGYLCGLPIKSYRADGGTTLVEFYDSVDGDMGGRALKFTPEEVDKVSIVAMSGAVGEALVYEVATGGASDLDNLGQIMGQTNPPMDGPAQQSQARWATVMGHRLLTSHEPELNSLMKSFREGQSVGECVGALEGAR 1580
PVS +L+ + GLD L ADL Y +G FS ++ V +G+ +GGN GAS Y A +P++FLAIGS APGII+ +I+ + K + RRVRHEAAHFL GYL GLP+ Y + T+ VEF+ + +G++ + T E+DK+S++A+SGAVGEAL + ATGG DL L +++ M Q+ Q RW + LL ++PE +L K+F E +S+ EC+ LE AR
Sbjct: 246 PVSMQELE-RVGLDAYKLGIVE-SQADLDTVQNYTIGVFAAFSLLAVV-LGAGVGGNTGASLAYVTAAIPLIFLAIGSVAPGIIVGLISQIEGGKDGKGGNVDSAGINRRVRHEAAHFLVGYLLGLPVAGYEVETNTSCVEFHPTTNGEIVPNQ-RLTKAEIDKLSVIALSGAVGEALTFSNATGGGQDLQLLQRLLLICEERMTRAKQEDQTRWGALSARMLLRQYDPEYQALCKAFAEKKSIPECMAILETAR 496
BLAST of mRNA_H-paniculata_contig2593.7075.1 vs. uniprot
Match: A0A7S2KN54_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KN54_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.650e-41 Identity = 109/302 (36.09%), Postives = 169/302 (55.96%), Query Frame = 3
Query: 726 ALISTLAELPDDSKSVVEIMDKLKNDGLAPRWKS-----------FDFGARYPVSQGQLKIQTG--LDGKNLAADGG---DMADLKYALGAVCVFSFISAVGVGSAIGGNVGASFTYFFALLPIVFLAIGSTAPGIIIAVINNFRRKS--KEDYEERRVRHEAAHFLAGYLCGLPIKSYR-ADGGTTLVEFYDSVDGDMGGRALKFTPEEVDKVSIVAMSGAVGEALVYEVATGGASDLDNLGQIMGQTNPPMDGPAQQSQARWATVMGHRLLTSHEPELNSLMKSFREGQSVGECVGALEG 1574
+L ++A D+ + VE +D L + G WK F YPVS L+ ++G L+GK+L DG ++ D K A AV + S ++A+ + + NVGA+ Y FAL+P+ F+A+GS+APG I A I + ++ KE E+R RHEAAHFL GY+CGLP+K Y D G VEF++S +G + R +F+ EE+ +++VAMSG+V EA+ + A GG +DL L ++ + QQ RW + +++L + SL+++F+ +SV ECV +EG
Sbjct: 90 SLTGSVAFEGGDATAQVEKLDSLVSTGEFSMWKKATREQSNSSGMFRSLRPYPVSLNMLEQRSGDLLNGKSLGVDGEMDVNLNDFKDATIAVTLGSTVAAIASLAFLPENVGATVCYLFALIPVGFIAVGSSAPGAIAAAIVAAKGEADDKEAREDRICRHEAAHFLCGYMCGLPVKEYSITDNGFPCVEFHESSEGKIINR--EFSSEEIAALAVVAMSGSVAEAIKFSQARGGGNDLLQLENFFRRSADFIGAAKQQDLTRWGALASYQILRDYSSTFESLVEAFKVKKSVSECVAIVEG 389
BLAST of mRNA_H-paniculata_contig2593.7075.1 vs. uniprot
Match: A0A0G4GRU2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GRU2_VITBC) HSP 1 Score: 166 bits (419), Expect = 4.280e-41 Identity = 114/363 (31.40%), Postives = 186/363 (51.24%), Query Frame = 3
Query: 498 ASNDVKDMTERLLKQAAAARAEAEELEIKYRKEQGLPDFVPSGAKVSSVGGEAAAEAEVSEQPIPVVLKSTAETR--TALISTLAELPDDSK-SVVEIMDKLKNDGLAPRWKSFDFGARYPVSQGQLKIQTGLDGKNLAADGGDMADLKYALGAVCVFSFISAVGVGSAIGGNVGASFTYFFALLPIVFLAIGSTAPGIIIAVINNFRRKSKEDYEERRVRHEAAHFLAGYLCGLPIKSYRADGGTTLVEFYDSVDGDMGGRALKFTPEEVDKVSIVAMSGAVGEALVYEVATGGASDLDNLGQIMGQTNPPMDGPAQQSQARWATVMGHRLLTSHEPELNSLMKSFREGQSVGECVGALEGA 1577
AS+D D+ ++LL++AA R EA +E++ K+ D + + +AA + + Q AE R T+ ++++ +LP DS + +D+LK G+ W S + Y V K TG D + + G+ + + S + A+G IGGN+GA FTY FA LPIV +AIGS PG+++ + N + + ++ERR HEA+HFL GYL G P + T+LVEFY+S D D R ++ + +VA+SG GE L Y+ A D++ + +M +T P + G Q S RW+++ +++L H+P ++ L + G + EC+ +E A
Sbjct: 50 ASSDDADV-QKLLEEAAKLREEASAMEVQKAKD----DEADRQRQEAEAAKQAAMKPADAPQTNAAAAPPPAEARLLTSPVASVPKLPLDSAVACATKLDELKEQGVIGYWNSEARPSYYNVESYTWKASTGCDDNAIQSKSGETDFFQRLFVGTLIVSTLLAIGSSQFIGGNLGALFTYLFAALPIVVVAIGSINPGVLLGLYTNVQNAADGSFKERRRWHEASHFLVGYLLGYPPRRVVKAPETSLVEFYESRD-DSQDRRQPLERSTLEPLCVVAISGISGELLKYKTAKDTDVDINYIQNLMKRTQPQLSGGQQTSIPRWSSLAAYQILEKHQPVVDELAGAMGGGADISECIRVVENA 406
BLAST of mRNA_H-paniculata_contig2593.7075.1 vs. uniprot
Match: A0A7S4MBA1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBA1_9STRA) HSP 1 Score: 164 bits (416), Expect = 6.640e-41 Identity = 112/335 (33.43%), Postives = 180/335 (53.73%), Query Frame = 3
Query: 621 SGAKVSSVGGEAAAEAEVSEQPIPVVLKSTAETRTALISTLAELPDDSKSVVEIMDKLKNDGLAPRWKSFDFGAR----------YPVSQGQLKIQTG--LDGKNLAADGG---DMADLKYALGAVCVFSFISAVGVGSAIGGNVGASFTYFFALLPIVFLAIGSTAPGIIIAVINNFRRKSKEDYE--ERRVRHEAAHFLAGYLCGLPIKSYR-ADGGTTLVEFYDSVDGDMGGRALKFTPEEVDKVSIVAMSGAVGEALVYEVATGGASDLDNLGQIMGQTNPPMDGPAQQSQARWATVMGHRLLTSHEPELNSLMKSFREGQSVGECVGALE 1571
+ A +G + ++ V+ + P + + ++L S++ D+ S +D + G WK+ GA YPVS L+ ++G L G++L G + D K A AV + S ++A+ + + NVGA+ Y FAL+P+ F+ IGSTAPGII I++F+ S + + +R RHEA HFL GYLCGLP+K Y D G VEF+ S +G+ GR +FT EE+ +S+VAMSG+V E L + A GG +DL L +M ++ + +Q RW + L+ ++ + +L+++F+E +SV +CV A+E
Sbjct: 71 AAALAKEMGKDIETDSAVATKATPTKSGLSKDEASSLSSSVDFDGGDASSQAASLDAIVESGDFALWKAAATGAAGTSSQAPLRPYPVSLNFLEQRSGGKLTGESLGVSGEMDVSLDDFKDATIAVTLGSTVAAIASLALLPENVGATLCYLFALIPVGFIGIGSTAPGIIAGAISSFQGTSDDQAQRDDRICRHEAGHFLCGYLCGLPVKQYSIVDTGFPCVEFHPSAEGEALGR--EFTSEEIAALSVVAMSGSVAEVLSFGQARGGENDLLELNGLMRRSKEFIGAQKEQDLTRWGALAAFNLIQANMDKYEALVQAFKEKKSVADCVAAIE 403 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2593.7075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2593.7075.1 >prot_H-paniculata_contig2593.7075.1 ID=prot_H-paniculata_contig2593.7075.1|Name=mRNA_H-paniculata_contig2593.7075.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=474bp MFMSEITSRGERCPYKNRRFHVTQEKNCRSLLHFASSPMVLSSTVGFVGSback to top mRNA from alignment at H-paniculata_contig2593:1286..10372- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2593.7075.1 ID=mRNA_H-paniculata_contig2593.7075.1|Name=mRNA_H-paniculata_contig2593.7075.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9087bp|location=Sequence derived from alignment at H-paniculata_contig2593:1286..10372- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2593:1286..10372- >mRNA_H-paniculata_contig2593.7075.1 ID=mRNA_H-paniculata_contig2593.7075.1|Name=mRNA_H-paniculata_contig2593.7075.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2844bp|location=Sequence derived from alignment at H-paniculata_contig2593:1286..10372- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |