prot_H-paniculata_contig25921.7072.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25921.7072.1
Unique Nameprot_H-paniculata_contig25921.7072.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length71
Homology
BLAST of mRNA_H-paniculata_contig25921.7072.1 vs. uniprot
Match: D7G810_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G810_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.080e-19
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    1 MAPVFDELAKEQKGSA-VFCKVDIDDLPEAFDGMSIPAFHVLKGGQKVEAVNGMNEERLRSMVAKH 65
            MAP+F+ LAKE KG+A VF KVDID+LPE FDG SIPAF+V K G KV++V G  E +LR +VA H
Sbjct:   82 MAPIFEGLAKENKGAAAVFAKVDIDNLPETFDGTSIPAFYVFKNGVKVDSVTGSGESKLRKLVADH 147          
BLAST of mRNA_H-paniculata_contig25921.7072.1 vs. uniprot
Match: A0A7S2ISI8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2ISI8_9EUKA)

HSP 1 Score: 62.0 bits (149), Expect = 4.710e-10
Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    3 PVFDELAKEQKGSAVFCKVDIDDLPE---AFDGMSIPAFHVLKGGQKVEAVNGMNEERLRSMVAKH 65
            P F ELA+E KGSA+F KVD+D+L E   A + M++P FH  K G K ++++G N E+L + V K+
Sbjct:  131 PRFAELAREHKGSALFVKVDVDELEEVAQAAEIMAMPTFHFYKKGTKADSMSGANNEKLTATVKKN 196          
BLAST of mRNA_H-paniculata_contig25921.7072.1 vs. uniprot
Match: A0A2R5GP11_9STRA (Thioredoxin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GP11_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.770e-9
Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    1 MAPVFDELAKE---QKGSAVFCKVDIDDLPEAFDGMSI---PAFHVLKGGQKVEAVNGMNEERLRSMVAKHCK 67
            +APVF EL  E    K SA F ++D+D+L E    + +   P F V K G +V+ + G +E++LR++VAKHCK
Sbjct:  123 IAPVFKELCAEVNAAKNSAKFVEIDVDELDEVSADVKVSAMPTFVVFKNGSEVDRLMGAHEDKLRALVAKHCK 195          
BLAST of mRNA_H-paniculata_contig25921.7072.1 vs. uniprot
Match: A0A2H2JHI5_CAEJA (Thioredoxin domain-containing protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2JHI5_CAEJA)

HSP 1 Score: 57.8 bits (138), Expect = 4.920e-9
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 0
Query:    1 MAPVFDELAKEQKGSAVFCKVDIDDLP---EAFDGMSIPAFHVLKGGQKVEAVNGMNEERLRSMVAKH 65
            +APVFD+LA + KGS VF KVD+D+     +++   ++P F    GGQK   + G +E  LRSMVAK+
Sbjct:   39 IAPVFDDLANQYKGS-VFLKVDVDECSGTAQSYGVNAMPTFMAFVGGQKKATIQGADESGLRSMVAKY 105          
BLAST of mRNA_H-paniculata_contig25921.7072.1 vs. uniprot
Match: A0A087HPP0_ARAAL (Thioredoxin domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HPP0_ARAAL)

HSP 1 Score: 55.8 bits (133), Expect = 2.780e-8
Identity = 28/68 (41.18%), Postives = 44/68 (64.71%), Query Frame = 0
Query:    1 MAPVFDELAKEQKGSAVFCKVDIDDLPEA---FDGMSIPAFHVLKGGQKVEAVNGMNEERLRSMVAKH 65
            +APVF +LAK+   +A+F KVDID+L      FD  ++P F  +K GQ V+ + G  ++ L++M+ KH
Sbjct:   46 IAPVFTDLAKKFMSTAIFFKVDIDELQSVAKEFDVEAMPTFVFIKAGQVVDKLVGARKDDLQAMIVKH 113          
BLAST of mRNA_H-paniculata_contig25921.7072.1 vs. uniprot
Match: A0A2H2IFH2_CAEJA (Thioredoxin domain-containing protein n=2 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2IFH2_CAEJA)

HSP 1 Score: 57.8 bits (138), Expect = 3.160e-8
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 0
Query:    1 MAPVFDELAKEQKGSAVFCKVDIDDLP---EAFDGMSIPAFHVLKGGQKVEAVNGMNEERLRSMVAKH 65
            +APVFD+LA + KGS VF KVD+D+     +++   ++P F    GGQK   + G +E  LRSMVAK+
Sbjct:   39 IAPVFDDLANQYKGS-VFLKVDVDECSGTAQSYGVNAMPTFMAFVGGQKKATIQGADESGLRSMVAKY 105          
BLAST of mRNA_H-paniculata_contig25921.7072.1 vs. uniprot
Match: TRXH4_ARATH (Thioredoxin H4 n=14 Tax=Brassicaceae TaxID=3700 RepID=TRXH4_ARATH)

HSP 1 Score: 54.3 bits (129), Expect = 1.110e-7
Identity = 26/68 (38.24%), Postives = 44/68 (64.71%), Query Frame = 0
Query:    1 MAPVFDELAKEQKGSAVFCKVDIDDLPEA---FDGMSIPAFHVLKGGQKVEAVNGMNEERLRSMVAKH 65
            +AP+F++LAK+   SA+F KVD+D+L      F   ++P F  +K G+ V+ + G N+E L++ + KH
Sbjct:   46 IAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113          
BLAST of mRNA_H-paniculata_contig25921.7072.1 vs. uniprot
Match: D0NCN3_PHYIT (Thioredoxin H-type n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NCN3_PHYIT)

HSP 1 Score: 56.2 bits (134), Expect = 1.300e-7
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    1 MAPVFDELAKEQKGSAVFCKVDIDDLP---EAFDGMSIPAFHVLKGGQKVEAVNGMNEERLRSMVAKHCK 67
            +AP F+EL+     SAVF +VD+D+L    E F+  S+P+F V KGG+ V+ ++G     L SM+AKH K
Sbjct:  202 IAPFFEELSARFP-SAVFARVDVDELESVAEDFNVSSLPSFKVFKGGKVVDELSGAIRSALESMIAKHAK 270          
BLAST of mRNA_H-paniculata_contig25921.7072.1 vs. uniprot
Match: A0A7S3F7U7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F7U7_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 2.020e-7
Identity = 29/67 (43.28%), Postives = 37/67 (55.22%), Query Frame = 0
Query:    1 MAPVFDELAKEQKGSAVFCKVDIDDLPEAFDGMSI---PAFHVLKGGQKVEAVNGMNEERLRSMVAK 64
            +AP F ELA +   SA+F KVD+D+L E   G  +   P F V KGG+ V+   G  E  L  MV K
Sbjct:  130 IAPFFGELASKHASSALFVKVDVDELEEVSQGCGVAAMPTFQVYKGGKCVDKCTGARENALADMVIK 196          
BLAST of mRNA_H-paniculata_contig25921.7072.1 vs. uniprot
Match: TRXH2_BRANA (Thioredoxin H-type 2 n=5 Tax=Brassiceae TaxID=981071 RepID=TRXH2_BRANA)

HSP 1 Score: 53.5 bits (127), Expect = 2.210e-7
Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 0
Query:    1 MAPVFDELAKEQKGSAVFCKVDIDDLP---EAFDGMSIPAFHVLKGGQKVEAVNGMNEERLRSMVAKH 65
            +APVF +LAK+   SA+F KVD+D+L    + F   ++P F ++K G  V+ V G  +E L + +AKH
Sbjct:   46 IAPVFADLAKKFMSSAIFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKH 113          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25921.7072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7G810_ECTSI1.080e-1963.64Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A7S2ISI8_9EUKA4.710e-1046.97Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A2R5GP11_9STRA4.770e-942.47Thioredoxin n=1 Tax=Hondaea fermentalgiana TaxID=2... [more]
A0A2H2JHI5_CAEJA4.920e-945.59Thioredoxin domain-containing protein n=1 Tax=Caen... [more]
A0A087HPP0_ARAAL2.780e-841.18Thioredoxin domain-containing protein n=1 Tax=Arab... [more]
A0A2H2IFH2_CAEJA3.160e-845.59Thioredoxin domain-containing protein n=2 Tax=Caen... [more]
TRXH4_ARATH1.110e-738.24Thioredoxin H4 n=14 Tax=Brassicaceae TaxID=3700 Re... [more]
D0NCN3_PHYIT1.300e-744.29Thioredoxin H-type n=1 Tax=Phytophthora infestans ... [more]
A0A7S3F7U7_9EUKA2.020e-743.28Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
TRXH2_BRANA2.210e-741.18Thioredoxin H-type 2 n=5 Tax=Brassiceae TaxID=9810... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 1..63
e-value: 2.4E-8
score: 33.9
NoneNo IPR availableGENE3D3.40.30.10coord: 1..70
e-value: 6.7E-12
score: 47.0
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 1..65
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 1..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25921contigH-paniculata_contig25921:1246..2170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25921.7072.1mRNA_H-paniculata_contig25921.7072.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25921 238..2970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25921.7072.1 ID=prot_H-paniculata_contig25921.7072.1|Name=mRNA_H-paniculata_contig25921.7072.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp
MAPVFDELAKEQKGSAVFCKVDIDDLPEAFDGMSIPAFHVLKGGQKVEAV
NGMNEERLRSMVAKHCKKAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf