mRNA_H-paniculata_contig2591.7064.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2591.7064.1 vs. uniprot
Match: D8LQF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQF5_ECTSI) HSP 1 Score: 241 bits (616), Expect = 2.800e-74 Identity = 114/149 (76.51%), Postives = 131/149 (87.92%), Query Frame = 3
Query: 276 ARFGGGVQSLAATLPVDLAGKERLEKFIDDCALLGPIRFVSMNDGAILESVGSFDNLRYSDQPKGRYATVSEGSGFECHLNMDKIKSITMVTKKSPMGEHDLYITRFLDEDGGTVLSAMLHGLDGSYEPGAADYWEKLRETFGAEQSVA 722
AR GVQ L+A++P DL G+ERLEKF+ DCALLGP RFVS+ DGAILE+VGSFDNLRY+D PKGRYATVSEG GFECHLN DK+KSI MVTK+SP G DLYITRFLDE+G T+LSAMLHG+DG+YEPGAADYW+KLR+TFG +QSVA
Sbjct: 57 ARKARGVQGLSASIPSDLKGRERLEKFLGDCALLGPTRFVSVTDGAILEAVGSFDNLRYTDLPKGRYATVSEGKGFECHLNCDKVKSIKMVTKQSPGGSFDLYITRFLDEEGNTLLSAMLHGVDGAYEPGAADYWDKLRKTFGEDQSVA 205
BLAST of mRNA_H-paniculata_contig2591.7064.1 vs. uniprot
Match: A0A835YGN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGN4_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.180e-53 Identity = 91/157 (57.96%), Postives = 115/157 (73.25%), Query Frame = 3
Query: 252 AVVLPPRRARFGGGVQSLAATLPVDLAGKERLEKFIDDCALLGPIRFVSMNDGAILESVGSFDNLRYSDQPKGRYATVS-EGSGFECHLNMDKIKSITMVTKKSPMGEHDLYITRFLDEDGGTVLSAMLHGLDGSYEPGAADYWEKLRETFGAEQSV 719
A+ P R R ++ + T+ +DL GKERL+K++ DC LLGP+RFVSMNDGAILE+VGSF+NLR++D KG YAT+S + GFECHLN+D++ ITM+TK + HDLYITRF+D +G TVLSAML G YE GA YW KLRE FGAEQ +
Sbjct: 24 ALTAPSRHLRAASALRMM--TVSIDLKGKERLQKYLKDCELLGPVRFVSMNDGAILEAVGSFENLRFNDLEKGTYATLSGDDEGFECHLNIDRVNGITMLTKPAKDASHDLYITRFVDAEGKTVLSAMLQAEGGQYEEGAVAYWTKLREAFGAEQKL 178
BLAST of mRNA_H-paniculata_contig2591.7064.1 vs. uniprot
Match: A0A6U1NZN9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NZN9_9STRA) HSP 1 Score: 139 bits (349), Expect = 5.400e-35 Identity = 70/145 (48.28%), Postives = 97/145 (66.90%), Query Frame = 3
Query: 291 GVQSLAATLPVDLAGKERLEKFIDDCALLGPIRFVSMNDGAILESVGSFDNLRYSDQPKGRYATVSEGS-GFECHLNMDKIKSITMVTKKSPMGEHDLYITRFLDEDGGTVLSAMLHGLD-GSYEPGAADYWEKLRETFGAEQSV 719
G +L AT L G RLEKF D +LLG +RFV + DGAILE+VGS++N++ +D KG++AT FECH+NMD++ ITM TK + G+ LYITRF D +LS+MLH + G+YE G+ ++WE+LRE FG +Q +
Sbjct: 54 GSCALEATSVDGLEGIPRLEKFFQDSSLLGAVRFVVVTDGAILETVGSYENMKINDLDKGKFATFKNSDKSFECHVNMDEVAKITMSTKNAKQGDRILYITRFYDNADKLILSSMLHPEEEGNYEDGSVEWWEQLREVFGEDQRL 198
BLAST of mRNA_H-paniculata_contig2591.7064.1 vs. uniprot
Match: I2CRE5_NANGC (Heme utilization protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRE5_NANGC) HSP 1 Score: 129 bits (323), Expect = 2.090e-31 Identity = 68/155 (43.87%), Postives = 96/155 (61.94%), Query Frame = 3
Query: 261 LPPRRARFGGGVQSLAATLPVDLAGKERLEKFIDDCALLGPIRFVSMNDGAILESVGSFDNLRYSDQP-KGRYAT-VSEGSGFECHLNMDKIKSITMVTKKSPMGEHDLYITRFLDEDGGTVLSAMLHGLDGSYEPGAADYWEKLRETFGAEQSV 719
+P R+ GG +S DL GKERL++F++D + LGPIRFV MNDG ILE+VGSF+N+ D P +G AT S+ FE HLN+D + + M + G+HD YI RF+ +G T+LS+MLH + +Y+ A +W KL+ FG Q +
Sbjct: 37 VPSPLIRWTGGEESNVG----DLVGKERLKRFLEDASFLGPIRFVCMNDGGILEAVGSFENMVSKDVPGRGELATFASDDKTFEAHLNLDMVSRVEMRQAVAKRGDHDNYIIRFISGEGKTLLSSMLHREEEAYDEDALAWWGKLKGVFGETQEM 187
BLAST of mRNA_H-paniculata_contig2591.7064.1 vs. uniprot
Match: A0A7S3X2R9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X2R9_9SPIT) HSP 1 Score: 122 bits (306), Expect = 4.020e-29 Identity = 61/132 (46.21%), Postives = 84/132 (63.64%), Query Frame = 3
Query: 309 ATLPVDLAGKERLEKFIDDCALLGPIRFVSMNDGAILESVGSFDNLRYSDQPKGRYATVSEGSGFECHLNMDKIKSITMVTKKSPMGEHDLYITRFLDEDGGTVLSAMLHGLDGSYEPGAADYWEKLRETFG 704
A+LPV AG + +F+ D LGP RFV +GAILE+VG+FD+LR S+ P G ATVS FECH+ ++K+ T VTK+ G+ LYI R LD D ++LS +LH YE GA ++W +L++ FG
Sbjct: 33 ASLPVMAAGPVGIRRFLGDLEFLGPCRFVVQGNGAILEAVGAFDDLRVSNTPNGMLATVSVEKDFECHIKTWQVKAATFVTKEGAEGKQ-LYIVRLLDADDTSLLSVILHSGSDGYEEGAVEFWNQLKDRFG 163
BLAST of mRNA_H-paniculata_contig2591.7064.1 vs. uniprot
Match: A0A7S3EQ46_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EQ46_9EUKA) HSP 1 Score: 122 bits (305), Expect = 4.980e-29 Identity = 66/149 (44.30%), Postives = 91/149 (61.07%), Query Frame = 3
Query: 264 PPRRARFGGGVQSLAATLPVDLAGKERLEKFIDDCALLGPIRFVSMNDGAILESVGSFDNLRYSDQP-KGRYATVS-EGSGFECHLNMDKIKSITMVTKKSPMGEHDLYITRFLDEDGGTVLSAMLHGLDGSYEPGAADYWEKLRETFG 704
P R G Q L+ + A + +F+ D LGP+RFV GAILE+VGSF+NLR + P KG ATVS E + FECH+ ++K+ V+K++ G+ +YI R L +G ++LSA+LH DGSYE GA D+WE LR+ FG
Sbjct: 16 PSLRIHSGVMQQPLSCVRCAETAAPVAIGRFLRDLEFLGPVRFVVQGPGAILEAVGSFENLRIKEIPGKGPLATVSDEDNAFECHVRCGEVKTAQFVSKET--GDRTMYIIRLLSNEGDSLLSAILHAEDGSYEEGAVDFWEGLRDRFG 162
BLAST of mRNA_H-paniculata_contig2591.7064.1 vs. uniprot
Match: A0A7S3RZZ8_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RZZ8_EMIHU) HSP 1 Score: 122 bits (306), Expect = 5.620e-29 Identity = 59/122 (48.36%), Postives = 82/122 (67.21%), Query Frame = 3
Query: 354 FIDDCALLGPIRFVSMNDGAILESVGSFDNLRYSDQPKGRYATVSEGSGFECHLNMDKIKSITMVTKKSPMGEHDLYITRFLDEDGGTVLSAMLHGLDGSYEPGAADYWEKLRETFGAEQSV 719
F+ D LGP RFV +GAILE+VG+F+ LR S+ PKG ATVS G FECH+ + ++ S + V+K+ P G+ L+I R LD++GG +LSA+LH YE GA ++E+LRE FGA +
Sbjct: 60 FLSDLEFLGPCRFVVQGEGAILEAVGAFEELRVSETPKGALATVSVGDSFECHVRLKEVASASFVSKEKPDGKA-LHIVRLLDKEGGPLLSAILHAGPDGYEDGAVSFFERLREKFGATVDI 180
BLAST of mRNA_H-paniculata_contig2591.7064.1 vs. uniprot
Match: R1D395_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D395_EMIHU) HSP 1 Score: 118 bits (295), Expect = 6.010e-28 Identity = 59/126 (46.83%), Postives = 81/126 (64.29%), Query Frame = 3
Query: 342 RLEKFIDDCALLGPIRFVSMNDGAILESVGSFDNLRYSDQPKGRYATVSEGSGFECHLNMDKIKSITMVTKKSPMGEHDLYITRFLDEDGGTVLSAMLHGLDGSYEPGAADYWEKLRETFGAEQSV 719
R F LGP RFV +GAILE+VG+F+ LR S+ PKG ATVS G FECH+ + ++ S + V+K+ P G+ L+I R LD++GG +LSA+LH YE GA ++E+LRE FGA +
Sbjct: 13 RASFFSPHLEFLGPCRFVVQGEGAILEAVGAFEELRVSETPKGALATVSVGDSFECHVRLKEVASASFVSKEKPDGKA-LHIVRLLDKEGGPLLSAILHAGPDGYEDGAVSFFERLREKFGATVDI 137
BLAST of mRNA_H-paniculata_contig2591.7064.1 vs. uniprot
Match: A0A8J4GBI9_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GBI9_9CHLO) HSP 1 Score: 110 bits (274), Expect = 9.080e-25 Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = 3
Query: 345 LEKFIDDC--ALLGPIRFVSMNDGAILESVGSFDNLRYSDQP-KGRYATV-SEGSGFECHLNMDKIKSITMVTKKSPMGEHDLYITRFLDEDGGTVLSAMLHGLDGSYEPGAADYWEKLRETFG 704
L+ +DD A LG +RF+ + DGAILESV +F ++RY++ P +G ATV SE FECH+ + K++ + V K+ GE+D+Y TRFL D ++S +LHG G Y+P A + W L +G
Sbjct: 35 LQSLLDDAVNAGLGKVRFIVLGDGAILESVNNFGSVRYNEVPNRGVLATVASEDKSFECHITLSKVREVKFVKSKAKSGEYDIYATRFLGADSKVLMSCLLHGQQGQYDPAAVEAWTNLATKYG 158
BLAST of mRNA_H-paniculata_contig2591.7064.1 vs. uniprot
Match: A0A7S1SS16_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SS16_9CHLO) HSP 1 Score: 110 bits (274), Expect = 1.930e-24 Identity = 54/130 (41.54%), Postives = 80/130 (61.54%), Query Frame = 3
Query: 339 ERLEKFIDDCALLGPIRFVSMNDGAILESVGSFDNLRYSDQP-KGRYATV-SEGSGFECHLNMDKIKSITMVTKKSPMGEHDLYITRFLDEDGGTVLSAMLHGLDGSYEPGAADYWEKLRETFGAEQSVA 722
E ++ I+D + LG +RF+ + DG ILES FD + Y++ P KG Y T+ + FE H+ + K+ + MV + GE+D+Y FL EDGG +L+ +LHG +G+YEPGA + WE LR G +VA
Sbjct: 61 EGVKAVIEDLSTLGTLRFICIGDGGILESAQKFDEVSYNEVPNKGTYCTLKTTDKAFEAHIALAKVSEVKMVKARPRTGEYDIYKVSFLREDGGPMLTCLLHGPEGNYEPGAIEAWEALRAKNGETVTVA 190 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2591.7064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2591.7064.1 >prot_H-paniculata_contig2591.7064.1 ID=prot_H-paniculata_contig2591.7064.1|Name=mRNA_H-paniculata_contig2591.7064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp MTSTRTIHFTVSLLLYVLAHEVASFARLPTLGGNHALARVSRAVASTCTSback to top mRNA from alignment at H-paniculata_contig2591:2722..8486- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2591.7064.1 ID=mRNA_H-paniculata_contig2591.7064.1|Name=mRNA_H-paniculata_contig2591.7064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5765bp|location=Sequence derived from alignment at H-paniculata_contig2591:2722..8486- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2591:2722..8486- >mRNA_H-paniculata_contig2591.7064.1 ID=mRNA_H-paniculata_contig2591.7064.1|Name=mRNA_H-paniculata_contig2591.7064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1308bp|location=Sequence derived from alignment at H-paniculata_contig2591:2722..8486- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |