prot_H-paniculata_contig2590.7063.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2590.7063.1
Unique Nameprot_H-paniculata_contig2590.7063.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length287
Homology
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BLAST of mRNA_H-paniculata_contig2590.7063.1 vs. uniprot
Match: A0A6H5JD87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD87_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 8.660e-96
Identity = 136/182 (74.73%), Postives = 158/182 (86.81%), Query Frame = 0 
Query:   42 PEMVEAVFTLMREWINELPVPSLRWLEAWLDLAVSGMTVRHRGPARAVLNLIQACCAQRSDPTFTTAFSALLRDTRLGLAITRGLLSGLCGAMPSWMLDDLVATIRALFDTVNPASVSVWVEAVLQDSTFERYGVSDEGKIAFVRKLKEDLCCKDWRAFKAGLKAFCGGKKKGTGGTPPVHA 223
            PE+VEA+F LM EW+ ELPVPSLRWLEAWL +AVSG+ VRHRGPARAVL LIQACC+QR  P FT  FSALLR T LG+A+ RGLLSG+CGAMPSWMLDDLV T+R+LFD+++PA+ S  ++AVL+D +FERY V++E K+AF RKLKED C KDWRAFKAGLKAFCGGKKKGTGGTPPVHA
Sbjct:   74 PELVEALFKLMAEWVKELPVPSLRWLEAWLSVAVSGLAVRHRGPARAVLGLIQACCSQRKSPQFTATFSALLRGTALGVALARGLLSGMCGAMPSWMLDDLVLTVRSLFDSLSPAAASSCIDAVLRDPSFERYSVTNEHKVAFSRKLKEDFCNKDWRAFKAGLKAFCGGKKKGTGGTPPVHA 255
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BLAST of mRNA_H-paniculata_contig2590.7063.1 vs. uniprot
Match: D7FSA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA3_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 1.620e-49
Identity = 83/112 (74.11%), Postives = 94/112 (83.93%), Query Frame = 0 
Query:   36 GGPDAHPEMVEAVFTLMREWINELPVPSLRWLEAWLDLAVSGMTVRHRGPARAVLNLIQACCAQRSDPTFTTAFSALLRDTRLGLAITRGLLSGLCGAMPSWMLDDLVATIR 147
            GG  A PE+VEA+F LM EW+ ELPVPSLRWLEAWL +AVSG+ VRHRGPARAVL LIQACC+QR  P FT  FSALLR T LG+A+TRGLLSG+CGAMPSWMLDD V T++
Sbjct:  198 GGGGAPPELVEALFKLMAEWVKELPVPSLRWLEAWLSVAVSGLAVRHRGPARAVLGLIQACCSQRKSPQFTATFSALLRGTALGVALTRGLLSGMCGAMPSWMLDDHVLTVQ 309
[Close]
BLAST of mRNA_H-paniculata_contig2590.7063.1 vs. uniprot
Match: A9UQR0_MONBE (Uncharacterized protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UQR0_MONBE)

HSP 1 Score: 90.9 bits (224), Expect = 9.190e-17
Identity = 68/189 (35.98%), Postives = 87/189 (46.03%), Query Frame = 0 
Query:   39 DAHPEMVEAVFTLMREWINELPVPSLRWLEAWLDLAVS---GMT----VRHRGPARAVLNLIQACCAQRSDPTFTTAFSALLRDTRLGLA-ITRGLLSGLCGAMPSWMLDDLVATIRALFDTVNPASVSVWVEAVLQDSTFERYGVSDEGKIAFVRKLKEDLCCKDWRAFKAGLKAFCGGKKKGTGGTP 219
            DA P+ VEA+F L +      P   L   E  +DL +    G T    ++HR    A L  ++AC A RS     + F   L      +A I   LLS LC   PS ML+D VAT R L    +   V  WV   +    F RY VS   K  F +++ + L        K  +K FCGGKKKGT GTP
Sbjct:  806 DAGPDTVEALFCLFQTVARTHPQYLLHQPELAIDLLIHHFLGPTFTAVLQHRPVISAALGYVEACAA-RSPEGSPSIFDVALEHRPTAIAEIVATLLSALCLIFPSHMLEDTVATFRRLMQPYSLERVGEWVAWAINQPAFPRYSVSATAKQIFAQEVVQALQQPASSRLKGTIKQFCGGKKKGTSGTP 993
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2590.7063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JD87_9PHAE8.660e-9674.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSA3_ECTSI1.620e-4974.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A9UQR0_MONBE9.190e-1735.98Uncharacterized protein n=1 Tax=Monosiga brevicoll... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 29..197
e-value: 9.0E-16
score: 59.2
NoneNo IPR availablePANTHERPTHR12363TRANSPORTIN 3 AND IMPORTIN 13coord: 38..209
NoneNo IPR availablePANTHERPTHR12363:SF33IMPORTIN-13coord: 38..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2590contigH-paniculata_contig2590:11226..19244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2590.7063.1mRNA_H-paniculata_contig2590.7063.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2590 8710..20318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2590.7063.1 ID=prot_H-paniculata_contig2590.7063.1|Name=mRNA_H-paniculata_contig2590.7063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=287bp
MPLFGGNRSRGGGCSRKRGGGRSSRGKVRGCCRCRGGPDAHPEMVEAVFT
LMREWINELPVPSLRWLEAWLDLAVSGMTVRHRGPARAVLNLIQACCAQR
SDPTFTTAFSALLRDTRLGLAITRGLLSGLCGAMPSWMLDDLVATIRALF
DTVNPASVSVWVEAVLQDSTFERYGVSDEGKIAFVRKLKEDLCCKDWRAF
KAGLKAFCGGKKKGTGGTPPVHAAHANRQQQQQQQVLLQQQAQQPAQADQ
PAVRHSGEFRDAGGVVAMGNDDPETTSPFMLRSMTM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like