prot_H-paniculata_contig25868.7050.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25868.7050.1
Unique Nameprot_H-paniculata_contig25868.7050.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
BLAST of mRNA_H-paniculata_contig25868.7050.1 vs. uniprot
Match: A0A6H5KSB9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSB9_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 6.670e-40
Identity = 70/74 (94.59%), Postives = 73/74 (98.65%), Query Frame = 0
Query:    1 KTFRLHSKRFYAKADTCCDLLICDEAHRLKNAETATNQALSALKCRRRVLLSGTPMQNDLEEFYAMADFTNPGV 74
            +TFRLHSKRFYAKADTCCDLLICDEAHRLKNA+TATNQALSALKCR+RVLLSGTPMQNDLEEFYAM DFTNPGV
Sbjct:  261 ETFRLHSKRFYAKADTCCDLLICDEAHRLKNADTATNQALSALKCRKRVLLSGTPMQNDLEEFYAMTDFTNPGV 334          
BLAST of mRNA_H-paniculata_contig25868.7050.1 vs. uniprot
Match: W7TPR5_9STRA (Rad54-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPR5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.760e-30
Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    1 KTFRLHSKRFYAKADTCCDLLICDEAHRLKNAETATNQALSALKCRRRVLLSGTPMQNDLEEFYAMADFTNPGV 74
            +TFR H+K F A    CCD+LICDEAHRLKNAETATNQAL+ L CRRRVLLSGTP+QNDL EFYAM DFTNPG+
Sbjct:  328 ETFRGHAKSFPAGCAGCCDVLICDEAHRLKNAETATNQALAKLHCRRRVLLSGTPLQNDLNEFYAMVDFTNPGI 401          
BLAST of mRNA_H-paniculata_contig25868.7050.1 vs. uniprot
Match: A0A836CHF7_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF7_9STRA)

HSP 1 Score: 117 bits (293), Expect = 3.530e-29
Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 0
Query:    1 KTFRLHSKRFY-AKADTCCDLLICDEAHRLKNAETATNQALSALKCRRRVLLSGTPMQNDLEEFYAMADFTNPG 73
            +TFR+H+ RF  A A+T CDLL+CDEAHRLKN +TAT++AL+ LKCRRRVLLSGTPMQNDLEEFYAM DF NPG
Sbjct:  106 ETFRMHAARFGGAHANTSCDLLVCDEAHRLKNGDTATSKALAGLKCRRRVLLSGTPMQNDLEEFYAMVDFANPG 179          
BLAST of mRNA_H-paniculata_contig25868.7050.1 vs. uniprot
Match: A0A388K9Y3_CHABU (Uncharacterized protein n=2 Tax=Streptophytina TaxID=131221 RepID=A0A388K9Y3_CHABU)

HSP 1 Score: 117 bits (294), Expect = 4.200e-29
Identity = 56/74 (75.68%), Postives = 66/74 (89.19%), Query Frame = 0
Query:    1 KTFRLHSKRFYAKADTCCDLLICDEAHRLKNAETATNQALSALKCRRRVLLSGTPMQNDLEEFYAMADFTNPGV 74
            +TFRLH K+F+ +++  CDLLICDEAHRLKN +T TNQAL+A+ CRRRVLLSGTPMQNDLEEF+AM DFTNPGV
Sbjct:  495 ETFRLHCKKFH-ESERSCDLLICDEAHRLKNDKTLTNQALAAMPCRRRVLLSGTPMQNDLEEFFAMVDFTNPGV 567          
BLAST of mRNA_H-paniculata_contig25868.7050.1 vs. uniprot
Match: A0A5J5BWB8_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BWB8_9ASTE)

HSP 1 Score: 117 bits (293), Expect = 5.680e-29
Identity = 54/74 (72.97%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 KTFRLHSKRFYAKADTCCDLLICDEAHRLKNAETATNQALSALKCRRRVLLSGTPMQNDLEEFYAMADFTNPGV 74
            +TFR+HS +F    D CCDLLICDEAHRLKN +T TN+AL+AL C+RR+LLSGTPMQNDLEEFYAM +FTNPG+
Sbjct:  314 ETFRMHSSKF--SQDGCCDLLICDEAHRLKNDQTLTNRALAALSCKRRILLSGTPMQNDLEEFYAMVNFTNPGI 385          
BLAST of mRNA_H-paniculata_contig25868.7050.1 vs. uniprot
Match: A0A8K1C4Y7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4Y7_PYTOL)

HSP 1 Score: 117 bits (292), Expect = 7.780e-29
Identity = 55/74 (74.32%), Postives = 65/74 (87.84%), Query Frame = 0
Query:    1 KTFRLHSKRFYAKADTCCDLLICDEAHRLKNAETATNQALSALKCRRRVLLSGTPMQNDLEEFYAMADFTNPGV 74
            +TFR+H++RF A A +CCDLLICDEAHRLKNA +  N+ALS+L CR+RVLLSGTPMQNDLEEFYAM DFTNP +
Sbjct:  320 ETFRMHAQRF-ADAPSCCDLLICDEAHRLKNANSQINRALSSLACRKRVLLSGTPMQNDLEEFYAMVDFTNPNI 392          
BLAST of mRNA_H-paniculata_contig25868.7050.1 vs. uniprot
Match: A0A024GTU5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTU5_9STRA)

HSP 1 Score: 114 bits (286), Expect = 5.010e-28
Identity = 53/74 (71.62%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 KTFRLHSKRFYAKADTCCDLLICDEAHRLKNAETATNQALSALKCRRRVLLSGTPMQNDLEEFYAMADFTNPGV 74
            +TFR+H+ +F++  D CCDLLICDEAHRLKN+ +  N+AL+AL CRRRVLLSGTPMQNDLEEFYAM DFTNP +
Sbjct:  295 ETFRMHAAKFHSAPD-CCDLLICDEAHRLKNSHSQINRALAALACRRRVLLSGTPMQNDLEEFYAMVDFTNPDI 367          
BLAST of mRNA_H-paniculata_contig25868.7050.1 vs. uniprot
Match: A0A1D1XW50_9ARAE (DNA repair and recombination protein RAD54-like (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XW50_9ARAE)

HSP 1 Score: 114 bits (284), Expect = 9.330e-28
Identity = 53/74 (71.62%), Postives = 62/74 (83.78%), Query Frame = 0
Query:    1 KTFRLHSKRFYAKADTCCDLLICDEAHRLKNAETATNQALSALKCRRRVLLSGTPMQNDLEEFYAMADFTNPGV 74
            +TFR+HS +F      CCDLLICDEAHRLKN +T TN+AL AL CRRR+LLSGTPMQNDLEEF+AM +FTNPG+
Sbjct:  270 ETFRMHSSKFDRSG--CCDLLICDEAHRLKNEQTLTNRALDALPCRRRILLSGTPMQNDLEEFFAMVNFTNPGI 341          
BLAST of mRNA_H-paniculata_contig25868.7050.1 vs. uniprot
Match: A0A1V9YSL6_9STRA (DNA repair and recombination protein RAD54 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YSL6_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.010e-27
Identity = 53/74 (71.62%), Postives = 62/74 (83.78%), Query Frame = 0
Query:    1 KTFRLHSKRFYAKADTCCDLLICDEAHRLKNAETATNQALSALKCRRRVLLSGTPMQNDLEEFYAMADFTNPGV 74
            KTFR+H+++F A     C+LLICDEAHRLKNA +  NQAL+AL C+RRVLLSGTPMQNDLEEFYAM DFTNP +
Sbjct:  271 KTFRMHAEKF-ANEPQACELLICDEAHRLKNANSQINQALAALPCKRRVLLSGTPMQNDLEEFYAMVDFTNPNI 343          
BLAST of mRNA_H-paniculata_contig25868.7050.1 vs. uniprot
Match: A0A6A3YSV7_9STRA (Protein CHROMATIN REMODELING 25 n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YSV7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.280e-27
Identity = 53/74 (71.62%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 KTFRLHSKRFYAKADTCCDLLICDEAHRLKNAETATNQALSALKCRRRVLLSGTPMQNDLEEFYAMADFTNPGV 74
            +TFR+H+++F A A  CCDLLICDEAHRLKNA +  N+ALS+L CR+RVLLSGTPMQNDLEEF+AM DFTNP +
Sbjct:  308 ETFRMHAQKF-ADAPECCDLLICDEAHRLKNANSQINKALSSLACRKRVLLSGTPMQNDLEEFFAMVDFTNPNI 380          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25868.7050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSB9_9PHAE6.670e-4094.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TPR5_9STRA4.760e-3077.03Rad54-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A836CHF7_9STRA3.530e-2975.68SNF2 family N-terminal domain-containing protein n... [more]
A0A388K9Y3_CHABU4.200e-2975.68Uncharacterized protein n=2 Tax=Streptophytina Tax... [more]
A0A5J5BWB8_9ASTE5.680e-2972.97Uncharacterized protein n=1 Tax=Nyssa sinensis Tax... [more]
A0A8K1C4Y7_PYTOL7.780e-2974.32Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GTU5_9STRA5.010e-2871.62Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A1D1XW50_9ARAE9.330e-2871.62DNA repair and recombination protein RAD54-like (F... [more]
A0A1V9YSL6_9STRA1.010e-2771.62DNA repair and recombination protein RAD54 n=1 Tax... [more]
A0A6A3YSV7_9STRA1.280e-2771.62Protein CHROMATIN REMODELING 25 n=5 Tax=Phytophtho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..74
e-value: 1.2E-25
score: 91.7
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 20..73
e-value: 1.4E-15
score: 56.9
NoneNo IPR availablePANTHERPTHR45629:SF6DNA REPAIR AND RECOMBINATION PROTEIN RAD54-LIKEcoord: 2..74
NoneNo IPR availablePANTHERPTHR45629FAMILY NOT NAMEDcoord: 2..74
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..73
score: 12.659
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25868contigH-paniculata_contig25868:2967..3188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25868.7050.1mRNA_H-paniculata_contig25868.7050.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25868 2967..3188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25868.7050.1 ID=prot_H-paniculata_contig25868.7050.1|Name=mRNA_H-paniculata_contig25868.7050.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
KTFRLHSKRFYAKADTCCDLLICDEAHRLKNAETATNQALSALKCRRRVL
LSGTPMQNDLEEFYAMADFTNPGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase