prot_H-paniculata_contig25819.7040.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25819.7040.1
Unique Nameprot_H-paniculata_contig25819.7040.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length132
Homology
BLAST of mRNA_H-paniculata_contig25819.7040.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 3.870e-26
Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = 0
Query:    3 AFPYREAVGALMLATTMMQPDIAHTVCTTAKFCKNPGVAYKRTVAKILQYVLRTADLGITFG-GQDCGVEMLAYADSGYGMCQDSGRSVSGGAVLLGGKAISWHSRTQEVTAAGTTEAEYVALAEMVSEV 131
            ++P+RE +G+LM   T  +P+IA+     A++C +P   + R    IL YV+RT+DLGITFG G   G+ M  +AD+ Y       RSVSGG V+ G   ISW SRTQ+     TTEAEYV+LA+++ EV
Sbjct:   69 SWPFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEV 198          
BLAST of mRNA_H-paniculata_contig25819.7040.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 2.450e-24
Identity = 56/128 (43.75%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    5 PYREAVGALMLATTMMQPDIAHTVCTTAKFCKNPGVAYKRTVAKILQYVLRTADLGITFG-GQDCGVEMLAYADSGYGMCQDSGRSVSGGAVLLGGKAISWHSRTQEVTAAGTTEAEYVALAEMVSEV 131
            P+RE VG+LM   T  +PDIA+ V   A++C +P + + +    IL YV RT+ +GITF  G   G+ M  + D+ Y       RSVSGG V+ GG  ++W SRTQ+     TTEAEYVA+A+++ EV
Sbjct:   99 PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEV 226          
BLAST of mRNA_H-paniculata_contig25819.7040.1 vs. uniprot
Match: A0A6H5KRB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRB4_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 4.720e-24
Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = 0
Query:    4 FPYREAVGALMLATTMMQPDIAHTVCTTAKFCKNPGVAYKRTVAKILQYVLRTADLGITFG-GQDCGVEMLAYADSGYGMCQDSGRSVSGGAVLLGGKAISWHSRTQEVTAAGTTEAEYVALAEMVSEV 131
            FP+RE VG+LM   T  +PDIA+ V   A++C +P + +      IL Y  RT+  GI+F  G   G  +  YAD+ +       RSVSGG V  GG A+SW SRTQ+     TTEAEYVAL ++V E+
Sbjct:   97 FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEI 225          
BLAST of mRNA_H-paniculata_contig25819.7040.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 5.290e-24
Identity = 56/128 (43.75%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    5 PYREAVGALMLATTMMQPDIAHTVCTTAKFCKNPGVAYKRTVAKILQYVLRTADLGITFG-GQDCGVEMLAYADSGYGMCQDSGRSVSGGAVLLGGKAISWHSRTQEVTAAGTTEAEYVALAEMVSEV 131
            P+RE VG+LM   T  +PDIA+ V   A++C +P + + +    IL YV RT+ +GITF  G   G+ M  + D+ Y       RSVSGG V+ GG  ++W SRTQ+     TTEAEYVA+A+++ EV
Sbjct:  154 PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEV 281          
BLAST of mRNA_H-paniculata_contig25819.7040.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 9.870e-24
Identity = 56/128 (43.75%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    5 PYREAVGALMLATTMMQPDIAHTVCTTAKFCKNPGVAYKRTVAKILQYVLRTADLGITFG-GQDCGVEMLAYADSGYGMCQDSGRSVSGGAVLLGGKAISWHSRTQEVTAAGTTEAEYVALAEMVSEV 131
            P+RE VG+LM   T  +PDIA+ V   A++C +P + + +    IL YV RT+ +GITF  G   G+ M  + D+ Y       RSVSGG V+ GG  ++W SRTQ+     TTEAEYVA+A+++ EV
Sbjct:  216 PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEV 343          
BLAST of mRNA_H-paniculata_contig25819.7040.1 vs. uniprot
Match: A0A6H5LC04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC04_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.190e-23
Identity = 56/129 (43.41%), Postives = 81/129 (62.79%), Query Frame = 0
Query:    3 AFPYREAVGALMLATTMMQPDIAHTVCTTAKFCKNPGVAYKRTVAKILQYVLRTADLGITFG-GQDCGVEMLAYADSGYGMCQDSGRSVSGGAVLLGGKAISWHSRTQEVTAAGTTEAEYVALAEMVSE 130
            ++P+RE +G+L+   T  +PDIA+ +   A++C +P   + R    IL YV+RT+DLGITFG G    + M  + D+ Y       RSVSGG V+ GG  ISW SRTQ+     TTEAEYV++A+++ E
Sbjct:  905 SWPFRELIGSLVWLATQTRPDIANALRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAMLSMEVFGDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSVADVMKE 1033          
BLAST of mRNA_H-paniculata_contig25819.7040.1 vs. uniprot
Match: A0A6H5K3H6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H6_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.630e-23
Identity = 56/128 (43.75%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    5 PYREAVGALMLATTMMQPDIAHTVCTTAKFCKNPGVAYKRTVAKILQYVLRTADLGITF-GGQDCGVEMLAYADSGYGMCQDSGRSVSGGAVLLGGKAISWHSRTQEVTAAGTTEAEYVALAEMVSEV 131
            P+RE VG+LM   T  +PDIA+ V   A++C +P + + +    IL YV RT+ +GITF  G   G+ M  + D+ Y       RSVSGG V+ GG  ++W SRTQ+     TTEAEYVA+A+++ EV
Sbjct:  752 PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFENGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEV 879          
BLAST of mRNA_H-paniculata_contig25819.7040.1 vs. uniprot
Match: A0A6H5KD11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD11_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 2.190e-23
Identity = 56/128 (43.75%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    5 PYREAVGALMLATTMMQPDIAHTVCTTAKFCKNPGVAYKRTVAKILQYVLRTADLGITFG-GQDCGVEMLAYADSGYGMCQDSGRSVSGGAVLLGGKAISWHSRTQEVTAAGTTEAEYVALAEMVSEV 131
            P+RE VG+LM   T  +PDIA+ V   A++C +P + + +    IL YV RT+ +GITF  G   G+ M  + D+ Y       RSVSGG V+ GG  ++W SRTQ+     TTEAEYVA+A+++ EV
Sbjct:  106 PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEV 233          
BLAST of mRNA_H-paniculata_contig25819.7040.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.250e-23
Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = 0
Query:    4 FPYREAVGALMLATTMMQPDIAHTVCTTAKFCKNPGVAYKRTVAKILQYVLRTADLGITFG-GQDCGVEMLAYADSGYGMCQDSGRSVSGGAVLLGGKAISWHSRTQEVTAAGTTEAEYVALAEMVSEV 131
            FP+RE VG+LM   T  +PDIA+ V   A++C +P + +      IL Y  RT+  GI+F  G   G  +  YAD+ +       RSVSGG V  GG A+SW SRTQ+     TTEAEYVAL ++V E+
Sbjct:  239 FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEI 367          
BLAST of mRNA_H-paniculata_contig25819.7040.1 vs. uniprot
Match: A0A6H5JKY9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY9_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 2.260e-23
Identity = 56/128 (43.75%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    5 PYREAVGALMLATTMMQPDIAHTVCTTAKFCKNPGVAYKRTVAKILQYVLRTADLGITFG-GQDCGVEMLAYADSGYGMCQDSGRSVSGGAVLLGGKAISWHSRTQEVTAAGTTEAEYVALAEMVSEV 131
            P+RE VG+LM   T  +PDIA+ V   A++C +P + + +    IL YV RT+ +GITF  G   G+ M  + D+ Y       RSVSGG V+ GG  ++W SRTQ+     TTEAEYVA+A+++ EV
Sbjct: 1196 PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGISMQVFLDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEV 1323          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25819.7040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD60_9PHAE3.870e-2645.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE2.450e-2443.75Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRB4_9PHAE4.720e-2444.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE5.290e-2443.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEF2_9PHAE9.870e-2443.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5LC04_9PHAE1.190e-2343.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3H6_9PHAE1.630e-2343.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD11_9PHAE2.190e-2343.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG2_9PHAE2.250e-2344.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JKY9_9PHAE2.260e-2343.75Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..131
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..131
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25819contigH-paniculata_contig25819:792..1187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25819.7040.1mRNA_H-paniculata_contig25819.7040.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25819 792..1187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25819.7040.1 ID=prot_H-paniculata_contig25819.7040.1|Name=mRNA_H-paniculata_contig25819.7040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp
MRAFPYREAVGALMLATTMMQPDIAHTVCTTAKFCKNPGVAYKRTVAKIL
QYVLRTADLGITFGGQDCGVEMLAYADSGYGMCQDSGRSVSGGAVLLGGK
AISWHSRTQEVTAAGTTEAEYVALAEMVSEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like