mRNA_H-paniculata_contig25817.7039.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig25817.7039.1 vs. uniprot
Match: A0A6H5KIR5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR5_9PHAE) HSP 1 Score: 165 bits (417), Expect = 7.790e-44 Identity = 98/180 (54.44%), Postives = 113/180 (62.78%), Query Frame = 2
Query: 5 NKAKRRILAGSFVLSPAGYRDYYAPAVQVLKRIRREMHAAMSVADVLLTPTTPFPAFPY-GAPADTAGLL-NDALTVPANLAGVPAISIPVSTVMS-----------------------SGSIEPGERDGLPVSGTCALPLGMQIMGRPFGEAAVLRVAHALERHFDFASLVPERVRQAR 469
++ KRRIL G FVL + Y DYY A++V KR+RREM AA+S ADVLL PTTPFP FP G PAD A LL ND LTVP +L GVPA+SIPV+T + SG E G P + C LPLGMQI+GRP GEAA+LRVAH LE DFAS VPERVR+ R
Sbjct: 400 DEVKRRILTGCFVLCESAYHDYYELAIEVRKRLRREMRAALSEADVLLAPTTPFPPFPSCGPPADPASLLLNDVLTVPISLTGVPAVSIPVATTPTARRTTPAVTSTSCCSSDRGGAGXSGGAEAGVGAAAPGAEHCRLPLGMQIIGRPLGEAAMLRVAHELESRLDFASQVPERVREPR 579
BLAST of mRNA_H-paniculata_contig25817.7039.1 vs. uniprot
Match: D8LG70_ECTSI (Amidase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG70_ECTSI) HSP 1 Score: 119 bits (298), Expect = 2.980e-30 Identity = 77/145 (53.10%), Postives = 87/145 (60.00%), Query Frame = 2
Query: 113 MHAAMSVADVLLTPTTPFPAFPY-GAPADTAGLL-NDALTVPANLAGVPAISIPVSTV-------------MSSGSIEPGERDGLPV-----------SGTCALPLGMQIMGRPFGEAAVLRVAHALERHFDFASLVPERVRQAR 469
M AA++VADVLL PTTPFP FP G PAD A LL ND LTVP +L GVPA+SIPV+T SS + G +G C LPLGMQI+GRP GEAA+LRVAH LE DFAS VPERVR+ R
Sbjct: 1 MRAALAVADVLLAPTTPFPPFPSCGPPADPASLLLNDVLTVPISLTGVPAVSIPVATTPTARRTXXXXXXXXSSCGSDRGXXXXXXXXXXXXXXXXXXAGHCRLPLGMQIIGRPLGEAAMLRVAHELESRLDFASQVPERVREPR 145
BLAST of mRNA_H-paniculata_contig25817.7039.1 vs. uniprot
Match: A0A5D6Y1X3_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1X3_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.400e-23 Identity = 73/161 (45.34%), Postives = 92/161 (57.14%), Query Frame = 2
Query: 5 NKAKRRILAGSFVLSPAGYRDYYAPAVQVLKRIRREMHAAMSV--ADVLLTPTTPFPAFPYGAPA----DTAGLLNDALTVPANLAGVPAISIPVSTVMSSGSIEPGERDGLPVSGTCALPLGMQIMGRPFGEAAVLRVAHALERHFDFASLVPERVRQAR 469
++ +RRIL+G+FVLS DYY AV V ++IR + A DVLLTPTTP F A LND +T+PAN+AGVPA+SIP S + S G PLG+Q+MG EA VLRVAHALE+ DFASL+P RV ++R
Sbjct: 398 DEVQRRILSGTFVLSAGAMSDYYERAVIVRQKIREDFENAFEAQGVDVLLTPTTPSGPFAVHNKLVKEDPVAMYLNDVMTIPANMAGVPAMSIPAS-LTSKGDH----------------PLGLQLMGARRTEATVLRVAHALEQRADFASLIPSRVYESR 541
BLAST of mRNA_H-paniculata_contig25817.7039.1 vs. uniprot
Match: W7TVN2_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVN2_9STRA) HSP 1 Score: 107 bits (267), Expect = 5.850e-23 Identity = 67/155 (43.23%), Postives = 96/155 (61.94%), Query Frame = 2
Query: 5 NKAKRRILAGSFVLSPAGYRDYYAPAVQVLKRIRREMHAAMSVADVLLTPTTPFPAFPYGAPADTAGLL-NDALTVPANLAGVPAISIPVSTVMSSGSIEPGERDGLPVSGTCALPLGMQIMGRPFGEAAVLRVAHALERHFDFASLVPERVRQA 466
++ +RR+++G VLS Y YY A+ R+RREM+ A+S DVLLTP TP FP PA+ A L+ ND +TVPA+LAG+PAI++PV ++ S PG LPV P+G+Q++GR E +L VA ALE +F+ +P+ V +A
Sbjct: 460 DEVQRRVISGCRVLSAQAYATYYEKALAARIRLRREMNTALSHVDVLLTPVTPTGPFPLTTPAEPAALMVNDVMTVPASLAGLPAIAVPVD--LAPSSFVPG----LPV------PVGLQLIGRHLCEQQLLIVARALEVRCNFSERIPDYVVKA 602
BLAST of mRNA_H-paniculata_contig25817.7039.1 vs. uniprot
Match: X0WPH9_9ZZZZ (Amidase domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0WPH9_9ZZZZ) HSP 1 Score: 102 bits (253), Expect = 1.780e-22 Identity = 63/141 (44.68%), Postives = 84/141 (59.57%), Query Frame = 2
Query: 5 NKAKRRILAGSFVLSPAGYRDYYAPAVQVLKRIRREMHAAMSVADVLLTPTTPFPAFPYGAP-ADTAGL-LNDALTVPANLAGVPAISIPVSTVMSSGSIEPGERDGLPVSGTCALPLGMQIMGRPFGEAAVLRVAHALER 421
++ KRRI+ G++ LS Y YY A +V IRRE AA DVL+TP +P PAF G AD + L+D T+P N+AG+PAIS+P + S EPG R LP+G+QIM +PF E A+LRVA+A E+
Sbjct: 119 DEVKRRIMLGTYALSAGYYDAYYLKAQKVRTLIRREFDAAFQRCDVLVTPVSPTPAFKLGEKTADPLQMYLSDVCTIPVNIAGIPAISVPCG--FADASPEPGRR---------GLPVGLQIMAKPFDEPAILRVAYAYEQ 248
BLAST of mRNA_H-paniculata_contig25817.7039.1 vs. uniprot
Match: W9HAW8_9PROT (Glutamyl-tRNA(Gln) amidotransferase subunit A n=6 Tax=Skermanella TaxID=204447 RepID=W9HAW8_9PROT) HSP 1 Score: 105 bits (262), Expect = 2.170e-22 Identity = 68/149 (45.64%), Postives = 84/149 (56.38%), Query Frame = 2
Query: 8 KAKRRILAGSFVLSPAGYRDYYAPAVQVLKRIRREMHAAMSVADVLLTPTTPFPAFPYGAPADT--AGLLNDALTVPANLAGVPAISIPVSTVMSSGSIEPGERDGLPVSGTCALPLGMQIMGRPFGEAAVLRVAHALERHFDFASLVP 448
+ KRRI+ G++VLS Y YY A QV RI ++ A + DV+LTPT P AF G D A LND TVPA+LAG+P IS+P GL G LPLG+QI+GRPF EA VL+VA LE+ DF +L P
Sbjct: 388 EVKRRIMIGTYVLSAGYYDAYYLKAQQVRTRIAQDFEEAYKLCDVILTPTAPSTAFAIGEKMDDPIAMYLNDVFTVPASLAGLPGISVPA---------------GLASDG---LPLGLQILGRPFDEATVLKVAGVLEQAADFNTLPP 518
BLAST of mRNA_H-paniculata_contig25817.7039.1 vs. uniprot
Match: K3X8K8_GLOUD (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8K8_GLOUD) HSP 1 Score: 104 bits (260), Expect = 4.430e-22 Identity = 71/160 (44.38%), Postives = 93/160 (58.13%), Query Frame = 2
Query: 8 KAKRRILAGSFVLSPAGYRDYYAPAVQVLKRIRREMHAAMSVA--DVLLTPTTP---FPAFPYGAPADTAGL-LNDALTVPANLAGVPAISIPVSTVMSSGSIEPGERDGLPVSGTCALPLGMQIMGRPFGEAAVLRVAHALERHFDFASLVPERVRQAR 469
+ +RRIL+G+FVLS DYY AV + ++IR + A DVL+TPTTP F D G+ LND +T+PAN+AGVPAISIP S ++SG PLG+Q+MG E VL+VA+ALERH F+SL+PE V +AR
Sbjct: 406 EVQRRILSGTFVLSAGAMSDYYERAVILRQKIRDDFQNAFKNQGIDVLMTPTTPSGPFAVHNKQVKEDPVGMYLNDVMTIPANMAGVPAISIPAS--LTSGD---------------EFPLGLQLMGARKTEEKVLQVANALERHAQFSSLIPESVFEAR 548
BLAST of mRNA_H-paniculata_contig25817.7039.1 vs. uniprot
Match: T0BRJ7_ALIAG (Glutamyl-tRNA(Gln) amidotransferase subunit A n=3 Tax=Alicyclobacillus TaxID=29330 RepID=T0BRJ7_ALIAG) HSP 1 Score: 103 bits (258), Expect = 6.090e-22 Identity = 64/150 (42.67%), Postives = 83/150 (55.33%), Query Frame = 2
Query: 8 KAKRRILAGSFVLSPAGYRDYYAPAVQVLKRIRREMHAAMSVADVLLTPTTPFPAFPYGAPADT--AGLLNDALTVPANLAGVPAISIPVSTVMSSGSIEPGERDGLPVSGTCALPLGMQIMGRPFGEAAVLRVAHALERHFDFASLVPE 451
+ KRRI+ G++ LS Y YY A Q+ IRR+ A DV+L PTTP AFP+G +D A LND T+PANLAG+P S+P V DGLPV G+Q++ +PF E +LRVAHA E+ DF+ PE
Sbjct: 345 EVKRRIIIGTYALSSGYYDAYYKRAQQMRTLIRRDYEQAFEQCDVILMPTTPTTAFPFGEKSDDPLAMYLNDIYTIPANLAGIPGASVPCGFV-----------DGLPV--------GLQVLAKPFAERTILRVAHAYEQVRDFSWPQPE 475
BLAST of mRNA_H-paniculata_contig25817.7039.1 vs. uniprot
Match: A0A2D9EYE7_9PROT (Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9EYE7_9PROT) HSP 1 Score: 103 bits (258), Expect = 6.720e-22 Identity = 64/147 (43.54%), Postives = 82/147 (55.78%), Query Frame = 2
Query: 8 KAKRRILAGSFVLSPAGYRDYYAPAVQVLKRIRREMHAAMSVADVLLTPTTPFPAFPYGAPADT--AGLLNDALTVPANLAGVPAISIPVSTVMSSGSIEPGERDGLPVSGTCALPLGMQIMGRPFGEAAVLRVAHALERHFDFASL 442
+ +RR++ G++VLS Y YY A +V RI + A DVLLTPT P AFP GA D A LND TVPANLAG+P IS+P ++DGL PLG+Q++G+PF EA + R A ALE DF +L
Sbjct: 362 EVRRRVMIGTYVLSAGYYDAYYVKAQKVRTRILEDFTKAFQDVDVLLTPTAPNAAFPVGAKMDDPIAMYLNDVFTVPANLAGLPGISVPAGL----------DKDGL--------PLGLQLVGKPFDEATLFRCAQALEEAADFTAL 490
BLAST of mRNA_H-paniculata_contig25817.7039.1 vs. uniprot
Match: A0A3M2F696_9BACT (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A3M2F696_9BACT) HSP 1 Score: 103 bits (257), Expect = 9.470e-22 Identity = 63/153 (41.18%), Postives = 88/153 (57.52%), Query Frame = 2
Query: 8 KAKRRILAGSFVLSPAGYRDYYAPAVQVLKRIRREMHAAMSVADVLLTPTTPFPAFPYGAPADTA--GLLNDALTVPANLAGVPAISIPVSTVMSSGSIEP---GERDGLPVSGTCALPLGMQIMGRPFGEAAVLRVAHALERHFDFASLVPE 451
+ KRRIL G++ LS Y YY A++V I+R+ A DV+ TPT+P PAF G D L+D T+ NLAG+PAISIP V ++E G+ + + G LP+G+Q++G+PF EA +LRVA A +R D+ VPE
Sbjct: 349 EVKRRILLGTYALSSGYYDAYYKTALKVRTLIQRDFLEAFRSVDVIATPTSPTPAFRAGERLDDPIKMYLSDVFTISVNLAGLPAISIPCGFVKRGKALEERKNGDAEEEAMQGGADLPVGLQLIGKPFDEAGILRVADAYQRRTDYHLRVPE 501 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25817.7039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25817.7039.1 >prot_H-paniculata_contig25817.7039.1 ID=prot_H-paniculata_contig25817.7039.1|Name=mRNA_H-paniculata_contig25817.7039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp MNKAKRRILAGSFVLSPAGYRDYYAPAVQVLKRIRREMHAAMSVADVLLTback to top mRNA from alignment at H-paniculata_contig25817:1345..3525+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25817.7039.1 ID=mRNA_H-paniculata_contig25817.7039.1|Name=mRNA_H-paniculata_contig25817.7039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2181bp|location=Sequence derived from alignment at H-paniculata_contig25817:1345..3525+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25817:1345..3525+ >mRNA_H-paniculata_contig25817.7039.1 ID=mRNA_H-paniculata_contig25817.7039.1|Name=mRNA_H-paniculata_contig25817.7039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig25817:1345..3525+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |