prot_H-paniculata_contig258.7030.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig258.7030.1
Unique Nameprot_H-paniculata_contig258.7030.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length546
Homology
BLAST of mRNA_H-paniculata_contig258.7030.1 vs. uniprot
Match: D7FV86_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV86_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 1.600e-124
Identity = 258/539 (47.87%), Postives = 321/539 (59.55%), Query Frame = 0
Query:   27 VGTVEVPGTNSLGSLEQSSHASSSPSTTATMTTISAASLGPWPEGYSNSPPPPASPARDAT-----------LHSALAFLERRTRASTSAETPAIMRGTGADAGFGNLSGGMIAGGSGQDGFLSHWGDDSDPAGILDEDDDDNVCPSMLFSCLPCLVCLRPGKRRRSTV-DG-----IKNRSRSQTSLTTPLLTDRQGFPPPEFPKDVKLLEVEVESAKNVPVINMMNADQWSAASGRYVTLQIRPLQEGVGEQTQQTCLARRVVHPRWVSIKEGHKETFTFFVTDTGASARAFLLICLMHRPYRPPSARLSTLPSSTAVDN-SLSSEAALPSGAQAGDVVLGKGFVDLLELF--------PTGGKGNLRRVAVPMEDPARKRRTTCAVMLGIRCRRVNESIDTREDRLYEYQRWTTVAGWSTTDGRDPGKWSTSDGSVFSDTFAGVAPPAREDSEVVLPWCPFGGWEYSRGEEFSAA-----TSSVADEIKNEYATNNGGGNGISMTKAKLGQKYPWVWTERPDSG--GVRRRLWRRV 532
            VG+     +N+L  LE+S  ++ SP       T++AA+  PWP G+    PP  + +   T             SALAFLER   A   A    I+ G GA+ G G LSGGM+A G+ + GFL    D        +ED D  +CPSML+SC PC    R GKRR + + DG     +K  SR+Q SL+TPLLT+ Q   P  FP DVKL+EVEVESA+N+P+   +N    +  +G Y  L+I P+QEGVGEQ  QT LA R V+P W     G +ETFTFFVTD  A ++AFL + L++RP RPP A     P        S +S A++ SG++ GDV + +GFVDLL LF        P   KGN RRVAVPM +P  KRRT C+VMLG+RCRRVNE+IDTREDRLYEY+RWT VAGWST   +  GKWST DGSV SD FA VAP   ED+EVVLPWCPFGGWEYSRGEE  A+     TS      ++E+A + G     +   A+ G     VW E    G   VRRRLWRRV
Sbjct:   86 VGSSRGRSSNALSFLERSDRSTDSP-------TVAAATTNPWPVGFV---PPQGTKSNRTTGWSQSYTPYLPRTSALAFLER---APGRARGNNIVGGAGAEDGLGTLSGGMVAAGADRGGFLPRPYDTGSECSDAEEDSD--ICPSMLYSCFPCFNWSRRGKRRPADLLDGGLANSVKRESRAQLSLSTPLLTE-QPPSPTNFPTDVKLIEVEVESARNLPLGERVNM---ADLAGTYAILRITPVQEGVGEQVNQTSLATRPVNPSW-----GGRETFTFFVTDV-AGSKAFLSLQLLYRPLRPPPAPQPLQPPLPLRRGASEASLASVSSGSRHGDVTIAEGFVDLLGLFSLVDGTYTPGTMKGNARRVAVPMREPKGKRRTRCSVMLGLRCRRVNETIDTREDRLYEYERWTRVAGWSTAGKKRAGKWSTLDGSVLSDNFADVAPGVGEDTEVVLPWCPFGGWEYSRGEETPASAGNTGTSEAGGGRRDEFAPSLGAQEWENFAVAQKGA----VWMEGYVQGDQAVRRRLWRRV 595          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig258.7030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV86_ECTSI1.600e-12447.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig258contigH-paniculata_contig258:31113..38814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig258.7030.1mRNA_H-paniculata_contig258.7030.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig258 30971..39428 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig258.7030.1 ID=prot_H-paniculata_contig258.7030.1|Name=mRNA_H-paniculata_contig258.7030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=546bp
MATKNDAMDSNMQSASQTMCRDNRRRVGTVEVPGTNSLGSLEQSSHASSS
PSTTATMTTISAASLGPWPEGYSNSPPPPASPARDATLHSALAFLERRTR
ASTSAETPAIMRGTGADAGFGNLSGGMIAGGSGQDGFLSHWGDDSDPAGI
LDEDDDDNVCPSMLFSCLPCLVCLRPGKRRRSTVDGIKNRSRSQTSLTTP
LLTDRQGFPPPEFPKDVKLLEVEVESAKNVPVINMMNADQWSAASGRYVT
LQIRPLQEGVGEQTQQTCLARRVVHPRWVSIKEGHKETFTFFVTDTGASA
RAFLLICLMHRPYRPPSARLSTLPSSTAVDNSLSSEAALPSGAQAGDVVL
GKGFVDLLELFPTGGKGNLRRVAVPMEDPARKRRTTCAVMLGIRCRRVNE
SIDTREDRLYEYQRWTTVAGWSTTDGRDPGKWSTSDGSVFSDTFAGVAPP
AREDSEVVLPWCPFGGWEYSRGEEFSAATSSVADEIKNEYATNNGGGNGI
SMTKAKLGQKYPWVWTERPDSGGVRRRLWRRVYLDHRSAQAGKVE*
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