mRNA_H-paniculata_contig258.7029.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A6H5L486_9PHAE (TMP-TENI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L486_9PHAE) HSP 1 Score: 224 bits (571), Expect = 2.380e-65 Identity = 127/224 (56.70%), Postives = 156/224 (69.64%), Query Frame = 3
Query: 603 LNRPVLAQITPDGSCSSTTS--TRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAMR 1268
L P+L ITPDG SS+ S + L+ +I +AV GGV LVQLRDYK+ A+SK +LA RI + G +L VVN G+ R GADGVHLPER + L G + WP +VGCSVHS AA+EAARLGADYVQVGT+FATQSHPGK PEGV +L++VRR+L EGL VLV+GVGGI+ NCG +AAG DGVAAIRCLC S D + +A+ ++ MR
Sbjct: 100 LAPPLLELITPDGCASSSFSETSSLVKNIQKAVAGGVSLVQLRDYKSGAKSKADLAVRISTALKGR-ALFVVN---GEPDTARANGADGVHLPERMMDRLVGL-----RGQGEWPRIVGCSVHSVAAAVEAARLGADYVQVGTMFATQSHPGKTPEGVGMLNDVRRQLQVEGLDVVLVLGVGGIDASNCGDVVAAGGDGVAAIRCLCSSSDAEGQARRIVQDMR 314
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A836CN05_9STRA (Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN05_9STRA) HSP 1 Score: 168 bits (426), Expect = 5.970e-45 Identity = 108/218 (49.54%), Postives = 132/218 (60.55%), Query Frame = 3
Query: 612 PVLAQITPDGSCSSTTSTRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWP-AVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLG------RVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREA 1244
PVL ITPDGS + ST L I AV+GGV LVQ+RD + AESK LA ++ + P +V+N G CGA GVHLPER + + TR+ AVVGCSVHS AA+ AARLGADY+QVGT+FATQ+HPGK PEG LL+ +R L+ RVL++GVGGIN NC + + AG DGVAAIR LC +D D A
Sbjct: 42 PVLELITPDGSAAQP-STHLAQKIRAAVSGGVRLVQIRDTTSSAESKHALATQLLLDLAAEPCCIVLN---GGVDAALACGAHGVHLPERLLPEV---------TRAREALAVVGCSVHSVEAAVAAARLGADYLQVGTMFATQTHPGKVPEGPQLLAAIRAALNQAHARGELSDKRVLLLGVGGINEANCAQVIQAGGDGVAAIRSLCGADGSDPRA 246
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A7S3XPQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ6_HETAK) HSP 1 Score: 145 bits (367), Expect = 6.550e-36 Identity = 96/234 (41.03%), Postives = 124/234 (52.99%), Query Frame = 3
Query: 612 PVLAQITPDGSCSSTTSTR----LISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRV----------LVIGVGGINGENCGRAMAAGADGVAAIRCLCDSD---DGDREAKGMLDA 1262
P L ITP+G C+ S ++S I AV GGV LVQLRD A E + +RIR V+D S ++ +VN GD C ADGVHLPE ++ IN+ + V+GCSVHS+ AAL A + ADY+ VGT+F T SHPGK PEG L +++ + D LV GVGGI+G+NC + G DGVA I LC +D D E G + A
Sbjct: 4 PFLCLITPEGLCTEKYSEEAKRIILSRIGLAVEGGVSLVQLRDKTATREELATMGKRIRDVVDRSSAIFMVN---GDLDVAIACKADGVHLPEAQVQDF-----INSYKNKKFNGVLGCSVHSSEAALRAMEVKADYIVVGTMFKTNSHPGKVPEGPESLKKIKLDMLDHSQNTKDSNGAEEKLPLVCGVGGIDGDNCIEVLKNGGDGVAMISTLCFADRPKDKAEEVTGFMAA 229
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A8J2X006_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X006_9STRA) HSP 1 Score: 122 bits (305), Expect = 9.840e-26 Identity = 87/226 (38.50%), Postives = 116/226 (51.33%), Query Frame = 3
Query: 591 TDGI-LNRPVLAQITPDGSCSSTTSTRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAM 1265
TD + L R L +TP G ++ L A GG LVQLRD A + A +R + G+ +V+N G + HLPER+ A R P +GCS HS A L AA LGADYVQ+GT+FATQ+HPGK PEG L +E RR LD+ L+IGVGG++ N + + AG DGVA IR + D+ D + A+ + A+
Sbjct: 46 TDALHLPRRPLVFVTPPGWAAADRRADLERVARAAAKGGASLVQLRDADASRDELQSAAAAVRDALQGTDCSVVIN------------GVE--HLPERKWRA--------ATERPNGP--LGCSAHSVEAVLAAAALGADYVQLGTMFATQTHPGKIPEGPGLATECRRALDEREA-PPLLIGVGGVDATNAAKLIEAGCDGVAVIRGISDARDPEAAARAICRAL 246
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A3D1M0A4_9CHLR (Thiamine-phosphate synthase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A3D1M0A4_9CHLR) HSP 1 Score: 114 bits (285), Expect = 1.410e-25 Identity = 72/228 (31.58%), Postives = 119/228 (52.19%), Query Frame = 3
Query: 600 ILNRPVLAQITPDGSCSSTTSTRLISSIAR-AVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAMRITMV 1280
++N P+L +T TS R + I A++GGV ++Q RD A K+++AR +R++ + +V +GD ++ GADG+H PER+I N+ N ++G SVHS +A +A G +Y+ +GT+F + SHP G ++ E R + + +IG+GGI NC + M AGA G+A I + ++D R A +L+A+ + V
Sbjct: 5 MMNNPILCLVTNG----KRTSGRDLGFIVNEAISGGVNMIQFRDKDATEPEKLKMARNLRELAKDRAAFIV----NGDVDLAKEIGADGIHFPERQI-FDGPIDNLKENF------LIGKSVHSFESAAKATSEGMNYLMIGTIFPSASHPNGPVSGTGIIEESHRNIP------IPIIGIGGITEANCLQVMKAGAAGIAVIGAISEADSPKRAAHDILEALESSKV 211
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A2H5YM77_9BACT (Thiamine-phosphate synthase n=1 Tax=bacterium HR25 TaxID=2035420 RepID=A0A2H5YM77_9BACT) HSP 1 Score: 114 bits (284), Expect = 1.890e-25 Identity = 77/200 (38.50%), Postives = 110/200 (55.00%), Query Frame = 3
Query: 669 LISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAMR 1268
L + +ARAV GGV +VQLR+ A + LA +R+ +G SLLVVN + D + GADG+HLPER + + A + +VG SVHS A+ AA GADY+ VG+++AT+SHPG P G+ LL EV R+ + V+ +GGI E + AGA GVA I + + + A+ + A+R
Sbjct: 14 LTARVARAVAGGVDIVQLRERDMPAGELLSLALELREATEGR-SLLVVN-DRADVALAA--GADGLHLPERGLPVAAARRLLGEGR------LVGRSVHSLAEAVRAAEEGADYLVVGSIYATRSHPGASPAGLGLLREVAARVS------LPVLAIGGITAERVAEVVQAGASGVAVISAVLGQPEAEEAARRLGRALR 197
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A6L7Q5U4_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7Q5U4_9CHLR) HSP 1 Score: 112 bits (279), Expect = 1.920e-24 Identity = 87/221 (39.37%), Postives = 115/221 (52.04%), Query Frame = 3
Query: 603 LNRPVLAQITPDGSCSSTTSTRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAM 1265
L P L +T C L +A AV GGV LVQLRD +A +E A +R++I G LLV D + GADGV L E + + A T AV+G SVHS AL AA GAD++ VGT+FAT+SHPG+EP G LLS R+ G+ + ++G+GGI EN MA+GA G A I + S+D + A+ + AM
Sbjct: 5 LPYPCLCLVTDRTVCPPD---ELPQRVAAAVAGGVDLVQLRDKEAPGGVLLEQAWDLREIIQGRALLLVNERADVALA----AGADGVQLGEMALPVD------EARTILGPGAVIGRSVHSVPGALHAAVNGADFLLVGTMFATRSHPGEEPSGPGLLS----RIASAGVA-IPMLGIGGITAENVAEVMASGASGAAVITGILASEDPETAARRLKSAM 207
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A2H5YGE0_9BACT (Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YGE0_9BACT) HSP 1 Score: 111 bits (277), Expect = 2.240e-24 Identity = 80/200 (40.00%), Postives = 109/200 (54.50%), Query Frame = 3
Query: 669 LISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPA-VVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAM 1265
L + ARAV GGV +VQLR+ A + LA +R I G +LLVVN + D + GADGVHLPE + + R + PA +VG SVHS AA+ A GADY+ VG ++ T+SHP G LLS+VRR + RV V+ +GG+ +AAGA GVA I + S+D + A+G+ A+
Sbjct: 27 LPQAAARAVAGGVNIVQLREKDLPARDLLALAAALRAAIAGR-ALLVVN-DRADVALAA--GADGVHLPEDGLPVAKA-------RRLVGPARLVGRSVHSVDAAVRAEADGADYIVVGPIYPTRSHPDAPAAGPGLLSQVRRAV------RVPVLAIGGVTAATAAEXLAAGASGVAVISAILGSEDPEAAARGLRSAL 209
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A2E4QJS0_9CHLR (TMP-TENI domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2E4QJS0_9CHLR) HSP 1 Score: 110 bits (276), Expect = 2.340e-24 Identity = 68/207 (32.85%), Postives = 116/207 (56.04%), Query Frame = 3
Query: 600 ILNRPVLAQITPDGSCSSTTSTRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCD 1220
+L+ P+L+ IT + +++++I + GV +VQ+R+ E K +L ++I D P ++ INDG Y + DG+HLPE++I + N + + ++GCSVHS +A+ A +LGA+Y+Q G++F T+SHPG+ P G++ L ++ ++ + VI VGGIN +NC GA G+A+IR +
Sbjct: 3 LLSFPILSLITDSSVYQN--KEKMVNNITQTTKVGVNMVQIREKNLSNEEKKKLIQKIIVKTDNKP---IIIINDG-YELCKVFDIDGIHLPEKKINQIK-----NLKSTLKYDQIIGCSVHSLKSAILAEKLGANYLQFGSIFKTKSHPGQNPLGLSELKKITANIN------LPVIAVGGINEKNCLLPFQNGAYGIASIRSFSE 192
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A2D9ZQG9_9CHLR (Thiamine-phosphate synthase n=4 Tax=root TaxID=1 RepID=A0A2D9ZQG9_9CHLR) HSP 1 Score: 109 bits (273), Expect = 6.050e-24 Identity = 70/220 (31.82%), Postives = 118/220 (53.64%), Query Frame = 3
Query: 600 ILNRPVLAQITPDGSCSSTTSTRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLD 1259
I P+L +T T+ L S +++AV GGV ++Q RD ++ A ++R++ + S +L +VN GD + ADG+H PE+ + A + N ++G SVHS A++A G DY+ VGT+F ++SHP + G L+ ++ R+L V +IG+GGI+ +NC + +GA GVA I + ++DD E++ +L+
Sbjct: 5 IQKXPLLCLVTXRN---RTSQRGLESVVSQAVEGGVNMIQFRDTDMHXTERLHXAVKLREITE-SKALFIVN---GDIDLAKKAXADGIHFPEKHV-XXADTEKLKENF------ILGKSVHSLEMAIKAVSAGIDYLIVGTIFPSKSHPQGQASGTKLIEDISRKLS------VPLIGIGGISSKNCQEVIDSGASGVAVIGAISEADDPKLESRIILE 204 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig258.7029.1 >prot_H-paniculata_contig258.7029.1 ID=prot_H-paniculata_contig258.7029.1|Name=mRNA_H-paniculata_contig258.7029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=321bp MLSTSGTFQILNVVAYLVVNVVQLPVVTVQTAHAPVPAPRFLHKPGRLGGback to top mRNA from alignment at H-paniculata_contig258:28278..30942- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig258.7029.1 ID=mRNA_H-paniculata_contig258.7029.1|Name=mRNA_H-paniculata_contig258.7029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2665bp|location=Sequence derived from alignment at H-paniculata_contig258:28278..30942- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig258:28278..30942- >mRNA_H-paniculata_contig258.7029.1 ID=mRNA_H-paniculata_contig258.7029.1|Name=mRNA_H-paniculata_contig258.7029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1926bp|location=Sequence derived from alignment at H-paniculata_contig258:28278..30942- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |