mRNA_H-paniculata_contig258.7027.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig258.7027.1
Unique NamemRNA_H-paniculata_contig258.7027.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig258.7027.1 vs. uniprot
Match: A0A6H5LJB3_9PHAE (Hist_deacetyl domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJB3_9PHAE)

HSP 1 Score: 493 bits (1268), Expect = 1.050e-172
Identity = 244/335 (72.84%), Postives = 277/335 (82.69%), Query Frame = 1
Query:    1 STGGEVYEEFPPLVYHERYSADPWPEKHSFPMSKFTDLAQLLREEDGPLGTRGPMAMKGAFRPMDRPPHEWFEAVHDAEYYRAFLDGSLDEKAMRRRAEKHTYCKARWRRALVDRTLLEASGTALAARLALRFGLACNLAGGTHHAHKGFGSGYTILNDLAVAAKVVQADGTAHKVTVIDCDVHQGDGTAAIFAKDPSVRTVSFHCQDNFPSHKPESDIDVGFPAGVEDRDLMLELQRVIPEELKHNTPDLVLYDAGVDMHAGDRLGKMNISDQGLLDRDFFVIRSCLDMGIPVACVVGGGYDADRRVLAGRHALVFKAAFQAWRGLGARRSRWR 1005
            S GG V+++ PPLVYHERYSADPWP KHSFPMSKF DLA+LL + +GPLG  GP+AMKGAFRPMDRPPH+WFEAVHD  YYRAF+ G+LD K +RR    +T         LVDRTLLE SGT LAARLAL+FGLACNLAGGTHHAHKGFGSGYTILNDLAVA++VVQADGTA KVT++DCDVHQGDGTA IFA D SVRT+SFHCQDNFP+ KP SDIDVGFP G  D DL+  L+RV+P+E     PDLVLYDAGVDMHAGDRLGKM ++D+GLL RD++VI +CLDMG+PVACVVGGGYD+DR VLA RH+ VFKAAFQAWR    R + WR
Sbjct:   40 SLGGIVHKDLPPLVYHERYSADPWPPKHSFPMSKFRDLAELLADTNGPLGDEGPVAMKGAFRPMDRPPHKWFEAVHDPLYYRAFVGGTLDGKVIRRIGLPYT-------EPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPDEFAEYPPDLVLYDAGVDMHAGDRLGKMLLTDEGLLARDYYVISTCLDMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAWRDFDMR-TNWR 366          
BLAST of mRNA_H-paniculata_contig258.7027.1 vs. uniprot
Match: A0A8J6CHI7_DIALT (Hist_deacetyl domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHI7_DIALT)

HSP 1 Score: 319 bits (817), Expect = 4.630e-105
Identity = 170/313 (54.31%), Postives = 206/313 (65.81%), Query Frame = 1
Query:   34 PLVYHERYSADPWPEKHSFPMSKFTDLAQLLREEDGPLGTRGPMAMKGAFRPMDRPPHEWFEAVHDAEYYRAFLDGSLDEKAMRRRAEKHTYCKARWRRALVDRTLLEASGTALAARLALRFGLACNLAGGTHHAHKGFGSGYTILNDLAVAAKVVQADGTAHKVTVIDCDVHQGDGTAAIFAKDPSVRTVSFHCQDNFPSHKPESDIDVGFPAGVEDRDLMLELQRVIPEELKHNTPDLVLYDAGVDMHAGDRLGKMNISDQGLLDRDFFVIRSCLDMGIPVACVVGGGYDADRRVLAGRHALVFKAAFQAW 972
            PLVYH +YS +PWP  H F MSKF DL   L      LG RG    +    P+D PP EWF AVHDA+YY  F DG+L   AMRR   +       W   LV+RT LE +GT LAARLAL  GLACNL GGTHHAH+ FGSG+TILNDLAV+A+ VQ  G A +V ++D DVHQGDGTA+IFA DP+V T+SFHC  NFP  K  SD+D+  P G  D   +  L  V+P  L+   PDLVLYDAGVD+ A D LG +++SD G+  RD +V+R+C   G+PVA V+GGGY  D   LA RHA+VF+AA   W
Sbjct:    9 PLVYHAKYSFEPWPAAHRFRMSKFVDLHDHL------LG-RGIATKEQLHAPIDDPPDEWFTAVHDADYYFGFTDGTLPAPAMRRIGFE-------WSAQLVERTRLECAGTVLAARLALEHGLACNLGGGTHHAHRDFGSGFTILNDLAVSARYVQNTGLAARVLIVDLDVHQGDGTASIFASDPTVYTLSFHCGKNFPFRKSRSDLDIDLPPGTSDDAYLARLADVLPRVLQVAEPDLVLYDAGVDVAAVDTLGYLDLSDDGIYQRDEYVLRTCRAAGLPVATVIGGGYCTDLDELASRHAIVFRAAQAVW 307          
BLAST of mRNA_H-paniculata_contig258.7027.1 vs. uniprot
Match: A0A6V1V0D3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V0D3_HETAK)

HSP 1 Score: 318 bits (815), Expect = 7.110e-104
Identity = 171/326 (52.45%), Postives = 211/326 (64.72%), Query Frame = 1
Query:   31 PPLVYHERYSADPWPEKHSFPMSKFTDLAQLLREEDGPLGTRGPMAMKGA-FRPMDRPPHEWFEAVHDAEYYRAFLDGSLDEKAMRRRAEKHTYCKARWRRALVDRTLLEASGTALAARLALRFGLACNLAGGTHHAHKGFGSGYTILNDLAVAAKVVQADGTA-HKVTVIDCDVHQGDGTAAIFAKDPSVRTVSFHCQDNFPSHKPESDIDVGFPAGVEDRDLMLELQRVIPEELKHNTPDLVLYDAGVDMHAGDRLGKMNISDQGLLDRDFFVIRSCLDMGIPVACVVGGGYDADRRVLAGRHALVFKAAFQAWRGLGARRSRW 1002
            PP VYH  YS  PWP  H FPM KF  L ++L ++         +  +G  F P+D PPHEWF  VHD  YY+ FLD +L     RR          R    LV RT LE +GT L A+LAL+ GLACNLAGGTHHAHKG+GSGYTILNDLA+ AKV+Q       KV ++D DVHQGDGTA+IF  DPSV T S HC++NFP  K  SD+DVG P G +D++ M  LQ  +   L     DLVLYDAG+D + GDRLG +NIS++GL DRD   IR+CL  G+PVACV+GGGYD +   LA RH++V +AA +AWR +G  +  W
Sbjct:   62 PPFVYHPEYSC-PWPSNHRFPMWKFKGLFEVLCKDH--------IIREGEYFVPLDDPPHEWFTLVHDERYYKGFLDNTLTNDEWRR-------IGFRPGPGLVRRTRLEVAGTLLTAQLALQHGLACNLAGGTHHAHKGYGSGYTILNDLAITAKVLQESNIGVEKVLIVDLDVHQGDGTASIFEGDPSVFTFSMHCENNFPLRKMRSDLDVGLPPGTDDQEYMRVLQSNLERVLDEFPADLVLYDAGIDPYEGDRLGLLNISERGLYDRDSHTIRTCLGRGLPVACVIGGGYDDNAAALARRHSIVHRAAVRAWREMGVGKLVW 371          
BLAST of mRNA_H-paniculata_contig258.7027.1 vs. uniprot
Match: A0A0G4EFS8_VITBC (Hist_deacetyl domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EFS8_VITBC)

HSP 1 Score: 313 bits (802), Expect = 1.430e-100
Identity = 164/314 (52.23%), Postives = 201/314 (64.01%), Query Frame = 1
Query:   31 PPLVYHERYSADPWPEKHSFPMSKFTDLAQLLREEDGPLGTRGPMAMKGAFRPMDRPPHEWFEAVHDAEYYRAFLDGSLDEKAMRRRAEKHTYCKARWRRALVDRTLLEASGTALAARLALRFGLACNLAGGTHHAHKGFGSGYTILNDLAVAAKVVQADGTAHKVTVIDCDVHQGDGTAAIFAKDPSVRTVSFHCQDNFPSHKPESDIDVGFPAGVEDRDLMLELQRVIPEELKHNTPDLVLYDAGVDMHAGDRLGKMNISDQGLLDRDFFVIRSCLDMGIPVACVVGGGYDADRRVLAGRHALVFKAAFQAW 972
            PP VYH  Y+   WP  H F M KF  L + L E+ G          +  F      P  W   VH+  Y  AF++G+LD   +RR           W   LV RTLLE SGT L A+LA+ FGLACNL GGTHHAH  +GSG+TI NDLAVAAKV+Q    A+K+ ++D DVHQGDGTAA+FA DPSV T+SFHC+ NFP  K +SD+DV F AG  D   +  L+RV+P  L    PDLVLYDAGVD+ AGD+LG++ IS++GL DRD FVI +C+D  +PVACV+GGGYD DR  LA RHA+V K A   W
Sbjct:  150 PPFVYHPEYTCPSWPSVHRFKMWKFAALHRHLIEQQG--------VSRDCFFIPPELPEAWLMMVHEPGYVGAFIEGTLDPMKLRRIGFP-------WSPPLVRRTLLEVSGTILTAQLAVEFGLACNLGGGTHHAHWDWGSGFTIFNDLAVAAKVIQQQKRANKILIVDLDVHQGDGTAALFANDPSVFTLSFHCEKNFPFRKQKSDLDVSFAAGTGDEQFLDTLRRVLPSLLSSERPDLVLYDAGVDVWAGDKLGELQISERGLADRDRFVIETCMDAHVPVACVIGGGYDDDRHKLAARHAIVHKVASSVW 448          
BLAST of mRNA_H-paniculata_contig258.7027.1 vs. uniprot
Match: A0A7S4BJF7_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BJF7_CHRCT)

HSP 1 Score: 298 bits (764), Expect = 5.760e-97
Identity = 164/314 (52.23%), Postives = 202/314 (64.33%), Query Frame = 1
Query:   34 PLVYHERYSADPWPEKHSFPMSKFTDLAQLLREEDGPLGTRGPMAMKGAFRPMDRPPHEWFEAVHDAEYYRAFLDGSLDEKAMRRRAEKHTYCKARWRRALVDRTLLEASGTALAARLALRFGLACNLAGGTHHAHKGFGSGYTILNDLAVAAKVVQADGTAHKVTVIDCDVHQGDGTAAIFAKDPSVRTVSFHCQDNFPSHKPESDIDVGFPAGVEDRDLMLELQRVIPEELKHNTPDLVLYDAGVDMHAGDRLGKMNISDQGLLDRDFFVIRSCLDMGIPVACVVGGGYDADRRVLAGRHALVFKAAFQAWR 975
            PLVYH RYSA PWP  H FPM KF+DL   ++        R  +A   ++   + P H WFEAVHD  YYR+F++G L E+  RR   ++   K     AL+DRT LE +GT L A+LAL  GLACNLAGGTHHAH+ FGSG+TILNDLAVAA  ++A     +V ++D DVHQGDGTAAIFA +P V T+S HC  NFP  K  SD+DV    G  D D  L L R   E++    PDLVLYDAGVD+HA D LG +N+S  G+  RD  VI  CL   +PVACV+GGGY  D   LA RHA+V +AA  A++
Sbjct:   12 PLVYHARYSA-PWPRTHRFPMWKFSDLHAFIK--------RTGLASAASWHEPELPDHAWFEAVHDPVYYRSFIEGRLGEEQERRIGFRNEMRKP----ALIDRTRLECAGTVLTAQLALEHGLACNLAGGTHHAHRSFGSGFTILNDLAVAAARIRATTEVRRVAIVDLDVHQGDGTAAIFADEPDVFTMSMHCGKNFPFRKQVSDLDVDVEVGTGDIDY-LRLLRGALEQVFAFKPDLVLYDAGVDVHADDELGHLNLSHAGIWQRDSMVIDRCLSANVPVACVIGGGYHRDPLTLARRHAIVHRAAAHAFK 311          
BLAST of mRNA_H-paniculata_contig258.7027.1 vs. uniprot
Match: A0A1C0VLD4_9CYAN (Histone deacetylase n=3 Tax=Limnothrix TaxID=132605 RepID=A0A1C0VLD4_9CYAN)

HSP 1 Score: 296 bits (757), Expect = 4.750e-96
Identity = 160/311 (51.45%), Postives = 192/311 (61.74%), Query Frame = 1
Query:   34 PLVYHERYSADPWPEKHSFPMSKFTDLAQLLREEDGPLGTRGPMAMKGAFRPMDRPPHEWFEAVHDAEYYRAFLDGSLDEKAMRRRAEKHTYCKARWRRALVDRTLLEASGTALAARLALRFGLACNLAGGTHHAHKGFGSGYTILNDLAVAAKVVQADGTAHKVTVIDCDVHQGDGTAAIFAKDPSVRTVSFHCQDNFPSHKPESDIDVGFPAGVEDRDLMLELQRVIPEELKHNTPDLVLYDAGVDMHAGDRLGKMNISDQGLLDRDFFVIRSCLDMGIPVACVVGGGYDADRRVLAGRHALVFKAAFQ 966
            PLVYH  Y A P P  H FPM KF  L   LR +    GT  P      F   DRPP +W E VHD  Y  A+  G+LD KA RR           W  AL +RT + A GT L ARLALR GLACNLAGGTHHA   FGSG+ I NDLA+A +V+QA+G   +V ++D DVHQGDGTA IF  +P V T S HC+ NFP+ K  SD+DV  P G+ED D +  L R +P+ L    PDLV+YDAGVD H GDRLGK+ ++D GL  RD  V+ +C+  G PVAC +GGGY  D   L  RHAL+ +AA Q
Sbjct:    4 PLVYHPDYVA-PLPPGHRFPMQKFARLYDRLRSD----GTATPEQ----FHQPDRPPQDWIELVHDRAYVEAYCQGTLDPKAQRR-------IGLPWSPALANRTCVAAGGTVLTARLALRHGLACNLAGGTHHAFPDFGSGFCIFNDLAIATRVLQAEGLVDRVLIVDLDVHQGDGTAWIFRNEPQVFTFSMHCEANFPARKQASDLDVALPEGMEDDDYLQTLDRFLPDLLAQVRPDLVIYDAGVDPHGGDRLGKLALTDSGLFRRDMQVLTTCVAAGYPVACTIGGGYCDDLAALVDRHALIHRAAAQ 298          
BLAST of mRNA_H-paniculata_contig258.7027.1 vs. uniprot
Match: K9VMN9_9CYAN (Histone deacetylase n=4 Tax=Oscillatoriales TaxID=1150 RepID=K9VMN9_9CYAN)

HSP 1 Score: 288 bits (736), Expect = 7.130e-93
Identity = 156/314 (49.68%), Postives = 198/314 (63.06%), Query Frame = 1
Query:   34 PLVYHERYSADPWPEKHSFPMSKFTDLAQLLREEDGPLGTRGPMAMKGAFRPMDRPPHEWFEAVHDAEYYRAFLDGSLDEKAMRRRAEKHTYCKARWRRALVDRTLLEASGTALAARLALRFGLACNLAGGTHHAHKGFGSGYTILNDLAVAAKVVQADGTAHKVTVIDCDVHQGDGTAAIFAKDPSVRTVSFHCQDNFPSHKPESDIDVGFPAGVEDRDLMLELQRVIPEELKHNTPDLVLYDAGVDMHAGDRLGKMNISDQGLLDRDFFVIRSCLDMGIPVACVVGGGYDADRRVLAGRHALVFKAAFQAWR 975
            P++YHE Y A P P  H FPM+KF  L Q+L   DG       +A K  F   + PP EW E VHD  Y +A+ +G+LD KA RR           W RAL +RT    +GT L A+LAL  GLACN AGGTHHA   FGSG+ I NDLA+A++V+Q  G   KV ++D DVHQGDGTA IF  D SV T S HC+ NFP  K + D+DV  P G+ED + +  L + +P+ L    PDLVLYDAGVD H GD+LGK+ ++D GL  R+  V+ +CL  G PVACV+GGGY  D + L  RH+L+ +AA QA+R
Sbjct:    4 PIIYHEDYVA-PLPPNHRFPMAKFRMLYQMLLA-DG-------VADKSQFHAPELPPQEWIELVHDHCYVQAYCNGTLDNKAQRR-------IGLPWSRALANRTCTAVAGTVLTAKLALDCGLACNTAGGTHHAFPAFGSGFCIFNDLAIASRVLQKSGLVRKVLIVDLDVHQGDGTAVIFQDDSSVFTFSMHCEVNFPGTKQKGDLDVPLPVGMEDDEYLQTLDKFLPDLLSSVKPDLVLYDAGVDPHQGDKLGKLALTDTGLFRREMQVLMACLAGGYPVACVIGGGYSDDAKGLVYRHSLLHRAASQAYR 301          
BLAST of mRNA_H-paniculata_contig258.7027.1 vs. uniprot
Match: A0A2T1FDA4_9CYAN (Histone deacetylase n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A2T1FDA4_9CYAN)

HSP 1 Score: 285 bits (728), Expect = 1.160e-91
Identity = 154/314 (49.04%), Postives = 198/314 (63.06%), Query Frame = 1
Query:   34 PLVYHERYSADPWPEKHSFPMSKFTDLAQLLREEDGPLGTRGPMAMKGAFRPMDRPPHEWFEAVHDAEYYRAFLDGSLDEKAMRRRAEKHTYCKARWRRALVDRTLLEASGTALAARLALRFGLACNLAGGTHHAHKGFGSGYTILNDLAVAAKVVQADGTAHKVTVIDCDVHQGDGTAAIFAKDPSVRTVSFHCQDNFPSHKPESDIDVGFPAGVEDRDLMLELQRVIPEELKHNTPDLVLYDAGVDMHAGDRLGKMNISDQGLLDRDFFVIRSCLDMGIPVACVVGGGYDADRRVLAGRHALVFKAAFQAWR 975
            P++YHE Y A P P  H FPM+KF  L Q+L   DG       +A +  F   + PP EW E VHD  Y +A+ +G+LD KA+RR           W RAL +RT +  +GT L A+LAL +GLACN AGGTHHA  GFGSG+ I NDLA+A++V+Q  G   +V +ID DVHQGDGTA IF  D SV T S HCQ NFP  K +SD+DV    G+ED + +  L + +P+ L    PDLVLYDAGVD H  D+LGK+ ++D GL  R+  V+ +C   G PVACV+GGGY  D   L  RH+L+ +AA Q +R
Sbjct:    4 PIIYHEDYVA-PLPPGHRFPMAKFGMLYQMLIA-DG-------VADRSQFHAPELPPQEWIELVHDRHYVQAYCNGTLDAKAIRR-------IGLPWSRALANRTFIAVAGTVLTAKLALEYGLACNTAGGTHHAFPGFGSGFCIFNDLAIASRVLQQLGLVRQVLIIDLDVHQGDGTAVIFQDDQSVFTFSMHCQVNFPGTKQKSDLDVHLSEGIEDDEYLQTLAKYLPDLLSDVKPDLVLYDAGVDPHQADKLGKLALTDTGLFRREMQVLSTCCSGGYPVACVIGGGYSDDMNGLVYRHSLLHRAASQTYR 301          
BLAST of mRNA_H-paniculata_contig258.7027.1 vs. uniprot
Match: A0A251WAJ7_9CYAN (Histone deacetylase n=2 Tax=unclassified Alkalinema TaxID=2635015 RepID=A0A251WAJ7_9CYAN)

HSP 1 Score: 284 bits (727), Expect = 1.640e-91
Identity = 153/314 (48.73%), Postives = 192/314 (61.15%), Query Frame = 1
Query:   34 PLVYHERYSADPWPEKHSFPMSKFTDLAQLLREEDGPLGTRGPMAMKGAFRPMDRPPHEWFEAVHDAEYYRAFLDGSLDEKAMRRRAEKHTYCKARWRRALVDRTLLEASGTALAARLALRFGLACNLAGGTHHAHKGFGSGYTILNDLAVAAKVVQADGTAHKVTVIDCDVHQGDGTAAIFAKDPSVRTVSFHCQDNFPSHKPESDIDVGFPAGVEDRDLMLELQRVIPEELKHNTPDLVLYDAGVDMHAGDRLGKMNISDQGLLDRDFFVIRSCLDMGIPVACVVGGGYDADRRVLAGRHALVFKAAFQAWR 975
            PL+YH  Y   P P  H FPM+KF +L   L         R  +A    F   DRPP  W E +HD++Y  A+  G+LD KA RR           W  ALV+RT     GT L A+LAL+ GLACN AGGTHHA    GSG+ I NDLA+AA+ +Q  G  HKV ++D DVHQGDGTA IF  D SV T S HC+ NFP  K +SD+DV   AG+ED + +  L R +P+ L H  PDLVLYDAG+D H  DRLGK+N++D GL  R+  V+ +CL +G PVACV+GGGY  D   L  RH+L+ +AA   +R
Sbjct:    4 PLIYHPDYVV-PLPIGHRFPMAKFKNLYDCL--------LRDGVATIEQFHQPDRPPSPWIELIHDSDYVNAYCTGTLDAKAQRR-------IGLPWSPALVNRTCTAVGGTILTAQLALKTGLACNTAGGTHHAFPAHGSGFCIFNDLAIAARYLQQIGLVHKVLIVDLDVHQGDGTAFIFQNDESVFTFSMHCEINFPGTKQKSDLDVPLRAGMEDDEYLQTLDRYLPDLLTHVKPDLVLYDAGIDPHLDDRLGKLNLTDTGLYRREMQVLTTCLSLGCPVACVIGGGYSEDMNALVYRHSLLHRAASNVYR 301          
BLAST of mRNA_H-paniculata_contig258.7027.1 vs. uniprot
Match: A0A6H1TUQ5_9CYAN (Histone deacetylase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1TUQ5_9CYAN)

HSP 1 Score: 284 bits (727), Expect = 1.640e-91
Identity = 154/313 (49.20%), Postives = 195/313 (62.30%), Query Frame = 1
Query:   34 PLVYHERYSADPWPEKHSFPMSKFTDLAQLLREEDGPLGTRGPMAMKGAFRPMDRPPHEWFEAVHDAEYYRAFLDGSLDEKAMRRRAEKHTYCKARWRRALVDRTLLEASGTALAARLALRFGLACNLAGGTHHAHKGFGSGYTILNDLAVAAKVVQADGTAHKVTVIDCDVHQGDGTAAIFAKDPSVRTVSFHCQDNFPSHKPESDIDVGFPAGVEDRDLMLELQRVIPEELKHNTPDLVLYDAGVDMHAGDRLGKMNISDQGLLDRDFFVIRSCLDMGIPVACVVGGGYDADRRVLAGRHALVFKAAFQAW 972
            P++YH  Y A P PE H FPM+KF  L +LL +++        +A +  F   + PP +W E VH   Y +A+  G+LD KA RR           W  AL +RT     GT L A+LAL  GLACN AGGTHHA   FGSG+ I NDLA+AA+V+Q  G   KV ++D DVHQGDGTA IF  DPSV T S HC+ NFPS K  SD+DV  P G+ED + +  L + +P+ L    PDLVLYDAGVD HAGDRLGK+ +SD G+  RD  V+ +C+  G PVACV+GGGY  D   L  RH+L+ +AA Q +
Sbjct:    4 PIIYHPDYVA-PLPEGHRFPMAKFGLLYELLLKDN--------LAHRWQFHEPELPPTDWIEFVHTPSYVQAYCKGTLDPKARRR-------IGLPWSAALANRTCRAVGGTILTAKLALSRGLACNNAGGTHHAFPDFGSGFCIFNDLAIAARVLQKSGMVSKVLIVDLDVHQGDGTAFIFRDDPSVFTFSMHCEANFPSRKQPSDLDVALPVGMEDDEYLQTLAKYLPDILSRVKPDLVLYDAGVDPHAGDRLGKLALSDTGIFRRDMQVLSTCIAQGYPVACVIGGGYADDMTDLVYRHSLLHRAAAQVF 300          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig258.7027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LJB3_9PHAE1.050e-17272.84Hist_deacetyl domain-containing protein n=2 Tax=Ec... [more]
A0A8J6CHI7_DIALT4.630e-10554.31Hist_deacetyl domain-containing protein n=2 Tax=Di... [more]
A0A6V1V0D3_HETAK7.110e-10452.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4EFS8_VITBC1.430e-10052.23Hist_deacetyl domain-containing protein n=2 Tax=Vi... [more]
A0A7S4BJF7_CHRCT5.760e-9752.23Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A1C0VLD4_9CYAN4.750e-9651.45Histone deacetylase n=3 Tax=Limnothrix TaxID=13260... [more]
K9VMN9_9CYAN7.130e-9349.68Histone deacetylase n=4 Tax=Oscillatoriales TaxID=... [more]
A0A2T1FDA4_9CYAN1.160e-9149.04Histone deacetylase n=2 Tax=unclassified Cyanobact... [more]
A0A251WAJ7_9CYAN1.640e-9148.73Histone deacetylase n=2 Tax=unclassified Alkalinem... [more]
A0A6H1TUQ5_9CYAN1.640e-9149.20Histone deacetylase n=3 Tax=Cyanobacteria TaxID=11... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig258contigH-paniculata_contig258:20229..22801 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score505.0
Seed ortholog evalue2.7e-140
Seed eggNOG ortholog2880.D7FV83
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein deacetylase activity
EggNOG OGsCOG0123@1,KOG1344@2759
Ec32 ortholog descriptionHistone deactylase
Ec32 orthologEc-14_000150.1
COG Functional cat.BQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1008
Cds size1008
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929766.131335-CDS-H-paniculata_contig258:20228..204191622929766.131335-CDS-H-paniculata_contig258:20228..20419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 20229..20419 -
1691481001.577902-CDS-H-paniculata_contig258:20228..204191691481001.577902-CDS-H-paniculata_contig258:20228..20419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 20229..20419 -
1622929766.1461158-CDS-H-paniculata_contig258:20718..207721622929766.1461158-CDS-H-paniculata_contig258:20718..20772Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 20719..20772 -
1691481001.5999906-CDS-H-paniculata_contig258:20718..207721691481001.5999906-CDS-H-paniculata_contig258:20718..20772Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 20719..20772 -
1622929766.1580925-CDS-H-paniculata_contig258:20912..210301622929766.1580925-CDS-H-paniculata_contig258:20912..21030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 20913..21030 -
1691481001.6092577-CDS-H-paniculata_contig258:20912..210301691481001.6092577-CDS-H-paniculata_contig258:20912..21030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 20913..21030 -
1622929766.172684-CDS-H-paniculata_contig258:21384..215041622929766.172684-CDS-H-paniculata_contig258:21384..21504Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 21385..21504 -
1691481001.618072-CDS-H-paniculata_contig258:21384..215041691481001.618072-CDS-H-paniculata_contig258:21384..21504Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 21385..21504 -
1622929766.1923106-CDS-H-paniculata_contig258:21705..217721622929766.1923106-CDS-H-paniculata_contig258:21705..21772Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 21706..21772 -
1691481001.6270866-CDS-H-paniculata_contig258:21705..217721691481001.6270866-CDS-H-paniculata_contig258:21705..21772Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 21706..21772 -
1622929766.204433-CDS-H-paniculata_contig258:22170..222971622929766.204433-CDS-H-paniculata_contig258:22170..22297Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 22171..22297 -
1691481001.6372728-CDS-H-paniculata_contig258:22170..222971691481001.6372728-CDS-H-paniculata_contig258:22170..22297Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 22171..22297 -
1622929766.2187893-CDS-H-paniculata_contig258:22470..228011622929766.2187893-CDS-H-paniculata_contig258:22470..22801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 22471..22801 -
1691481001.6459002-CDS-H-paniculata_contig258:22470..228011691481001.6459002-CDS-H-paniculata_contig258:22470..22801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 22471..22801 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig258.7027.1prot_H-paniculata_contig258.7027.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig258 20229..22801 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig258.7027.1

>prot_H-paniculata_contig258.7027.1 ID=prot_H-paniculata_contig258.7027.1|Name=mRNA_H-paniculata_contig258.7027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=336bp
STGGEVYEEFPPLVYHERYSADPWPEKHSFPMSKFTDLAQLLREEDGPLG
TRGPMAMKGAFRPMDRPPHEWFEAVHDAEYYRAFLDGSLDEKAMRRRAEK
HTYCKARWRRALVDRTLLEASGTALAARLALRFGLACNLAGGTHHAHKGF
GSGYTILNDLAVAAKVVQADGTAHKVTVIDCDVHQGDGTAAIFAKDPSVR
TVSFHCQDNFPSHKPESDIDVGFPAGVEDRDLMLELQRVIPEELKHNTPD
LVLYDAGVDMHAGDRLGKMNISDQGLLDRDFFVIRSCLDMGIPVACVVGG
GYDADRRVLAGRHALVFKAAFQAWRGLGARRSRWR*
back to top

mRNA from alignment at H-paniculata_contig258:20229..22801-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig258.7027.1 ID=mRNA_H-paniculata_contig258.7027.1|Name=mRNA_H-paniculata_contig258.7027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2573bp|location=Sequence derived from alignment at H-paniculata_contig258:20229..22801- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTACGGGCGGAGAGGTGTACGAAGAGTTTCCACCCTTGGTGTATCATGA GCGATATAGCGCGGATCCATGGCCTGAAAAACACAGCTTCCCGATGTCCA AATTCACGGACCTGGCACAGCTGCTGAGAGAAGAAGATGGCCCGTTGGGC ACGCGCGGACCAATGGCAATGAAGGGAGCTTTCCGCCCGATGGACCGGCC ACCGCACGAATGGTTCGAGGCTGTGCACGACGCAGAATACTACCGGGCAT TTTTGGATGGGAGTCTGGACGAAAAGGCCATGCGAAGGCGAGCAGAGAAA CACACATATTGCAAGGCACGATGGCGCCGAGGTTGAACATCCATTCAAGT CTGTGTGTGGACCCCCAACGCCGACCATCCATTCAACCAAACAGTCGGCT GGGATTCTTAGCATTGCACCTATGTGACTATCTTAGCTTCACGCTCATTT CTGTGCGTACCCAATACCCAACTGCCATCAGGATTGGTCTTCCGTACAGT GAAGCTCTGGTTGACCGCACTCTGCTGGAAGCGTCAGGGACTGCCCTGGC CGCGCGTCTTGCTCTTCGCTTTGGTCTGGCGTGTAATCTCGCTGGTGGAA CGCATCATGCGCACAAGGGGTTCGGCAGTGGGTGAGCGATCCCCAGTTCC TGTGCTTTAACCATAACATAGACCCAACTACCAATTGACGTAAAAGAATG AGAGCTGAGCAAGTTCGATGTATTGCATGAGACACGGGAAAGAAGTCTAG TGCACTATGTCAGAGTAATCCCGTGCGTCCCTGCACACGAAAGATATGGG CTAGTACACGTGGCCATCTGTACACGATGGTGGTCTAAACGACTATTCCC CGAGACCGGAGTGATCAGAGAAGTCTATTGCTGCACAATTGTCACGTAAA TGAAGGTCAAGGTCGTACGTAGACGCGGTTACCTCGATTAATCGAGAACA CTAGGATACCTGTCGAGCACGTGAAGTCCTCTCCTCCCTTGTGATCCGTT TTTTTGTTTGTCTCTGTCACGTCGTACAGCTACACAATTCTGAACGATTT AGCGGTGGCGGCAAAGGTCGTACAGGCCGACGGCACGGCACACAAGGTCA GGAGGTGTGTCGGGGTATATAGTGATTATAGCAGAGCACCGGAACAGCGG GCAATAGCAAGTGTATACTTGAGTGTAACAGTAGCTGGATATATCATTGA AGGAATGTTGTTGCTAGTACACCGTGTCTGAGTTACGCACTTGGGTTTCC CTCGACATATTCCCCACCGCATCGTGCTTGACCCTTACAAACGGCAGGTG ACGGTGATAGACTGCGACGTTCACCAAGGAGATGGTACAGCTGCGATATT TGCCAAGGACCCCTCCGTCCGCACGGTCTCCTTTCATTGTCAAGATAACT TTCCCTCCCATAAGCCGGTGACTATCTTGCTTCTCTTGTGATATGAGTAA GATTGTGTTTATACTTAATACCTTAACACGCTCGGGCGGGATACGCAGGA GCACTCTCTCATATAGAGGACATAGTGGGAAAGCTGTTGCAAAACTGGTG TTGTCCATGGCTATAACCTGGCTATGAGCTTGGTAAATTGATTGTGGATA TAAAATGCGGTTTGGCTATGTCCGATGACACCGACAACGCCTCTCTGAGC ATGTCTCGTCTTCCACTTCCCCTCCGAACTTGTGCAGATGAAAAATGCGA CGGGATCTCGTTGCAAATGTATGATGACAAACACAAAAAAATTACCCGCC GCAACGTAATATATTGATCAGGAGTCTGATATTGACGTGGGCTTTCCGGC TGGGGTCGAAGACAGAGATCTCATGTTGGAGCTGCAACGAGTTATTCCTG AGGAGCTGAAACACAACACACCAGACCTTGTCCTCTACGGTGCGTGCAGT GAGTGTCGGCAAACACTGGGTTGGGGTCGCAGTGAAAGGCGCGACGTCGA GATGCACCGAGTACGAATTTAGTCCTTAACATGACCTTCATTTCGTCGTT CCGACGCGACCGTACGCATATCTTGGTAGATGCTGGAGTCGACATGCACG CCGGAGACAGGCTAGGCAAGATGAACATTTCTGGTGAGTTTATATTAGAT TTACTTGTCAAGATGTGGCAATAGCAGGCTCAAAGATTATCCTCAGATCA CCATTGTTGACGTTTACATGGCAATTTGGAATTATAATATCTTTTCGACA AGCAATGGAGCCGAATGGCTGAATGATCGACACATAGTATCTGCTTGTCC TCATTCCAAAATTGCGCAGGGGTCGTAGCACGCTTGAGCTCAGCTTCTTG CTGTATCCTTGTACAATGTGCACTGTACATGGCTTCCATTCGCACAACTC TCACTAAACGTTGATGATTTTTCCTTTACCAGATCAAGGACTTCTCGACC GCGATTTTTTCGTTATTCGATCATGCCTGGATATGGGAATACCGGTGGCA TGTGTCGTCGGTGGAGGTTATGACGCTGACAGGAGAGTTCTAGCTGGCAG ACATGCTTTGGTTTTCAAGGCTGCGTTTCAGGCATGGCGAGGTCTAGGGG CAAGGCGATCTCGTTGGCGATAA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig258:20229..22801-

>mRNA_H-paniculata_contig258.7027.1 ID=mRNA_H-paniculata_contig258.7027.1|Name=mRNA_H-paniculata_contig258.7027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2016bp|location=Sequence derived from alignment at H-paniculata_contig258:20229..22801- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTACGGGCGGAGAGGTGTACGAAGAGTTTCCACCCTTGGTGTATCATGA
GCGATATAGCGCGGATCCATGGCCTGAAAAACACAGCTTCCCGATGTCCA
AATTCACGGACCTGGCACAGCTGCTGAGAGAAGAAGATGGCCCGTTGGGC
ACGCGCGGACCAATGGCAATGAAGGGAGCTTTCCGCCCGATGGACCGGCC
ACCGCACGAATGGTTCGAGGCTGTGCACGACGCAGAATACTACCGGGCAT
TTTTGGATGGGAGTCTGGACGAAAAGGCCATGCGAAGGCGAGCAGAGAAA
CACACATATTGCAAGGCACGATGGCGCCGAGAGTACGGGCGGAGAGGTGT
ACGAAGAGTTTCCACCCTTGGTGTATCATGAGCGATATAGCGCGGATCCA
TGGCCTGAAAAACACAGCTTCCCGATGTCCAAATTCACGGACCTGGCACA
GCTGCTGAGAGAAGAAGATGGCCCGTTGGGCACGCGCGGACCAATGGCAA
TGAAGGGAGCTTTCCGCCCGATGGACCGGCCACCGCACGAATGGTTCGAG
GCTGTGCACGACGCAGAATACTACCGGGCATTTTTGGATGGGAGTCTGGA
CGAAAAGGCCATGCGAAGGCGAGCAGAGAAACACACATATTGCAAGGCAC
GATGGCGCCGAGCTCTGGTTGACCGCACTCTGCTGGAAGCGTCAGGGACT
GCCCTGGCCGCGCGTCTTGCTCTTCGCTTTGGTCTGGCGTGTAATCTCGC
TGGTGGAACGCATCATGCGCACAAGGGGTTCGGCAGTGGCTCTGGTTGAC
CGCACTCTGCTGGAAGCGTCAGGGACTGCCCTGGCCGCGCGTCTTGCTCT
TCGCTTTGGTCTGGCGTGTAATCTCGCTGGTGGAACGCATCATGCGCACA
AGGGGTTCGGCAGTGGCTACACAATTCTGAACGATTTAGCGGTGGCGGCA
AAGGTCGTACAGGCCGACGGCACGGCACACAAGCTACACAATTCTGAACG
ATTTAGCGGTGGCGGCAAAGGTCGTACAGGCCGACGGCACGGCACACAAG
GTGACGGTGATAGACTGCGACGTTCACCAAGGAGATGGTACAGCTGCGAT
ATTTGCCAAGGACCCCTCCGTCCGCACGGTCTCCTTTCATTGTCAAGATA
ACTTTCCCTCCCATAAGCCGGTGACGGTGATAGACTGCGACGTTCACCAA
GGAGATGGTACAGCTGCGATATTTGCCAAGGACCCCTCCGTCCGCACGGT
CTCCTTTCATTGTCAAGATAACTTTCCCTCCCATAAGCCGGAGTCTGATA
TTGACGTGGGCTTTCCGGCTGGGGTCGAAGACAGAGATCTCATGTTGGAG
CTGCAACGAGTTATTCCTGAGGAGCTGAAACACAACACACCAGACCTTGT
CCTCTACGGAGTCTGATATTGACGTGGGCTTTCCGGCTGGGGTCGAAGAC
AGAGATCTCATGTTGGAGCTGCAACGAGTTATTCCTGAGGAGCTGAAACA
CAACACACCAGACCTTGTCCTCTACGATGCTGGAGTCGACATGCACGCCG
GAGACAGGCTAGGCAAGATGAACATTTCTGATGCTGGAGTCGACATGCAC
GCCGGAGACAGGCTAGGCAAGATGAACATTTCTGATCAAGGACTTCTCGA
CCGCGATTTTTTCGTTATTCGATCATGCCTGGATATGGGAATACCGGTGG
CATGTGTCGTCGGTGGAGGTTATGACGCTGACAGGAGAGTTCTAGCTGGC
AGACATGCTTTGGTTTTCAAGGCTGCGTTTCAGGCATGGCGAGGTCTAGG
GGCAAGGCGATCTCGTTGGCGATAAATCAAGGACTTCTCGACCGCGATTT
TTTCGTTATTCGATCATGCCTGGATATGGGAATACCGGTGGCATGTGTCG
TCGGTGGAGGTTATGACGCTGACAGGAGAGTTCTAGCTGGCAGACATGCT
TTGGTTTTCAAGGCTGCGTTTCAGGCATGGCGAGGTCTAGGGGCAAGGCG
ATCTCGTTGGCGATAA
back to top