prot_H-paniculata_contig2578.7020.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2578.7020.1
Unique Nameprot_H-paniculata_contig2578.7020.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length214
Homology
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 8.460e-62
Identity = 131/202 (64.85%), Postives = 146/202 (72.28%), Query Frame = 0
Query:    1 MGTSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGR--------GHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALYGARGSG 194
            +GTS+CN REA+AVAFAL++L+  GDVE +DVGIITPYSAQVRLLQDVVG SRRS   XXXXXXXX                                    G +R  V LPEIASVDGYQGREKEVI+LSAVRSN GGRVGFL+DWRRLNVAITRARRGVVVVGDPDTL+RD HWRAFL+WC+  GAAM E++LY A G G
Sbjct:  620 LGTSYCNVREAEAVAFALELLLREGDVEAEDVGIITPYSAQVRLLQDVVGTSRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRKRGGVGLPEIASVDGYQGREKEVIILSAVRSNRGGRVGFLADWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGAAMGEASLYVAGGGG 821          
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A6H5KWY8_9PHAE (AAA_12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWY8_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.830e-47
Identity = 78/100 (78.00%), Postives = 88/100 (88.00%), Query Frame = 0
Query:   95 GHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALYGARGSG 194
            G +R  + LPEIASVDGYQGREKEVI+LSAVRSN GGRVGFL+DWRRLNVAITRARRGVVVVGDPDTL+RD HWRAFL+WC+  GAAM E++LY + G G
Sbjct:   32 GRKRGGIGLPEIASVDGYQGREKEVIILSAVRSNRGGRVGFLADWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGAAMGEASLYVSGGGG 131          
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A835Z7U9_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U9_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.210e-35
Identity = 81/162 (50.00%), Postives = 94/162 (58.02%), Query Frame = 0
Query:   26 DVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESAL 187
            DV  +DVG+ITPY+AQVR      G  R+ +AA                              + W          +L E+ SVDGYQGREKEVI+LSAVRSN  G VGFLSDWRRLNVAITRARRGVV+VGDP TL  D HWRA++ WC  +GA M E  L
Sbjct:  209 DVAPQDVGVITPYAAQVRR-----GGGRKRTAAPPRAP-------------------------QPW----------ELIEVRSVDGYQGREKEVIVLSAVRSNRCGAVGFLSDWRRLNVAITRARRGVVIVGDPATLSHDAHWRAYIAWCAENGALMTERDL 330          
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A0G4FCG3_VITBC (SAP domain-containing protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FCG3_VITBC)

HSP 1 Score: 141 bits (356), Expect = 3.840e-35
Identity = 84/181 (46.41%), Postives = 100/181 (55.25%), Query Frame = 0
Query:    3 TSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMD 183
            TS  NR EA  +   L  LV+ GDV   D+G++TPY+AQVR LQD +                              R E G             R T  L E+ SVDGYQGREKEVIL SAVRSN  G VGFL DWRRLNVA+TRARRG+VV GDP TL  DPH+ ++++WC   G  +D
Sbjct: 1014 TSKYNREEALCLVKVLKELVSHGDVSYTDIGVVTPYAAQVRFLQDTL------------------------------RTELG-------------RDTAALIEVKSVDGYQGREKEVILFSAVRSNPTGSVGFLRDWRRLNVAVTRARRGLVVFGDPRTLTADPHYDSYIQWCKHEGLVVD 1151          
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: W7TMD0_9STRA (Regulator of nonsense n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMD0_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.700e-33
Identity = 79/185 (42.70%), Postives = 102/185 (55.14%), Query Frame = 0
Query:    3 TSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESAL 187
            TS+ NR+EAD +   L  ++   +++  DVGI+TPYSAQV+ + ++  A  R                                            +  DL EI SVD YQGREKE+I++SAVRSN  G+VGFL DWRRLNVAITRA+RG+VV+GDP TL  DPHW A+L+W   HG  M    L
Sbjct:  850 TSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHF------------------------------------------NPGDL-EIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMTVGEL 991          
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A8J4D8K7_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D8K7_9CHLO)

HSP 1 Score: 132 bits (333), Expect = 4.470e-32
Identity = 92/217 (42.40%), Postives = 122/217 (56.22%), Query Frame = 0
Query:    2 GTSFCNRREADAVAFALDMLVAAGDVE----VKDVGIITPYSAQVRLLQDVVGASRRSS-----AAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALYGARGSGIGGGRGGDGDNEEGS 209
            G S+ N  EA+ VA  +  L+  G V       D+G++TPY+ QVR LQ ++    R S      A         T ++ +AS DE      +G  RE A          + EI SVDG+QGREKEVI+ S VRSN  GR+GF++D RRLNVAITRARRG+VV+G+PDTL +D  W  +L+W  S G  ++     G    G+GGG   DGD  +GS
Sbjct:  979 GYSYQNNDEAETVAAVVAALLTPGSVAGLDGPGDIGVVTPYNGQVRCLQQLLTNGSRLSRGLGQGARPGSFLRATTAATAAASSDE------EGLSREGA----------VLEIKSVDGFQGREKEVIVFSTVRSNPAGRLGFVADGRRLNVAITRARRGLVVLGNPDTLAKDRLWARWLQWVASRGCVLEGWGPNGTAAVGVGGGN--DGDRGDGS 1177          
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A812XS06_SYMPI (UPF1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XS06_SYMPI)

HSP 1 Score: 123 bits (309), Expect = 1.150e-31
Identity = 74/182 (40.66%), Postives = 101/182 (55.49%), Query Frame = 0
Query:    7 NRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALY 188
            N  EA+ V   ++ ++ AG    +D+GI+TPY AQVRLL+     S R+                                 +E   + +        EIASVD +QGREKE+I+ SAVR+N  GRVGFL+DWRRLNV +TRARRG+VVVG   TL++DP+W  +LRWC  H   +D+ A +
Sbjct:   16 NAAEAEKVVHIVESVLDAG-CTAEDLGIVTPYMAQVRLLR----TSWRNRC-------------------------------KERGAKWNASRISRALEIASVDNFQGREKELIVFSAVRNNSAGRVGFLADWRRLNVMLTRARRGLVVVGHGQTLQKDPYWSKWLRWCADHRVIVDKQAWH 161          
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A2D7JSD9_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2D7JSD9_9EURY)

HSP 1 Score: 131 bits (329), Expect = 1.180e-31
Identity = 79/178 (44.38%), Postives = 101/178 (56.74%), Query Frame = 0
Query:    2 GTSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHG 179
            G S  N+ EA  V   +D L+A GD++  D+GI+TPY+ QVRLL D+                       +SA G E                G R   +   EI SVDGYQGREK+VI+ S VR+N  G VGFLSD+RRLNVAITRA+RG++++G P TL  DP+WRA+L W D  G
Sbjct:  549 GKSRSNQDEAAKVIGIVDELLAMGDLQASDIGIVTPYNGQVRLLSDLF----------------------ESAGGRES---------------GQRYSGL---EIKSVDGYQGREKDVIVFSTVRANDAGEVGFLSDYRRLNVAITRAKRGLIILGHPTTLRHDPNWRAYLDWADESG 686          
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A2K3DEK9_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DEK9_CHLRE)

HSP 1 Score: 129 bits (325), Expect = 5.230e-31
Identity = 90/194 (46.39%), Postives = 113/194 (58.25%), Query Frame = 0
Query:    2 GTSFCNRREADAVAFALDMLV---AAGDVE--VKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXA-TDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALYG 189
            G S+ N  EA  VA A+  L+   AA  +E  V D+G+ITPY+ QVR LQ ++    R S          A   ++ S  GD+      DG      GR        + EI SVDG+QGREKEVI+ SAVRSN  GR+GF+SD RRLNVAITRA+RG+VVVG+PDTL  D  W  +LRW ++ G  M E  L G
Sbjct:  950 GFSYQNDDEAGVVAAAVAALLTPGAAAGLENGVGDIGVITPYNGQVRCLQQLLTRGSRLSRGLGVGSRPGAFRRAAPSMEGDD------DGAGGSGGGRAE-----PVLEIKSVDGFQGREKEVIVFSAVRSNPEGRLGFVSDPRRLNVAITRAKRGLVVVGNPDTLMVDRLWARWLRWAEAQGCVMQEGGLAG 1132          
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A7S4R027_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4R027_9DINO)

HSP 1 Score: 128 bits (322), Expect = 1.230e-30
Identity = 86/189 (45.50%), Postives = 113/189 (59.79%), Query Frame = 0
Query:    2 GTSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGD--GQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALY 188
            G S  N +EAD +   L+ ++ AG  +V D G++TPY AQVRLL+        + A  XXXXXXX         GD       +  G  + W      R   DL EIASVD +QGREKE+I+ S+VR+N GG+VGFLSDWRRLNV +TRARRG++V+G+  TL  DP W+ +L WC  H   +D   L+
Sbjct:  456 GESRLNEQEADRLLDVLEGVLDAGGCDVSDAGVVTPYMAQVRLLRQKWRERCAARAKAXXXXXXXXXXXXXXQQGDAPAPSASEVNGAPQWW------RTPRDL-EIASVDHFQGREKELIVFSSVRNNGGGKVGFLSDWRRLNVMLTRARRGLIVIGNAWTLRHDPMWKKWLAWCGRHQVVVDRQELH 637          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK70_ECTSI8.460e-6264.85tRNA-splicing endonuclease positive effector n=1 T... [more]
A0A6H5KWY8_9PHAE1.830e-4778.00AAA_12 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7U9_9STRA2.210e-3550.00AAA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A0G4FCG3_VITBC3.840e-3546.41SAP domain-containing protein n=4 Tax=Vitrella bra... [more]
W7TMD0_9STRA2.700e-3342.70Regulator of nonsense n=2 Tax=Monodopsidaceae TaxI... [more]
A0A8J4D8K7_9CHLO4.470e-3242.40Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
A0A812XS06_SYMPI1.150e-3140.66UPF1 protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
A0A2D7JSD9_9EURY1.180e-3144.38Uncharacterized protein n=1 Tax=Euryarchaeota arch... [more]
A0A2K3DEK9_CHLRE5.230e-3146.39Uncharacterized protein n=2 Tax=Chlamydomonas rein... [more]
A0A7S4R027_9DINO1.230e-3045.50Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 3..159
e-value: 2.1E-36
score: 125.4
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 2..204
NoneNo IPR availablePANTHERPTHR10887:SF463coord: 2..204
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2578contigH-paniculata_contig2578:11343..15322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2578.7020.1mRNA_H-paniculata_contig2578.7020.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2578 11304..18090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2578.7020.1 ID=prot_H-paniculata_contig2578.7020.1|Name=mRNA_H-paniculata_contig2578.7020.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=214bp
MGTSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVG
ASRRSSAAAAAAAVAKATDSSDSASGDEGRDERGDGQEREWAGRGHRRHT
VDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRAR
RGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALYGARGSGIGGGRG
GDGDNEEGSRDVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041679DNA2/NAM7-like_AAA
IPR027417P-loop_NTPase