mRNA_H-paniculata_contig2578.7020.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2578.7020.1
Unique NamemRNA_H-paniculata_contig2578.7020.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 5.070e-55
Identity = 137/215 (63.72%), Postives = 153/215 (71.16%), Query Frame = 1 
Query:    1 VQGGDGRGAATAEMGTSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGR--------GHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALYGARGSG 621
            VQGG     A+A +GTS+CN REA+AVAFAL++L+  GDVE +DVGIITPYSAQVRLLQDVVG SRRS   XXXXXXXX                                    G +R  V LPEIASVDGYQGREKEVI+LSAVRSN GGRVGFL+DWRRLNVAITRARRGVVVVGDPDTL+RD HWRAFL+WC+  GAAM E++LY A G G
Sbjct:  610 VQGGS---FASAALGTSYCNVREAEAVAFALELLLREGDVEAEDVGIITPYSAQVRLLQDVVGTSRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRKRGGVGLPEIASVDGYQGREKEVIILSAVRSNRGGRVGFLADWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGAAMGEASLYVAGGGG 821
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BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A6H5KWY8_9PHAE (AAA_12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWY8_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.790e-42
Identity = 78/100 (78.00%), Postives = 88/100 (88.00%), Query Frame = 1 
Query:  322 GHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALYGARGSG 621
            G +R  + LPEIASVDGYQGREKEVI+LSAVRSN GGRVGFL+DWRRLNVAITRARRGVVVVGDPDTL+RD HWRAFL+WC+  GAAM E++LY + G G
Sbjct:   32 GRKRGGIGLPEIASVDGYQGREKEVIILSAVRSNRGGRVGFLADWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGAAMGEASLYVSGGGG 131
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BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A835Z7U9_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U9_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.340e-31
Identity = 81/162 (50.00%), Postives = 94/162 (58.02%), Query Frame = 1 
Query:  115 DVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESAL 600
            DV  +DVG+ITPY+AQVR      G  R+ +AA                              + W          +L E+ SVDGYQGREKEVI+LSAVRSN  G VGFLSDWRRLNVAITRARRGVV+VGDP TL  D HWRA++ WC  +GA M E  L
Sbjct:  209 DVAPQDVGVITPYAAQVRR-----GGGRKRTAAPPRAP-------------------------QPW----------ELIEVRSVDGYQGREKEVIVLSAVRSNRCGAVGFLSDWRRLNVAITRARRGVVIVGDPATLSHDAHWRAYIAWCAENGALMTERDL 330
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BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A0G4FCG3_VITBC (SAP domain-containing protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FCG3_VITBC)

HSP 1 Score: 140 bits (353), Expect = 7.710e-30
Identity = 84/181 (46.41%), Postives = 100/181 (55.25%), Query Frame = 1 
Query:   46 TSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMD 588
            TS  NR EA  +   L  LV+ GDV   D+G++TPY+AQVR LQD +                              R E G             R T  L E+ SVDGYQGREKEVIL SAVRSN  G VGFL DWRRLNVA+TRARRG+VV GDP TL  DPH+ ++++WC   G  +D
Sbjct: 1014 TSKYNREEALCLVKVLKELVSHGDVSYTDIGVVTPYAAQVRFLQDTL------------------------------RTELG-------------RDTAALIEVKSVDGYQGREKEVILFSAVRSNPTGSVGFLRDWRRLNVAVTRARRGLVVFGDPRTLTADPHYDSYIQWCKHEGLVVD 1151
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BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: W7TMD0_9STRA (Regulator of nonsense n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMD0_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.230e-28
Identity = 79/185 (42.70%), Postives = 102/185 (55.14%), Query Frame = 1 
Query:   46 TSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESAL 600
            TS+ NR+EAD +   L  ++   +++  DVGI+TPYSAQV+ + ++  A  R                                            +  DL EI SVD YQGREKE+I++SAVRSN  G+VGFL DWRRLNVAITRA+RG+VV+GDP TL  DPHW A+L+W   HG  M    L
Sbjct:  850 TSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHF------------------------------------------NPGDL-EIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMTVGEL 991
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BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A812XS06_SYMPI (UPF1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XS06_SYMPI)

HSP 1 Score: 122 bits (306), Expect = 7.410e-28
Identity = 75/185 (40.54%), Postives = 102/185 (55.14%), Query Frame = 1 
Query:   49 SFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALY 603
            S  N  EA+ V   ++ ++ AG    +D+GI+TPY AQVRLL+     S R+                                 +E   + +        EIASVD +QGREKE+I+ SAVR+N  GRVGFL+DWRRLNV +TRARRG+VVVG   TL++DP+W  +LRWC  H   +D+ A +
Sbjct:   13 SKMNAAEAEKVVHIVESVLDAG-CTAEDLGIVTPYMAQVRLLR----TSWRNRC-------------------------------KERGAKWNASRISRALEIASVDNFQGREKELIVFSAVRNNSAGRVGFLADWRRLNVMLTRARRGLVVVGHGQTLQKDPYWSKWLRWCADHRVIVDKQAWH 161
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BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A8J4D8K7_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D8K7_9CHLO)

HSP 1 Score: 132 bits (333), Expect = 1.480e-27
Identity = 95/231 (41.13%), Postives = 129/231 (55.84%), Query Frame = 1 
Query:   43 GTSFCNRREADAVAFALDMLVAAGDVE----VKDVGIITPYSAQVRLLQDVVGASRRSS-----AAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALYGARGSGIGGGRGGDGDNEEGS---RDVV*ERLCRA 699
            G S+ N  EA+ VA  +  L+  G V       D+G++TPY+ QVR LQ ++    R S      A         T ++ +AS DE      +G  RE A          + EI SVDG+QGREKEVI+ S VRSN  GR+GF++D RRLNVAITRARRG+VV+G+PDTL +D  W  +L+W  S G  ++     G    G+GGG   DGD  +GS   R ++ + + RA
Sbjct:  979 GYSYQNNDEAETVAAVVAALLTPGSVAGLDGPGDIGVVTPYNGQVRCLQQLLTNGSRLSRGLGQGARPGSFLRATTAATAAASSDE------EGLSREGA----------VLEIKSVDGFQGREKEVIVFSTVRSNPAGRLGFVADGRRLNVAITRARRGLVVLGNPDTLAKDRLWARWLQWVASRGCVLEGWGPNGTAAVGVGGGN--DGDRGDGSGVVRSLLQQGVLRA 1191
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BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A2D7JSD9_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2D7JSD9_9EURY)

HSP 1 Score: 130 bits (328), Expect = 2.020e-27
Identity = 80/180 (44.44%), Postives = 102/180 (56.67%), Query Frame = 1 
Query:   37 EMGTSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCDSHG 576
            E G S  N+ EA  V   +D L+A GD++  D+GI+TPY+ QVRLL D+                       +SA G E                G R   +   EI SVDGYQGREK+VI+ S VR+N  G VGFLSD+RRLNVAITRA+RG++++G P TL  DP+WRA+L W D  G
Sbjct:  547 EEGKSRSNQDEAAKVIGIVDELLAMGDLQASDIGIVTPYNGQVRLLSDLF----------------------ESAGGRES---------------GQRYSGL---EIKSVDGYQGREKDVIVFSTVRANDAGEVGFLSDYRRLNVAITRAKRGLIILGHPTTLRHDPNWRAYLDWADESG 686
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BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A7S3S4K7_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S4K7_EMIHU)

HSP 1 Score: 126 bits (317), Expect = 6.250e-27
Identity = 86/191 (45.03%), Postives = 102/191 (53.40%), Query Frame = 1 
Query:    7 GGDGRGAATAEMGTSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDV----VGASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLERDPHWRAFLRWCD 567
            GG   GAA    G S  NR EA  +   L+ L+A GDV+   VG++TPY  QVRLL+ +     G  R+  AA        A                        AGR          EIASVD +QGREKEV+L SAVR+N  G VGFLSDWRRLNV +TRARRG+VVVG  +TL  DP+WR   RW D
Sbjct:  272 GGPKGGAAEHAEGESRLNRAEATRLMGVLEGLLAGGDVDCSQVGVVTPYKGQVRLLRQLWRERCGRPRQGGAARKAPLVPAAE-----------------------AGR---------LEIASVDNFQGREKEVVLFSAVRANSHGAVGFLSDWRRLNVLLTRARRGLVVVGHQETLRHDPYWR---RWLD 427
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BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Match: A0A7R9WGL2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGL2_9STRA)

HSP 1 Score: 117 bits (294), Expect = 7.190e-27
Identity = 72/162 (44.44%), Postives = 95/162 (58.64%), Query Frame = 1 
Query:  109 AGDVEVKDVGIITPYSAQVRLLQDVVG--ASRRSSAAXXXXXXXXATDSSDSASGDEGRDERGDGQEREWAGRGHRRHTVDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTL-ERDPHWRAFLRWCDSHGAAM 585
            AG    K +G++TPY++QV L++ ++   A+ RS             DS  S+S D G                     V L E+ SVDGYQGRE++V++ SAVRSN  G VGFLSDWRR+NVA+TRAR G+VVVGD +TL + D HW AF+ WCD  G  +
Sbjct:   22 AGTAAPKSIGVVTPYASQVSLIKSLLSSDATLRS---------HLKADSPSSSSSDGG--------------------GVTL-EVKSVDGYQGRERDVVVFSAVRSNRRGDVGFLSDWRRMNVALTRARNGLVVVGDAETLRDGDKHWNAFVNWCDGVGCMI 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2578.7020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK70_ECTSI5.070e-5563.72tRNA-splicing endonuclease positive effector n=1 T... [more]
A0A6H5KWY8_9PHAE1.790e-4278.00AAA_12 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7U9_9STRA2.340e-3150.00AAA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A0G4FCG3_VITBC7.710e-3046.41SAP domain-containing protein n=4 Tax=Vitrella bra... [more]
W7TMD0_9STRA2.230e-2842.70Regulator of nonsense n=2 Tax=Monodopsidaceae TaxI... [more]
A0A812XS06_SYMPI7.410e-2840.54UPF1 protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
A0A8J4D8K7_9CHLO1.480e-2741.13Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
A0A2D7JSD9_9EURY2.020e-2744.44Uncharacterized protein n=1 Tax=Euryarchaeota arch... [more]
A0A7S3S4K7_EMIHU6.250e-2745.03Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7R9WGL2_9STRA7.190e-2744.44Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2578contigH-paniculata_contig2578:11304..18090 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score218.8
Seed ortholog evalue2.5e-54
Seed eggNOG ortholog2880.D7FK70
KEGG koko:K14326
KEGG Pathwayko03013,ko03015,map03013,map03015
KEGG ModuleM00430
Hectar predicted targeting categoryother localisation
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
EggNOG OGsCOG1112@1,KOG1802@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-17_002950.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Exons3
Model size3449
Cds size642
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2578.7020.1prot_H-paniculata_contig2578.7020.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2578 11343..15322 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929764.78607-UTR-H-paniculata_contig2578:11303..113421622929764.78607-UTR-H-paniculata_contig2578:11303..11342Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2578 11304..11342 +
1691481001.0261266-UTR-H-paniculata_contig2578:11303..113421691481001.0261266-UTR-H-paniculata_contig2578:11303..11342Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2578 11304..11342 +
1622929764.8848026-UTR-H-paniculata_contig2578:15322..180901622929764.8848026-UTR-H-paniculata_contig2578:15322..18090Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2578 15323..18090 +
1691481001.0739017-UTR-H-paniculata_contig2578:15322..180901691481001.0739017-UTR-H-paniculata_contig2578:15322..18090Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2578 15323..18090 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929764.8245804-CDS-H-paniculata_contig2578:11342..114261622929764.8245804-CDS-H-paniculata_contig2578:11342..11426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2578 11343..11426 +
1691481001.0379968-CDS-H-paniculata_contig2578:11342..114261691481001.0379968-CDS-H-paniculata_contig2578:11342..11426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2578 11343..11426 +
1622929764.8450162-CDS-H-paniculata_contig2578:12493..127631622929764.8450162-CDS-H-paniculata_contig2578:12493..12763Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2578 12494..12763 +
1691481001.0481098-CDS-H-paniculata_contig2578:12493..127631691481001.0481098-CDS-H-paniculata_contig2578:12493..12763Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2578 12494..12763 +
1622929764.867064-CDS-H-paniculata_contig2578:15034..153221622929764.867064-CDS-H-paniculata_contig2578:15034..15322Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2578 15035..15322 +
1691481001.0655203-CDS-H-paniculata_contig2578:15034..153221691481001.0655203-CDS-H-paniculata_contig2578:15034..15322Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2578 15035..15322 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2578.7020.1

>prot_H-paniculata_contig2578.7020.1 ID=prot_H-paniculata_contig2578.7020.1|Name=mRNA_H-paniculata_contig2578.7020.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=214bp
MGTSFCNRREADAVAFALDMLVAAGDVEVKDVGIITPYSAQVRLLQDVVG
ASRRSSAAAAAAAVAKATDSSDSASGDEGRDERGDGQEREWAGRGHRRHT
VDLPEIASVDGYQGREKEVILLSAVRSNYGGRVGFLSDWRRLNVAITRAR
RGVVVVGDPDTLERDPHWRAFLRWCDSHGAAMDESALYGARGSGIGGGRG
GDGDNEEGSRDVV*
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mRNA from alignment at H-paniculata_contig2578:11304..18090+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2578.7020.1 ID=mRNA_H-paniculata_contig2578.7020.1|Name=mRNA_H-paniculata_contig2578.7020.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6787bp|location=Sequence derived from alignment at H-paniculata_contig2578:11304..18090+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCCAGGGTGGGGATGGGCGTGGGGCGGCGACTGCGGAAATGGGCACATC
GTTCTGTAACCGAAGAGAGGCTGATGCTGTGGCATTTGCTCTGGACATGC
TCGTCGCTGCGGGGGACGTGGAGGTAGGGATGGGCGTGGAGGGAGGGGTG
TATTCATACATTGCATTCCGTAGTTGGTAGACGATGGACCAGGTTTCCTC
GGGAGGACGGCGTTTGGTTCATATCAGAGCGTTTTCCAATGGCCAATCGC
TTTTCCGGCGTCGCCAAATATGACTCATCAATGTTTCACCTAACTTACAA
CCTCAACCCTCGGCTTGTTCGGCCAATTGTTATGGCGCGCGCGCGCCCGG
GGGGGGGAGGGGGGTCAAGTTGATCCCAATCTCTTATAGTGAGGGGTTAG
CACACGGTGTACCAGCACACAGTAGCGTCGAGAGTAAAAGTTCGTGGGTG
CAATAATACGTCCTAGATATATATTTTTAGAGCTTTTTCCCTCCATAATG
GTTCGGCTCATCTCCCCTCGCCCCTCTTTTTAGAACACCCCACCACCCTG
ACTTTTTTCACCGCTACACATTATTATTTTCCTGCGTTGGTCCGCACGCT
CAAATCCTGCACGTAGGCTTAAGATATCCTCCCAATTAAACTGTGTGCGT
TTCCAGCGAAGGTAATGATTATTGGTATAACCCCCAGCGCACCACTTGGT
CATCATCCAATTTGCGGTTCTTTTGCCCATAGTTGAAAGCTTTATATGCT
TGATTGTAGGTACAGTATGTATTTTGCGGTAATTTTGCCAAATGAGTGGC
GCACTATAACACGGGCTAATAAACAGGTTTTGGCGAAATGGCACCTTTTG
GGTTCTCCAATGTGGTAGTTTTGTGTGGAATTTTGGGCCGGTAACTGCTT
CTTTTCGCCATCCGCGACTCCACAAAATACGAGTGTAGAACTGATCGATA
CGACGCATTTAATTCACACACCCGAAGGATTAATTGGCATTGACAGTCTA
ATCACAATTCGCTTATTTTCAGAGTCTTCAGTTGGAGTATAGAGTTGATT
TTCAAACTAACTAGTTGCGATTTTCTCACAGCAGGTGTTGGGACAAAAGA
AAGGCTCCTTAGTTAGTATGTGAAGTATTTAGTTGCCTTCTAATACGCCC
ATGCTTTGGATACCGTACCATCCTTCGTGCACTCAACAAGGTGAAGGACG
TCGGTATCATCACGCCGTACTCGGCCCAAGTCAGGCTCCTGCAAGACGTC
GTCGGCGCTTCAAGGCGCTCTTCGGCAGCTGCGGCGGCAGCAGCTGTTGC
AAAGGCAACGGATTCCAGCGATTCTGCGTCGGGTGACGAAGGCAGAGATG
AGAGGGGGGACGGCCAGGAGAGGGAGTGGGCGGGGCGGGGGCACCGGAGG
CACACGGTGGACCTGCCCGAGATTGCTTCTGTCGACGGGTACCAAGGACG
AGAAAAAGAGGTGTGGGGGGATAGGCAACAGATAAAATGGTCCTGATATG
AACAATGGACACCATAAAAATGAAGAGCGATCCTTTAATGTATTACCTGA
AATTCTCATTCATAAATTAAGCTTTGCCATAGTCAGTTGAACTGTAGCTC
TAAAGTTATAATTATGGCTTCGTCGTATCCATGTTGAGGTTATGCAACTG
GCTTAAATTTGCGGGTGTATACACTTATCAGCTAAATTAAATCAATGGGG
GGGGGAGGTAAGGGATGCCTTATTGGTTAGACCGTCAAATCAAGCGACCT
CGAGAGGACAGGGTTTTGGGGGGGGAGGGGAGAATTTTCGAGTTTTTGGC
TTTTATGCAATGCATGCATGGGGCACCCAGGAAGTTCTGGGTGTTTGGGT
TTGTCGGTTCTCAGTGGCTGCTTGATTCTTCTGTTCATTAGACGGGGCAG
GGGGTAAATAGATGATGGAGGCGGGGGGGGGACGGAGCTGCTCGCGGTTG
TCGTGGCCACTTAGTTCTCTATTTCAACACGCGTTAGATGTAAGGCCTCT
GTTGAACATGACACATGTGGTGTTTCTGCTCAACACTATTTGATTTGCTG
AGTTGTGGTGCTGCAATTCTTCCGCCAATTGAGAATGTTGAGGTCAGCGA
ATGTGAGCGAAAACATCATCAGTATTTCGTGGCAGTACCCTCCGGACAAG
ACCGTTAATTCCGTTAACGACACGCCTTGGACCTCTTCAACACGGTTACG
TTGATTGGTATTCCGAGCACTTTTCACAGCGTCATAAATCCCCCCCCCTT
TTTTTTGGTAAAATTGTACCCGATAGTAGCCGACCCGAATCTGGACACAT
GTATCAAAACAACACTTTTGATTGGTGTTACTATTCTGCAGTTAGAATAC
GCAAAAGGGCTATAGGAAGGAAACCAGAAGGCAATCAAGGAGTTGGAAGT
AGTTCAGATGAAAACAGAGTAGTTGATACTAGGATGTTCGCAGCGCACCA
GTAACGCAGCAGTAAGGGCCGAGATTGGACATACACTTCTTGAAAGCGGG
AAGAGACGTAAGGAAGCTGAAGTGGTAGCACAGGCTACATAGAATGGGAG
AAAAGAGACTGCCACAAACCACAAGATAAGCAGAGTGAAAATCACTTAAA
AAGGGTAGAAGACCGTCCGAGTGGGACACCGTTGTAGGGAAAGTGTGGAA
GTAACTGGAAATTTCTCAGGAGGAGACGATGAAGAGTAAGGACACGGGCG
GATTTAAGGACGAAATAGCGGGTGCCATTGCAGTTAGGGAAGAACAAGGG
CTAAGGAGAGAAGCTGCAAGTAAGGATTGTCCAGAGTATATCTAACGCTG
GATGAAAGAATCGGGTTCAAGGGGTACCTACATGGACCATGAGACGCAGG
CATACGGTTGAAAGTCAAATTTAGGACGGGGAGATCTTGACCTCAAGGAA
AATGAGAAACAACCCAGAAAAGTAGACGAGGCGACGACGGTATGTTCAAG
TATGACAGCGGTAGTGTGTGTGAGGACTGATTCCATATCGTGAGGCTTTT
GAGAGCTGGGATTGCGAAAAGGAGGTGATAGTGGTTCTAGTAGATCGAAG
TTTACCTGAACACGCGCGAGTTGAGGCATCTAAGGTAAGAACGTTTGACC
ATTGGAAATTGCCGTGACAGGAATAAAGCTCTCTCCTCCCGAGGACGCGT
TGTCAATGGTCCAACAACTACGACATGCAGAATTTGATTACCCCCCCCCC
CCCCTTCTCCCATACGTGGTGTTTGAAATGTGATGCTGATACATCTGTGT
CCATGATGACAGGCTGAATAAATAACCTCAACAGGTGTATGTAGGTGTGT
TATCAAAGACTGCTCCCAACCCTCCTTAACTGGACTTGTTTCTTTTCTTG
TGCCGATGAGTATATCTAGCCATGATCGTACCGTGAATGAACTCAGAGAA
TGTACGCACGTTTGCTGAGATTATTAGTAGATCGAGGCAGTCGAGACAAA
AAACGGGTGGACTGGTCAGTGGTGGTCGACACATGAGATGTCTCGTATCT
GTATCAGGTGATCCCCCCCTTTTGGGTTAAAAAAAATGCTGATGACTATT
GCATGATACAGTAGACACTGCCTCATGAATAATGACTAAAATGCACTTAG
CATTACACGCATTTTTGTTGCAAACTATTACATACCAGTATGAAGGTGTT
GGATACTCATCAGGCGAATCAATACCCCCCCCCCCCCCCCCCCACCTCTC
CAAACACACTCCAATCATGTCCCCAAACCAGGTCATTCTACTTTCAGCCG
TGCGTTCCAACTACGGCGGCCGGGTCGGTTTTCTCAGCGATTGGCGACGC
CTTAACGTCGCCATTACTCGGGCACGCCGCGGCGTGGTCGTAGTCGGAGA
CCCAGACACGCTAGAAAGGGACCCTCACTGGAGGGCTTTCTTGCGATGGT
GCGACAGCCATGGTGCTGCCATGGATGAATCTGCGCTTTACGGGGCTCGA
GGGAGTGGAATCGGAGGGGGCAGAGGTGGTGACGGAGACAACGAGGAGGG
TTCTCGTGATGTGGTATAGGAGCGATTGTGCAGGGCGTATGCTGAAGGCT
AGGGCGACTGGTATAATAATAATATCACCCCCCAGTTTAGGCCTTCATTT
TCAGTCAGAGAGTGGAGCACTTGGTTGAATGTGAGAGTTGTGCCGTGGGC
CATATCTCGTAGATATGCATTGGTAGACAGATATGCTCTTTTTGAGACGA
TGCAGGGGCTGCTGCATATGCTCCTCGAGAGAGCCGGTCTTGATGAAAGT
CGTTGCCCGCATTGACATACTCTGGATACCTGCCCTACGCGCGCGGGGGG
GGGAGGGCGAACAACATGTTGAGGTTTTGATGCCTTGCTGAAAGGTAAAC
TACGTATACTTATCAGCAGAATTAGACCAAACATGGGCAATATGGGCAAC
TGAGAAGATGGTGGTACAACCACAGTCGAAATGATAATGTTCCTGCCAAC
GTATGCAAGACGTTTGGCCAGGGCAAGGTAGGTATGTCTCTGTTAATGGT
GTGAGAATCAGCCAATCGCATGTGTGCGTCAGGTTGAACACGATTTGATG
TAACATAGCTCAAGTATGCTGTCCACTATATTGGCTACAACTGTTGCAGC
GTGTGCTGGCTCTATCCGCTCGCGCTACACTGGCAGTGTTTTCGCACCCC
GTCCCTGAAGTCAGGGCTTTTGTTTTGAAGCCATCTTGTACAATTGGGCG
TAATGTTTTAAGGGCCTGAAGGGGGTCCGACCCGTTTTAGATTACGCCTT
CACCCCGTTGTGTTATAGGTCATTTTCCGCTTTGGAAGTCAAACGTTTCC
GGTAATGAGTCAACTGTACATGGGGGGCGGGGTCTGGGGAGGAAAGGGGC
GATTTTGGAGGTCTGCGTTAACTGCCTTGTAGCGACGAAAAACTGCTGCT
GATTTGGGCAGCGAGCTGCTCTTTGCCGTGGCATTGTCTGAGACACTGGT
TGTCGACAAGGTATATTGTGGTATAAAGAGGAGAAGAAAATGTGCTGGCT
GTTCTCTGATTGGTCGCTTTTTTTTTCAGGTTATATGATATGGCGAAAAC
TTGGGGCATTGCTTCTGTCTCTTTCTGTCTCTCTCTATATGTAAAGACGT
GGTTTGAAAATTGGAGGATACATGAAATAATTTCGCCGGCGCAAAGTGTT
GTTTCTCATGAGTATTTGCTGGTTTGTTGGCCGGGTTGGCTGTCTTCGTG
TTGTTGTGACCGTTTTTGAGGTGTGCGCTGTTTGCCCCCCCTCAAAGATC
CCTAAAGTATCGCTTACACGATGTTGTGTGTTTGTGTTTTTGTTTGTAAC
ATTCCCCGAAAACAAAATGGGAAAAGGGAGGAGGAAATGTATCATAGTAA
TAGTATCTAACCTGTTCGCGTTGTACATACTAGCGAAAAGAAAAGGGCGA
ATTAAATACCAGCCAAAATATGGCAGAAAAAATAGCGAGAGAAATTGGAC
AGATTTACCATGCACAAGAAGTAAGAAAAATCCCCCCCCCCGCACATGGG
ACGCCGTTTTTGCACAGTTCAGATTTTCGCACATGGAAAAACGACTCGAT
TTTCTTCCGTGACAGCTCAAAAATTGTTGCGAATTTCGGCTAAAAATAGG
CAAAATTAGGACTAGAGTCGCCTATCAGTTGGCTTTCCAGGTAAATCTCA
AACGGTCCTCTTGAGGCCGCTTGTGAGCGCATACGTTGACTGATTCTCGT
AGCTTGGAGCGCATGGGAGACGGCCGTGGATCCTGCGCCGGTTTTTTCAG
TGCCCTAGTATATGGCACCTGGCTCTGAGGGGAGGGGCGGTACCTTGGAG
AGTTGCTTGTGGTCGTCTATTTTTGCTGGCTGGGCAGGGAGATCACAGGA
AACAAGAGGGAAACACTAACGTTTTTTTTAGAGGTGTGGGATGGGGGAAA
TTGGTGGAGAAATTGGGGCTCCCAATCGCTGAATAAAGGCATGAGGGAAA
TTGTCAAGAAGGTAGGAGTTGGAACAAAAATGGAAAACTTGTTTCGTCCT
CTTCCACTGTTGTTGCGAGAGTCAGCTCCCTCTGCTCTAGGTTTTCCAAA
GCTATGGGTGGCTTTTGTTTTGTGGTGATATTGTGAAACCGCAGGGTGGG
ATTGGAGGAAGAATGGGAGAATGCGCAGCTGAACCTTCCCGTTAATAACG
CGGACCACTTCTGTACATATACGTACACGACGAGGTACATTTTCACCGAA
ATGTTTTTATCAGCGCAATTGATGAAGGCTTTGTGTGCAAAAATGCAGGC
GGCGTTTTTTTCGTGTGTTCGTTTTACACCTCATCATACGTATTTGCACG
GCGCGTTCTTTCACACGATACTCAACATTGGTGTGTCGCTACACAGCCGA
CGTCTTACAGAGGGGGGCGTAGCGCGAGGGTTGTTGCTCTTCAAATCTAG
GCTCGAAGTCCCAATTGGTCGTTGCTGGTATTTCGGCGTCTTGAATATTT
GTTGTATCTTTCTTCCCATTTTCCTGTAATATTAATAACAGCATTTCCAG
TTCAGCGGAATTATGCAGAAGAAAACTTTTTTTTTTTTTTTTTTCATTTT
TTAGGCTAGACACTGGCTCCGGAGGGATTCCGGATGGGTTGACTGTATAG
TATACAACGTTTCGATATATCTCTCCAGGATGATTTTTCTTCGGGTGTGT
AACGCCGCGTTTTTATCCGGTGTTCAGGCGGCCATGGTGCACGACCGTGA
ATTTGGAGGGTCTTCAATTTTGATTCTATGGGTGTCATAGTAGGATGAAA
TAAACTGATAACACCCAGATAGCACCCAAGTCTACGG
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Coding sequence (CDS) from alignment at H-paniculata_contig2578:11304..18090+

>mRNA_H-paniculata_contig2578.7020.1 ID=mRNA_H-paniculata_contig2578.7020.1|Name=mRNA_H-paniculata_contig2578.7020.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at H-paniculata_contig2578:11304..18090+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCACATCGTTCTGTAACCGAAGAGAGGCTGATGCTGTGGCATTTGC
TCTGGACATGCTCGTCGCTGCGGGGGACGTGGAGATGGGCACATCGTTCT
GTAACCGAAGAGAGGCTGATGCTGTGGCATTTGCTCTGGACATGCTCGTC
GCTGCGGGGGACGTGGAGGTGAAGGACGTCGGTATCATCACGCCGTACTC
GGCCCAAGTCAGGCTCCTGCAAGACGTCGTCGGCGCTTCAAGGCGCTCTT
CGGCAGCTGCGGCGGCAGCAGCTGTTGCAAAGGCAACGGATTCCAGCGAT
TCTGCGTCGGGTGACGAAGGCAGAGATGAGAGGGGGGACGGCCAGGAGAG
GGAGTGGGCGGGGCGGGGGCACCGGAGGCACACGGTGGACCTGCCCGAGA
TTGCTTCTGTCGACGGGTACCAAGGACGAGAAAAAGAGGTGAAGGACGTC
GGTATCATCACGCCGTACTCGGCCCAAGTCAGGCTCCTGCAAGACGTCGT
CGGCGCTTCAAGGCGCTCTTCGGCAGCTGCGGCGGCAGCAGCTGTTGCAA
AGGCAACGGATTCCAGCGATTCTGCGTCGGGTGACGAAGGCAGAGATGAG
AGGGGGGACGGCCAGGAGAGGGAGTGGGCGGGGCGGGGGCACCGGAGGCA
CACGGTGGACCTGCCCGAGATTGCTTCTGTCGACGGGTACCAAGGACGAG
AAAAAGAGGTCATTCTACTTTCAGCCGTGCGTTCCAACTACGGCGGCCGG
GTCGGTTTTCTCAGCGATTGGCGACGCCTTAACGTCGCCATTACTCGGGC
ACGCCGCGGCGTGGTCGTAGTCGGAGACCCAGACACGCTAGAAAGGGACC
CTCACTGGAGGGCTTTCTTGCGATGGTGCGACAGCCATGGTGCTGCCATG
GATGAATCTGCGCTTTACGGGGCTCGAGGGAGTGGAATCGGAGGGGGCAG
AGGTGGTGACGGAGACAACGAGGAGGGTTCTCGTGATGTGGTATAGGTCA
TTCTACTTTCAGCCGTGCGTTCCAACTACGGCGGCCGGGTCGGTTTTCTC
AGCGATTGGCGACGCCTTAACGTCGCCATTACTCGGGCACGCCGCGGCGT
GGTCGTAGTCGGAGACCCAGACACGCTAGAAAGGGACCCTCACTGGAGGG
CTTTCTTGCGATGGTGCGACAGCCATGGTGCTGCCATGGATGAATCTGCG
CTTTACGGGGCTCGAGGGAGTGGAATCGGAGGGGGCAGAGGTGGTGACGG
AGACAACGAGGAGGGTTCTCGTGATGTGGTATAG
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