prot_H-paniculata_contig2575.7015.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2575.7015.1
Unique Nameprot_H-paniculata_contig2575.7015.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length235
Homology
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: D8LKL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL3_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 5.160e-86
Identity = 154/275 (56.00%), Postives = 180/275 (65.45%), Query Frame = 0
Query:    1 MLQGKVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLRSFQQMLRERESNELCQCYRKIVRRAAKQGHEVFAVLTHVDAYTPDEDSDADDDDVAAGGAENGEEIGEWSPEHSPEIHLLEGERRSSAEVSVEDG-----------------------------------------GESGFDREADMSGILSLWREELSQALSGEGMAVLPSQNVFAVENYHKGSASQNPVVDLASLECLENVIEAGSRYVDMRYQQQQEGCTVV 234
            MLQGKV+EGS +D+QN KYWFM+GNFGFFST SLAA+PHVVVLVFDVTLRSFQQMLRE E+NELC+CYRKIVRRAAKQGHEVFAVLTH+DAY PDED ++   D      E G E  +   E +     LE     SAE S  DG                                         G   FDREA++ GI+SLW E LSQAL  +  A LP +NVFAV+NYH+GS++Q+PV+DLA LECLE+V+ AG RYVD RYQQQQEGC + 
Sbjct:  211 MLQGKVEEGSAVDKQNYKYWFMLGNFGFFSTASLAAAPHVVVLVFDVTLRSFQQMLREPEANELCRCYRKIVRRAAKQGHEVFAVLTHIDAYAPDEDDESTSSDWEE--EEEGTEA-DTEAETATXXXSLE----QSAEASPGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGEFDREAELPGIISLWCEGLSQALGNDPEAPLPKENVFAVQNYHQGSSAQDPVLDLACLECLESVLHAGGRYVDDRYQQQQEGCVIA 478          
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: A0A835Z504_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z504_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.240e-40
Identity = 99/255 (38.82%), Postives = 140/255 (54.90%), Query Frame = 0
Query:    1 MLQGKVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLRSFQQMLR--------------ERESNELCQCYRKIVRRAAKQGHEVFAVLTHVDAYTPDEDSDADDDDVAAGGAENGEEIGEWSPEHSPEIHLLEGERRSSAEVSVEDGGESG--FDREADMSGILSLWREELSQALSGE------GMAVLPSQNVFAVENYHKGSASQNPVVDLASLECLENVIEAGSRYVDMRYQQQQEGCTV 233
            +L+GK+  GST + +N +YWFM+G FG    +SLA++PH VVLVFDVTLRSF+ MLR              +++   L +CYR ++RRA + G EVFA LTHVDAY PDE+ D+D D  A             +P++                  V+D G     F+RE DM  ++  W+ EL +AL G       G   L  Q+VFA+ENY    ++++  +DLA+LE LE+V+ AG  ++  R  Q   GC V
Sbjct:  378 LLEGKLLPGSTAESRNYRYWFMLGQFGIGPISSLASAPHAVVLVFDVTLRSFEAMLRTCGCDTANGSGQQPQQQPPALVRCYRSVLRRARQYGLEVFAALTHVDAYEPDEELDSDSDSDAT------------TPKN------------------VQDNGPPPMTFNRERDMPALIERWQHELCRALCGSHNPPKSGPGFLVPQHVFAMENYRASKSARDTGIDLAALEFLESVVAAGHTFISSRCNQ-PAGCIV 601          
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: A0A7S2UWS0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWS0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.130e-22
Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = 0
Query:    5 KVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLRSFQQMLRERESNELCQCYRKIVRRAAKQGHEVFAVLTHVDAY 92
            ++ EGSTLDR+N +YWF +G  GFF  TSL  SPHVVVLVF+ TLRS ++M   + S+   +CYR+++ +A  +G EVF  LTH+D +
Sbjct:    1 QLAEGSTLDRENFRYWFTLGQLGFFVRTSLDTSPHVVVLVFNATLRSVKKMADGQASSAQLKCYRRVISQAQSKGLEVFIALTHLDLW 88          
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: A0A7S2STS1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STS1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 4.360e-17
Identity = 69/234 (29.49%), Postives = 109/234 (46.58%), Query Frame = 0
Query:    1 MLQGKVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLRSFQQML----RERESNELCQC-------YRKIVRRAAKQGHEVFAVLTHVDAYTPDEDSDADDDDVAAGGAENGEEIGEWSPEHSPEIHLLEGERRSSAEVSVEDGGESGFDREADMSGILSLWREELSQALSGEGMAVLPSQNVFAVENYHKGSASQNPVVDLASLECLENVIEAGSRYVDMR 223
            +L G   EGS  +++NL+YWF +GN GFF   +L ASPHVV+LVFDV LRS ++M+    R  E +            Y  +VR+A ++G  V    TH+D +                  E+   +G+ + +   E           A + V      G  R+ D    +    E+LS A    G + +P  ++F VENY     + +  V+LA+LE LE +++    ++  R
Sbjct:  237 LLHGTALEGSNQEQENLRYWFFIGNMGFFEKRTLDASPHVVLLVFDVMLRSTRRMIAAVRRASEHSASASANSPQFDLYCAVVRQAQREGLAVHVAFTHLDVFEE----------------ESKTRLGKAAQDPETE----------DASLPVAQDTRVGELRKED----IRTMGEQLSAAFEAAGTS-MPPDHIFVVENYRAEKRATDHRVELAALELLEALVDDADAFLRQR 439          
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: A0A812RI62_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RI62_SYMMI)

HSP 1 Score: 80.5 bits (197), Expect = 1.110e-14
Identity = 37/100 (37.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 MLQGKVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLRSFQQMLR--------ERESNELCQCYRKIVRRAAKQGHEVFAVLTHVDAY 92
            ++ G +KEGS+++ QNL+YW  +G+ GFF +++L  +PHV++LVFD +L+S  ++L         E +  +L  CY +++ RA ++  +VF  LTH+D +
Sbjct:  127 IVSGVLKEGSSVEEQNLRYWITIGSLGFFESSNLHDTPHVILLVFDASLKSLHKVLNVDFSDHEWENKVPQLA-CYHRVLDRAKEKELDVFVCLTHIDVF 225          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LKL3_ECTSI5.160e-8656.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z504_9STRA1.240e-4038.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UWS0_9STRA3.130e-2251.14Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2STS1_9STRA4.360e-1729.49Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A812RI62_SYMMI1.110e-1437.00Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..234
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2575contigH-paniculata_contig2575:11268..17115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2575.7015.1mRNA_H-paniculata_contig2575.7015.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2575 3278..18028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2575.7015.1 ID=prot_H-paniculata_contig2575.7015.1|Name=mRNA_H-paniculata_contig2575.7015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=235bp
MLQGKVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLR
SFQQMLRERESNELCQCYRKIVRRAAKQGHEVFAVLTHVDAYTPDEDSDA
DDDDVAAGGAENGEEIGEWSPEHSPEIHLLEGERRSSAEVSVEDGGESGF
DREADMSGILSLWREELSQALSGEGMAVLPSQNVFAVENYHKGSASQNPV
VDLASLECLENVIEAGSRYVDMRYQQQQEGCTVV*
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