mRNA_H-paniculata_contig2575.7015.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2575.7015.1
Unique NamemRNA_H-paniculata_contig2575.7015.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: D8LKL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL3_ECTSI)

HSP 1 Score: 534 bits (1375), Expect = 4.110e-181
Identity = 287/463 (61.99%), Postives = 329/463 (71.06%), Query Frame = 1
Query:    1 TVQTWGPEAFARRTRTKIHNFGAPLPPWEDKTARPTPAAKGIPKSINIILLGPTGSGKSSLIYTWWRALSGSVTCKEEFLEANVHDSFLQRLKVGWNAQDGASSDGASSLRRRKTSALISSGTNGSTSTSPPSPVSGGLLAAVPRHGTTTLDAFQLQAPNPYRGSGGITVHDTKGQQFFTEEEERFAEQMLQGKVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLRSFQQMLRERESNELCQCYRKIVRRAAKQGHEVFAVLTHVDAYTPDEDSDADDDDVAAGGAENGEEIGEWSPEHSPEIHLLEGERRSSAEVSVEDG-----------------------------------------GESGFDREADMSGILSLWREELSQALSGEGMAVLPSQNVFAVENYHKGSASQNPVVDLASLECLENVIEAGSRYVDMRYQQQQEGCTV 1266
            +++TWGPEAFARRTRTKIHN GAPLPPWE K  RPTPAA+GIPKSINIILLGPTGSGKSSL+YTWWRALSGSVT KEEFL  +VHDSFLQRL+VGWNA++G  +   +           +  T  S+   P +P  G LL A PRHGT  LDAFQLQAP+P+RG  GITVHDTKGQQFFTEEEERFAEQMLQGKV+EGS +D+QN KYWFM+GNFGFFST SLAA+PHVVVLVFDVTLRSFQQMLRE E+NELC+CYRKIVRRAAKQGHEVFAVLTH+DAY PDED ++   D      E G E  +   E +     LE     SAE S  DG                                         G   FDREA++ GI+SLW E LSQAL  +  A LP +NVFAV+NYH+GS++Q+PV+DLA LECLE+V+ AG RYVD RYQQQQEGC +
Sbjct:   22 SLETWGPEAFARRTRTKIHNLGAPLPPWESKEQRPTPAARGIPKSINIILLGPTGSGKSSLVYTWWRALSGSVTGKEEFLAEHVHDSFLQRLRVGWNAKEGEEARQRAQXXXXXXXXXPALATGASSVAPPTAPGGGALLKAAPRHGTKGLDAFQLQAPDPHRGCTGITVHDTKGQQFFTEEEERFAEQMLQGKVEEGSAVDKQNYKYWFMLGNFGFFSTASLAAAPHVVVLVFDVTLRSFQQMLREPEANELCRCYRKIVRRAAKQGHEVFAVLTHIDAYAPDEDDESTSSDWEE--EEEGTEA-DTEAETATXXXSLE----QSAEASPGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGEFDREAELPGIISLWCEGLSQALGNDPEAPLPKENVFAVQNYHQGSSAQDPVLDLACLECLESVLHAGGRYVDDRYQQQQEGCVI 477          
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: A0A7R9U7I7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7I7_9STRA)

HSP 1 Score: 251 bits (642), Expect = 2.490e-73
Identity = 164/433 (37.88%), Postives = 220/433 (50.81%), Query Frame = 1
Query:    4 VQTWGPEAFARRTRTKIHNFGAPLPPWEDKTARPTPAAKGIPKSINIILLGPTGSGKSSLIYTWWRALSGSVTCKEE--FLEANVHDSFLQRLKVGWNAQ--DGASSDGASSLRRRKTSALISSGTNGSTSTSPPSPVSGGLLAAVPRHGTTTLDAFQLQAPNPYRGSGGITVHDTKGQQFFTEEEERFAEQMLQGKVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLRSFQQMLR-----ERESNELCQCYRKIVRRAAKQGHEVFAVLTHVDAYTPDEDSDADDDDVAAGGAENGEEIGEWSPEHSPEIHLLEGERRSSAEVSVEDGGESGFDREADMSGILSLWREELSQALSGEGMAVLPSQNVFAVENYHKGSASQNPVVDLASLECLENVIEAGSRYVDMRYQQQQEG---CTV 1266
            V+ WGPEAFA+R R ++ +    LPP  +++      +  +P+  N++LLGPTG+GKSSL+YTWWRAL+G+   ++   FL+   H S L+RL++GW A+  D   SD                                  L+A PRHGTT L AF+LQA +     G I +HDTKGQQFFTEEEE FA  ML+GKV  GST D  + +YW  +G FG F TT+LA++PH +VLVFD TL+SFQ +L      E + NEL  CYRK+V RA  +G  VFAVL+HVD                 G    GE++ E          LL G R                        +L  ++E LS AL  E  AV P   ++ VENY      Q+  +D  +LE L+  +   + Y+  R      G   CTV
Sbjct:   18 VEAWGPEAFAKRLRARLKSAQVQLPPELERSD-----SSELPRGFNVLLLGPTGAGKSSLVYTWWRALAGTQAREDRASFLKNFAHHSLLRRLQLGWTAESEDAGRSD---------------------------------QLSAAPRHGTTALTAFELQAASD--ACGHIQIHDTKGQQFFTEEEESFANDMLEGKVLPGSTPDAVHWRYWISIGQFGLFVTTNLASAPHALVLVFDSTLKSFQTVLADAKAGEADDNELAACYRKVVSRARAEGQPVFAVLSHVDQLQ------------VRGTPAEGEDVDELE-------ELLIGSRDE----------------------VLERFKELLSAALKDEDAAV-PVHQIYCVENYRMDRFEQDAEIDFRALEALDAAVGGANTYIAKRAVDVNAGRGLCTV 368          
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: A0A835Z504_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z504_9STRA)

HSP 1 Score: 242 bits (617), Expect = 3.930e-67
Identity = 159/391 (40.66%), Postives = 209/391 (53.45%), Query Frame = 1
Query:  160 TGSGKSSLIYTWWRALSGSVTCKEEFLEANVHDSFLQRLKVGWNAQDGASSDGASSLRRRKTSALISSGTNGSTSTSPPSPVSGGLLAAVPRHGTTTLDAFQLQAPNPYRGSGGITVHDTKGQQFFTEEEERFAEQMLQGKVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLRSFQQMLR--------------ERESNELCQCYRKIVRRAAKQGHEVFAVLTHVDAYTPDEDSDADDDDVAAGGAENGEEIGEWSPEHSPEIHLLEGERRSSAEVSVEDGGESG--FDREADMSGILSLWREELSQALSGE------GMAVLPSQNVFAVENYHKGSASQNPVVDLASLECLENVIEAGSRYVDMRYQQQQEGCTV 1266
            T S K  LIYTWWRALSG     + F     H   + +L +GW   D A SD   +                 T   PPS     +L A  RHGTT L+AF+L+   P  G  GI VHDTKGQQFFT EEERFAE +L+GK+  GST + +N +YWFM+G FG    +SLA++PH VVLVFDVTLRSF+ MLR              +++   L +CYR ++RRA + G EVFA LTHVDAY PDE+ D+D D  A             +P++                  V+D G     F+RE DM  ++  W+ EL +AL G       G   L  Q+VFA+ENY    ++++  +DLA+LE LE+V+ AG  ++  R  Q   GC V
Sbjct:  269 TQSFKPCLIYTWWRALSGD----KGFEATAAHADLMGKLNLGWELGDVADSDDPKA-----------------THVVPPS-----VLEAAARHGTTRLEAFELRPAGP-SGVAGIAVHDTKGQQFFTHEEERFAEHLLEGKLLPGSTAESRNYRYWFMLGQFGIGPISSLASAPHAVVLVFDVTLRSFEAMLRTCGCDTANGSGQQPQQQPPALVRCYRSVLRRARQYGLEVFAALTHVDAYEPDEELDSDSDSDAT------------TPKN------------------VQDNGPPPMTFNRERDMPALIERWQHELCRALCGSHNPPKSGPGFLVPQHVFAMENYRASKSARDTGIDLAALEFLESVVAAGHTFISSRCNQ-PAGCIV 601          
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: A0A812RI62_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RI62_SYMMI)

HSP 1 Score: 147 bits (370), Expect = 2.040e-36
Identity = 93/248 (37.50%), Postives = 140/248 (56.45%), Query Frame = 1
Query:  124 IPKSINIILLGPTGSGKSSLIYTWWRALSGSVTCKEEFLEANVHDSFLQRLKVGWNAQDGASSDGASSLRRRKTSALISSGTNGSTSTSPPSPVSGGLLAAVPRHGTTTLDAFQLQAPNPYRGSGGITVHDTKGQQFFTEEEERFAEQMLQGKVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLRSFQQMLR--------ERESNELCQCYRKIVRRAAKQGHEVFAVLTHVDAY 843
            +P   NI LLGPTG+GKSSL+YT WRA++      E   +  +    ++ L+VGW   D   SD ASS          S   NG    S PS      L A  +HGT  L +  +Q  +P      I + DTKGQQFF E+E  +A+ ++ G +KEGS+++ QNL+YW  +G+ GFF +++L  +PHV++LVFD +L+S  ++L         E +  +L  CY +++ RA ++  +VF  LTH+D +
Sbjct:    5 LPPGWNIALLGPTGAGKSSLVYTLWRAINA---IDEHHPDVAMK---VEALQVGWTKAD---SDTASS----------SDSGNGGDMPSTPS-----TLQAKAQHGTRILSSVIIQEESPEHSQ--IRIQDTKGQQFFDEKEASYADAIVSGVLKEGSSVEEQNLRYWITIGSLGFFESSNLHDTPHVILLVFDASLKSLHKVLNVDFSDHEWENKVPQLA-CYHRVLDRAKEKELDVFVCLTHIDVF 225          
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: A0A7S2STS1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STS1_9STRA)

HSP 1 Score: 151 bits (381), Expect = 9.130e-36
Identity = 139/447 (31.10%), Postives = 198/447 (44.30%), Query Frame = 1
Query:    4 VQTWGPEAFARRTRTKIHNFGAPLPPWEDKTARPTPAAKGIPKSI----------NIILLGPTGSGKSSLIYTWWRAL----SGSVTCKEEFL----------EANVHDSFLQRLKVGWNAQDGASSDGASSLRRRKTSAL-ISSGTNGSTSTSPPSPVSGGLLAAVPRHGTTTLDAFQLQAPNPYRGSGGITVHDTKGQQFFTEEEERFAEQMLQGKVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLRSFQQML----RERESNELCQC-------YRKIVRRAAKQGHEVFAVLTHVDAYTPDEDSDADDDDVAAGGAENGEEIGEWSPEHSPEIHLLEGERRSSAEVSVEDGGESGFDREADMSGILSLWREELSQALSGEGMAVLPSQNVFAVENYHKGSASQNPVVDLASLECLENVIEAGSRYVDMR 1236
            ++ WG  AFAR  R ++              AR     +G+P+            N+++LGP GSGKSSLIYT WRAL    SG+ T  E             E+   +     L       DG SS  A  L      A+ +S G    T TS         L A  RHGT  L    +  P+      GI+VHDTKGQQFF + E R A  +L G   EGS  +++NL+YWF +GN GFF   +L ASPHVV+LVFDV LRS ++M+    R  E +            Y  +VR+A ++G  V    TH+D +                  E+   +G+ + +   E           A + V      G  R+ D    +    E+LS A    G + +P  ++F VENY     + +  V+LA+LE LE +++    ++  R
Sbjct:   50 MEVWGAPAFARAIRGRL-------------VARQLCDGEGLPQGTSTRLPSPPRWNLLVLGPAGSGKSSLIYTLWRALHHHESGTRTQSEALGGQDPEASTGGESQSPEDSSPCLGSAHQPADGPSSSVADDLPAEDKMAVELSLGWEAPTGTS---------LRA--RHGTKGLRVVDILEPDGCHA--GISVHDTKGQQFFDDAEGRHAGHLLHGTALEGSNQEQENLRYWFFIGNMGFFEKRTLDASPHVVLLVFDVMLRSTRRMIAAVRRASEHSASASANSPQFDLYCAVVRQAQREGLAVHVAFTHLDVFEE----------------ESKTRLGKAAQDPETE----------DASLPVAQDTRVGELRKED----IRTMGEQLSAAFEAAGTS-MPPDHIFVVENYRAEKRATDHRVELAALELLEALVDDADAFLRQR 439          
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: A0A6H5K4Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Q7_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.150e-23
Identity = 57/91 (62.64%), Postives = 62/91 (68.13%), Query Frame = 1
Query:  409 GGLLAAVPRHGTTTLDAFQLQAPNPYRGSGGITVHDTKGQQFFTEEEER--------------------FAEQMLQGKVKEGSTLDRQNLK 621
            G LL A PRHGT  LDAFQLQAP+P+RG  GITVHDTKGQQFFTEEEER                    FAEQMLQGKV+EGS +D+QN K
Sbjct:    5 GALLKAAPRHGTKGLDAFQLQAPDPHRGCTGITVHDTKGQQFFTEEEERCGATALFGGMVGKVGMLHNGFAEQMLQGKVEEGSAVDKQNYK 95          
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: A0A7S2UWS0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWS0_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 4.510e-20
Identity = 45/87 (51.72%), Postives = 62/87 (71.26%), Query Frame = 1
Query:  583 VKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLRSFQQMLRERESNELCQCYRKIVRRAAKQGHEVFAVLTHVDAY 843
            + EGSTLDR+N +YWF +G  GFF  TSL  SPHVVVLVF+ TLRS ++M   + S+   +CYR+++ +A  +G EVF  LTH+D +
Sbjct:    2 LAEGSTLDRENFRYWFTLGQLGFFVRTSLDTSPHVVVLVFNATLRSVKKMADGQASSAQLKCYRRVISQAQSKGLEVFIALTHLDLW 88          
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Match: A0A1R2AUX5_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AUX5_9CILI)

HSP 1 Score: 62.4 bits (150), Expect = 1.050e-6
Identity = 62/250 (24.80%), Postives = 106/250 (42.40%), Query Frame = 1
Query:  124 IPKSINIILLGPTGSGKSSLIYTWWRALSGSVTCKEEFLEANVHDSFLQRLKVGWNAQDGASSDGASSLRRRKTSALISSGTNGSTSTSPPSPVSGGLLAAVPRHGTTTLDAFQLQAPNPYRGSGGITVHDTKGQQFFTEEEERFAEQMLQGKVKEGSTLDRQNLKYWFMVGNFG-----FFSTTSLAASP------HVVVLVFDVTLRSFQQMLRERESNELCQCYRKIVRRAAKQGHEV-FAVLTHVD 837
            +P ++NI+L GP+GSGKSSL+ T++R+   +    +E     +H                                L+  GT+ +                    GTT      ++  N      GI +HDT+GQ +   +E+  A+ +LQGKVK+ S ++++N +Y +++  F       F T  L  SP      H ++ +FD +L            +E    Y +I++ A  +G+     VLTH+D
Sbjct:   58 LPNAVNILLFGPSGSGKSSLLRTFYRSYHNTRELPDE-----IHHK------------------------------LVVKGTSHN-------------------EGTTLYTTVVIKPENG--NENGIRIHDTRGQIWMDVKEKAQADLLLQGKVKDLSKVEQRNHRYAYLLWEFWKKDTQLFPTEILKNSPGLTDKPHCLLFIFDGSLEDIPN------GDEETAFYHEILQLAKSKGYYYPQIVLTHID 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2575.7015.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LKL3_ECTSI4.110e-18161.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9U7I7_9STRA2.490e-7337.88Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835Z504_9STRA3.930e-6740.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A812RI62_SYMMI2.040e-3637.50Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S2STS1_9STRA9.130e-3631.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5K4Q7_9PHAE1.150e-2362.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UWS0_9STRA4.510e-2051.72Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A1R2AUX5_9CILI1.050e-624.80Uncharacterized protein n=2 Tax=Stentor coeruleus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2575contigH-paniculata_contig2575:3278..18028 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-16_003400.1
Exons10
Model size2185
Cds size705
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2575.7015.1prot_H-paniculata_contig2575.7015.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2575 11268..17115 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929764.1958802-UTR-H-paniculata_contig2575:3277..34401622929764.1958802-UTR-H-paniculata_contig2575:3277..3440Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 3278..3440 +
1691481000.7400272-UTR-H-paniculata_contig2575:3277..34401691481000.7400272-UTR-H-paniculata_contig2575:3277..3440Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 3278..3440 +
1622929764.208683-UTR-H-paniculata_contig2575:3772..38671622929764.208683-UTR-H-paniculata_contig2575:3772..3867Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 3773..3867 +
1691481000.7545214-UTR-H-paniculata_contig2575:3772..38671691481000.7545214-UTR-H-paniculata_contig2575:3772..3867Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 3773..3867 +
1622929764.2200205-UTR-H-paniculata_contig2575:4356..44991622929764.2200205-UTR-H-paniculata_contig2575:4356..4499Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 4357..4499 +
1691481000.7635334-UTR-H-paniculata_contig2575:4356..44991691481000.7635334-UTR-H-paniculata_contig2575:4356..4499Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 4357..4499 +
1622929764.2313707-UTR-H-paniculata_contig2575:4751..49041622929764.2313707-UTR-H-paniculata_contig2575:4751..4904Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 4752..4904 +
1691481000.7714956-UTR-H-paniculata_contig2575:4751..49041691481000.7714956-UTR-H-paniculata_contig2575:4751..4904Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 4752..4904 +
1622929764.245569-UTR-H-paniculata_contig2575:11254..112671622929764.245569-UTR-H-paniculata_contig2575:11254..11267Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 11255..11267 +
1691481000.7795525-UTR-H-paniculata_contig2575:11254..112671691481000.7795525-UTR-H-paniculata_contig2575:11254..11267Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 11255..11267 +
1622929764.3712401-UTR-H-paniculata_contig2575:17115..180281622929764.3712401-UTR-H-paniculata_contig2575:17115..18028Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 17116..18028 +
1691481000.8432024-UTR-H-paniculata_contig2575:17115..180281691481000.8432024-UTR-H-paniculata_contig2575:17115..18028Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2575 17116..18028 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929764.2565243-CDS-H-paniculata_contig2575:11267..113201622929764.2565243-CDS-H-paniculata_contig2575:11267..11320Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 11268..11320 +
1691481000.7890162-CDS-H-paniculata_contig2575:11267..113201691481000.7890162-CDS-H-paniculata_contig2575:11267..11320Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 11268..11320 +
1622929764.2673635-CDS-H-paniculata_contig2575:12655..127251622929764.2673635-CDS-H-paniculata_contig2575:12655..12725Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 12656..12725 +
1691481000.7993195-CDS-H-paniculata_contig2575:12655..127251691481000.7993195-CDS-H-paniculata_contig2575:12655..12725Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 12656..12725 +
1622929764.2831633-CDS-H-paniculata_contig2575:13689..138011622929764.2831633-CDS-H-paniculata_contig2575:13689..13801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 13690..13801 +
1691481000.8075042-CDS-H-paniculata_contig2575:13689..138011691481000.8075042-CDS-H-paniculata_contig2575:13689..13801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 13690..13801 +
1622929764.2979016-CDS-H-paniculata_contig2575:14287..145401622929764.2979016-CDS-H-paniculata_contig2575:14287..14540Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 14288..14540 +
1691481000.8158197-CDS-H-paniculata_contig2575:14287..145401691481000.8158197-CDS-H-paniculata_contig2575:14287..14540Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 14288..14540 +
1622929764.3148384-CDS-H-paniculata_contig2575:15447..155571622929764.3148384-CDS-H-paniculata_contig2575:15447..15557Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 15448..15557 +
1691481000.8244789-CDS-H-paniculata_contig2575:15447..155571691481000.8244789-CDS-H-paniculata_contig2575:15447..15557Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 15448..15557 +
1622929764.349439-CDS-H-paniculata_contig2575:17008..171151622929764.349439-CDS-H-paniculata_contig2575:17008..17115Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 17009..17115 +
1691481000.8337-CDS-H-paniculata_contig2575:17008..171151691481000.8337-CDS-H-paniculata_contig2575:17008..17115Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2575 17009..17115 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2575.7015.1

>prot_H-paniculata_contig2575.7015.1 ID=prot_H-paniculata_contig2575.7015.1|Name=mRNA_H-paniculata_contig2575.7015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=235bp
MLQGKVKEGSTLDRQNLKYWFMVGNFGFFSTTSLAASPHVVVLVFDVTLR
SFQQMLRERESNELCQCYRKIVRRAAKQGHEVFAVLTHVDAYTPDEDSDA
DDDDVAAGGAENGEEIGEWSPEHSPEIHLLEGERRSSAEVSVEDGGESGF
DREADMSGILSLWREELSQALSGEGMAVLPSQNVFAVENYHKGSASQNPV
VDLASLECLENVIEAGSRYVDMRYQQQQEGCTVV*
back to top

mRNA from alignment at H-paniculata_contig2575:3278..18028+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2575.7015.1 ID=mRNA_H-paniculata_contig2575.7015.1|Name=mRNA_H-paniculata_contig2575.7015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14751bp|location=Sequence derived from alignment at H-paniculata_contig2575:3278..18028+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCGTGCAGACTTGGGGCCCTGAGGCATTCGCACGCCGCACGCGGACCAA GATACACAACTTTGGCGCCCCTCTACCGCCCTGGGAAGACAAGACCGCGC GCCCGACCCCGGCGGCCAAAGGCATCCCGAAGTCCATCAACATCATTCTT CTCGGTCCCACTGGTACGCGAAAACAGAGAGGGAGAAACGAAACGAAACC AGTTATCATTGGTTATATGCTAGCTCAACCACAAAAGGCGCTTGATCGTC GATCCCTTATTATTTCGACGTTTTTAGGGCTATCCTTCTTTTTCTTGTTT TTCTTCGCCATTATTTTTTTTCATTTTTTCATTTTTTTTTCTTGTTGCCA TCACAACAACAATGTTATTTTCTATTTTATAGTAGCACAAGCACAGCGTG TGTTAACTCACTTTTTTTGCAGAATAAATTTTTCAACCATTTCAGCATCC GCCTGTCCAACCTCTTTTTTTTGTTAAAACGTGAATTGCCGGCAGGTTCA GGAAAGTCATCGCTCATCTACACGTGGTGGCGAGCGCTGAGCGGCAGCGT AACGTGTAAAGAGGAGTTCCTTGAGGCAAATGTGCATGACGTGAGTCTTC AGTACGGCCAGAGGCGATATTTTAGGACGATACGGCATTTTGGTAGGGTC GTAATAATACATAGAGTCCAGGTGATGGAGTTTTGGTGTGAAAACGGTAA TAGTATTCGAAGTGTGTGACAAATAACCGTCACGTACGTACTGCATCTCG AATTAAAAAATTGTCATGTGTGATGAAAATTAGTTCAGAAGTTAAAACAT CTTCGACGGTTTGGTGCAGGAATCTAAGCTTACTTCTTGAAATAGTGCCG TTTTGGCGTTGGGATATGTCACATCTTTTTTTTCATCCATTGGTGCAATA TTCAATATTTTCATGTACTGTTTTTGTCGCTTGATTTCTCGGAATCACAG AAAGAGAAAATGGTAAACAATACTAGGTGTGTGGGCTGCCTTCCTAGGGT AGTTTTTTAACAGCACATAGGATGGATAATAATTATTGTTTGACCTACGA ATCGATTGCCTTCCCCCTCACTACAAAAGTCTTTCTTGCAGAGGTTGAAA GTGGGGTGGAATGCTCAGGACGGCGCCAGCAGCGACGGCGCCAGCAGTCT ACGCCGACGGAAAACAAGCGCCCTGATTAGCAGCGGGACCAATGGCAGCA CTAGCACATCACCGCCGTCGCCGTCCTCATCCTCCACTAAGCCTAACAAA AACACACAATCACCACCACCACCATCATCATCGTCGTCCTCGTTGTCGTC GTTGTCATCAGCGGCCCTACTGCCCCCACCCCCCAAGACTGCTATACGAG CGGGAGGAGTGCTGTCGCCTCGACTCAAACCCCCAGAACAGGTCGCTGTA GGAGCAGGAGCAGGAGCAGTAGCAGCAACAGTAGACAGCGGTGGACAGAG CAAGAGCGCGGGGGGGGTAGGGAGGGTGAGCGGGGGGTTGCTCGCTGCGG TGCCGAGGCATGGGACAACTACGCTGGATGCGTTTCAGCTACAGGCGCCC AATCCGTACCGGGGGTCTGGAGGAATCACGGTGCATGACACCAAGGGGCA GCAGTTTTTCACAGAAGAGGAGGAAAGGTGACTGTTAATCGGTGTCTCTC GTAAATTACCCTGTTTTTTTTGTTTTTTTCACGTGGATATTTATCTAGCT GTCATGCGTTAAAATAGTTTTCATATATTTGGCCAGTTTTGGTTGGTTTT GTATATGAATGTGCCCTAATTCTTGAGAAAAAATGCAGCTTTTTGTCCTG TAGGCATAAATTCATGTATTTATCATGTATGGAGTTCTTGATTTTCTGTC ATGAGTGTCTCGTGTCATTAAAACCGTATTTTGTTCTCAGCTCCCTACAA TTATCGAGTAAAAGCCTATGTTTATGTCTCGTCCTACATTTCGGGCCCTT CACAAGGGTACCTACCTACCGTAACACCGCTCAACTGGTTCGGCCGAACC GGGGTGGCGCCTACCCCGGAGAGGAATAAATAACTCTGTTCTGTTAAAGG AAATGTAGAAATACCTTGGTAAAATACTCAAGTATGCAAGCATCGGTAAA GTTTTTGCCTCAGCCTTCCGGAGGTTAGAAAAAAAAACACCGCTCAACCC TTTGATTACTTACCTCCCCCTCGAAGCATTTTTCAAACCAGATTTTCTCG GAAACAGGAAAACGAGTGATATCGAAAGCCGTTTGCCGTTGGAAAGATGT TGTCGAGATTTGGCTACAGAAATTCCTTTTTGGCAAGTGCTTTGGGGTAG TTGCGGGACCGTGCTTGTCGAGAAAATCGACTTCCTAACACATATGGAGG GGGATGCGTAATTCAAGGGTTTTACCTGTACCTACTTGTTTACTATTTCT TGTGGATGGAAAATGACTCATGAAACCAAGCAAACGGCTCCAGGTGTGTA CGTGTGATCGCAACAAGAGGAGCATTAATACAACATCGTTGCTGCTAACA ACGTTTTTGAGTAGTCATTCCAAGCAGCGTAGTGGCTCCAAAACGACCCT TCTGATACATCGTAAAATAGCTCCAGTGGGAAAGTGTGGAGGCGATGGTG GTGGAGGTGGTTCCTTGATTATCAGTCCGGTTAGATCTCACGAAAACAGA GGTGAAGTGCAAGTGCTAACATGTACGTGGATGTGGTGCGATTTGCCGGC CGACAGGACCCACAGATCGTTTTTTTCAAATAATATATTTCTCTGGAAAA CGCTGCTATTATATACATGGGCGATTCCTTCTGTCTTGAGAGTATTTGTG TGTGTGTGTGTGTGTTTTTGTTATGTGCCAGGAGCTGTGAAGTAACGCCC GAATAAAATACTTTGGAGTACCTGGAATATTTTAGATGAAAGTTGAACAG ATATTCGTCCGAATTTCGGCATTTGTGGGCAGATACGGTCCATTTATTCA ATTTTGTTCCAAAGCTGAATCTCACGAATGAAGAAGAGTTAGCGAGTGCC AACGGTATCCTTGTCACGCTGCGGTCACTAAGTGTCTGCGTCCGCAAGTA AAATTGATAATCGGACTAGTTGGGGTTAATTTTCAGGAGCCAAAATATTG GATTGAGTCTGGTGCCAAATTAGCAAAATTTGTTCGAACAGTTTTGAAGG GTGATTTTTGAGTGATTCTCGACGAGTTTTTCCTAGGTGACACGAATAGG GTGAGAAAAGCACCGAATGCATCGGACTCCTCAGATCAGACTGGGGATAC TCAAGGTTTCAAAATTAAAAAAACGAAAAAAAAGTATAGTCTATGGATCA AGGGTAACCCCTGGTTTTGGCCGGACTCTAGAGTCAACAAATTGGCACTT ATCTCCGTTCGCAGGTGGAAAAATTTGACCGGAACCGTCGATTACCGCAC CTCTTGCAAGCATTGATGATGGCATTTTTTCCGACAAAGAAAAGCGTAAT TTTTCACCAATATATATAATTTTTTTGTAAAGATATGAGGGGCGCAAGAT GAAGAGTCGTTCAAATGCGTGGTCTACAAGTTCTTCCGAAAAACAGCACC CACGAAAAATGCAAACAAACTACCCGCACGTTCTGGAAAAAAAAAACGCG CGCGATAACAAGAAAGAGAACAAAATAAAATGCCCCCGCTATTATTTCCG TGTAAAGACGCGCACTTTCGACTTTTTTTTCGGATTTTCATGTGGACACT CTTACCCCGAGATAAAACCGGATATGTTATCTTGGAGTTTTGAAAAAAAA AAATGGGGTCAACCGGCCCAATAACAAGATTTTTTATTGTGTCTGGTGAG ACCCAAAACCTTACCTTGGCAAAATCACGAGGGGTAAGGAATCCGGGTGT AATTTGGGCCCCAATTCTTATGGGTTGGCATACAGTGAGTCTCAGTTTCT TGATAGCTTGATTTCTTGCGATCAGGCTGGTACTGTGCCATCGAACGAAG TGAAAGCATTGACTCCGCTCTTTATTCGTTTAAATCCCGTTTCTAGTAGC CGTAGAGTTTCCTCGTGGTTCACATGGGAAAAATGTCTCATGCAGAACCG TCGGACGAATACTTGAAAATAGTGTTCTGAACCATTCGAAGTGAAGTTGT GACCGCCATCATCACCCCTTCTTGTAACTGCACTAGAATAATTATTAGGG TAATCTACAGGAATAGGTATACCTGGACGTTTTGGGGCGAAGAAAAGGTA CATCTGAGTGACTGAAACAGCCCCAGAACGTTTGAAGTTACAACCGTACC TGACCGACACCGGCATTTCACTGGTTTTGCCCGAAACTCTACCTATTCCG GGCGATTTCCAAGAAGACAAGATGTCAACATTTACGTTACTACAACAGTG GCAAAACATTGATGCTAAGGCGGGTGCTGCTCGAAAAGTAGTCCCGACAA CAACACATGTGTTAAAATGTGTTCCGATATCTGATCCCGAAGTACGACTG TTTAAGCATAAAATAGCCTGATGCATGTTGTGCTGCACAGTTTGCCCGAG GCAGAGCCGCGACGGACAATCCGTCGACGGACAAACACAAACTGGCACAA AGAGGACGAAACTCTTGGATAACTTGAAAGCTCTTGTATCTCACCCATGA CTGTGACAAATCATCGGGATGTATCGCATAATATCCACCCTTGACTTCAA TGCACACGCAGTGCGTACCATACATACGGTTCAATACGGTACAGTACGAG ACAGACATTTACATATGGACTTAAGACATTTTGGATACATGTATGTATAT ATATATATATATATATATGCAGCTTGTATAGCTACTACTGTACGGGGTAG GAATATGAAGGCACGTTACCCCAAATCAAACCGTTTCACAACTCCAGCAA GTTTAAGTGCACAACAAGATACTGTACTACACAGGGTATACGGAACTGTG CTACTGCACCGCACTGTTCATCAACAGACGGAGGAGGGGGCAAAAGGAAC AGGGGGGAGGCGTTCGATGACCCAACGTGTGATGCAGTGTGTCGTGTGCC TTGGCAGAGCCCGTTAAGAATGGTGGTGGCGGCGGGTGGTAGCAGAGGGA GGATATGTGATTCTTTAAAATGATTTGTGACAGTGGCCGCCGCCGTCATG GGATTTTGTAGTTGTCGAATAGTTTCGCCCTCTTTGTGCCTGTTCGTCTT TGTCCGGGCACGGGTTGTCCGTTGCGGCTCTGCCCTCGGGCAAGCTGTGC AGTACAACATGCAGTGGGCTATTTTCTCCTTGAGTTATACTTCGAGATCG GATATCGGAACACATTTGAACTTTTGTGCATGTGTTGTGGTCGAAACTAC TTTTCGAGTAGTGCCTGCTATGGGAAGAATGACCCATCGCTGTTTTGCCA TAAATGCTGACATCTTGTCTTCTTGGAAATCGCCCCAAACAGGCCCAGTT TCCGGCAAAACCAATCGAATGCCAGTGTCAGGTGTCCTTGGGGGAGAGAA AAGATCTGAAACAGAGAAGAGGAAAACCCCCATGTCAATACCAGTACAGA TAGGTCAGCACACATCACACCATTTCTTTGGCAGTAGACACATTTCGCAA TTAGCGGCTGCAGCGGATCCCCCACGACGAGAACAAAATAGTAAGGAGTC TTGTGGAGGTCCCCAAGCCCGGAGCTATGGCATCGGCTGAAAAATACGAG AGAAAAAATCAAGAGAAGAAGAAAGAAACAGAAAACAATGAGGTGTAACT CGTATAATAGGAGTATATCCCCCCTCCTCCCACGGTGTACAATTATTTCG CATTGTCGCCGAGCTAGTAACTCCCCGGGCGAACTTGTTGTACTGGGAAG CTTCGAACTGCCCCTTCTCCTTCGCCCTGTTTCCCCCTTCTCCCCCTCAA AGTGGCACAGCTATTTCCTGTTGTTGCCCTTCATCCCAGGTGAAAATTTA ATCCCTACTAATAGAGTGGGCATATTTCTGTCCCTGGTTACACAAATATT GGTTCAGTCAGTGACAGATGCTGAATCCGTCGAATCAAATCCATCATCTT CCTTCCTATCTTTCTGCCCCAATTTTTGTCGACGCGAATCGTAATTTCAC CGTCGACCCAGTTACCAGTCCTTTCCTGCACATATCAGGGGTGTATCCAG TTTTCGCTTATGCCCCATTCCGTCAGCCGCGAAATTGCTGCCTTCTCTCC TGTCGTTGACCTCGTATATTCTATGTTTCTCGTCCCACTCCAGAATCTCC TCTATTCCAGTTGTAATCCTGTCGATCCAACAGCCAATCCTCTTTATTCC TCCCCATCAAGATGCTTGGCCATATTTGTGTACCACTTCCCCCGCCTATC CAGCCTCAGGCCCATATTGCTGCCTCCCCTCTGACTATTTGGGCAGCTCT TTAACTGGCGCTCCCAGCTTGTTAAGGACGCACCATTACAGTCCTCCGTC CCGAAACACTTTAACCACTAGATTTCGCGGCCGACAATTTAGGTGGTATC CAGCCTTTCGACCTATCAGACCTCCCCCCCGGAATTGTGATAAAGAAGGC TGTAGCGATTCTAGAACGTGGAAATTAGCCTTATCACGTGAGGATTGAGA TGAATAAGGTAGGAAAAATATTTTTGAGTCACATTTGGCAATATGGGAAA GAGCCATCGGCCATCATAGACCACTCTGACAGGTTAAAAGCTTGGTCCTT TCGAGGACTACATGTGTGGTCAAGGTTCTAACAACTACGACACGCAAAGC ATGAAAGACGTCCCCCGCCTGTCCCAGAACAAACGAACGCAAAGCCAAAC AGCAAAAGACAAAAAAAACAAGGAAGGAATAAAACGAAAAAATGCACAGG AAGAGCAAGGACAGTGATAAATTATCACAGGACGTACAGCAGACCAAGAC AGGACGGAAATATAATCAATACGACACGGACAACACAAGGAAAAGGAAGC GCGCAGATGTACGGGGGGGGGGGGGGCTGTCGGATTCGTTGCGGTGCTGG GAAATTATACAACTGTCAATGTTAATGTTCGGTTTTGATCGCTTTTAGAT ATATACCAGTAGCACCAATGGGTGATGTGATTTGTCATTTCTGTCAACAG AATACAACCGGTGCGCCTTATTATATATGCTCTGGTCATGTCTTTGTATA TGTTTTTTTCAATTTAGGATTTTTTTTTTAATTTGCTTTTCCATGTACAG CGTATAATTATCATTTTAGTACCCAGCATCATTTTGGTTTTGAGGCTGCT GCTTGGTATTGGCATTTTGTTGATGTAGTTTGGTTAGTATTATTTCTTGC TATTTATTGGTGGGGTGGTTCGATTTAATTAAATATTTATTTTTGTAGAA ATAAAGAATTGAGTAGCCTTAATCCTTATGTTAATTTCTACAATACAGCA AAAAATTTGAGATTGCCGTTCTGGAGAGACCGTCATCCTCTTTCACTCAC CCACCCCTACGGTAATTTCTGTTTTATTAAGGGGGGCCAGTCCACATCCT AATTGTTCTAATAACATACGCTTCCTACAGTATTTGGTAATGTTGAAGAG TCGCTTCAATTGGAGAATAATCCGAGTCGAATAGCGTTATTATTGTTCTT CTTCTTATTATTATTTTTATTTTTTATTTTTTTCATGTCTGTTGTGTTTT CTGATGGATCCAAGAACCTGTACCTTTATTTGGTTTATTGTAAAATCGTT GTTCCGCATATGTAACGGCTATTTAGCAACACTTGCGGCGACCTATTCGA CTTGGGCCCGAAAGTGCTGTGGTGGACTAAGTCGACTAATTTGGCTGAAG GGCCTCATGACGCAGCAAAAGACTCGACTACAACGACTCGTTGGGTGTGT GGATTTCCCCCCCAAAATGTCATTGAAGCATGGAACACTGCATGATATGT TCAATTTTAGCAGCCCGAAAGAGGCCTGGTACATGACCCGAAAGATAAAA ATACCATATCTGTATTTTTTGTTTTGACGGATTCGTGTCTTATCTCCCAA ATCTTGATCCCTTCGTGCTTTCCACAGGTTTGCGGAGCAGATGCTGCAGG GCAAGGTCAAGGAAGGCAGCACTCTTGACAGACAGAATTTAAAGTGAGAC GTCTAAGATCTGGGTGAATTAACAGATGGAGTTGGTGAAAAAAAAAAAGT TAAGCGGATTACACGACTGGAAAAAACAAGCGGGTTAAAATAAAATAATC ACGAAACGAAATGTAGTCTACACAGAAGAGGAGAGTAACTCCTGACTGTC TTTCGGTGTTATTGAGATTAATTTCGTGTTATTTTTGGAAAATAACCAAG TACACCCACTGATATGTTTGTGTGTGTATATAAATACATATAAACAATAC GTTTTATGTAGAGTTACCATCATGGCAGGGGGGAGAAAAATGCGTTATTT ACTGCAAGTTTCTCATACCTTACTTAAATAGGGGTTCCCATACCAAATCT CAATGTTAATGGAAGAGTTCTCAGCTAATTAAGGTGCCGTCCTCTCTGAA ACATCGTGTACAGGGTTACGTTGTAGAGGGGTAACTTATATGGGGCCATC TGCTGTAGGTTATGGAACGCGAAGGGTAGACGAGGTGATGACCATAGGAC GGGTTTGGTTTTTTATACTCGTAGGCAGGCCGCAGCTGTGCTGTTAATAG TTATGTTACAAACTCAGACCTCTTGTGACGGGCTGTCATCCACGACTTAC GATGGCGTGTTGAGTGTCAAGTACACAGGTATTTATGATGGTTTTTTTTT GTGGATTTTTTTTTTTTTTTTGTGCTTCACTTACGCAGAAGACGAGCTGT ATAGGTGCATGGCGGGTTGGTCATTTGTGTGCGACCCGTTAGCAAAAGTG TTCGAGGTTCGCAAGTCGGATGTATGTAATAGAAGTAGGTCACAAAATAT ATTTGCTTCATATGAAAAGGGTGTTCTGTGCTGTACGGACTCTAGTGGTG ATTATCCCCTTGTTCAGGGTACTCTGGACATTTACAGTAGATATGTAAGT GTATATTTTTATACATTCGAGTGTGATAAAAAAACACAGTTTTTCCTGGT CAGGTAGGCAGAGTAGTTCACGTGCTGTTTCCATTTCAGACTGTTGTACA GTGAACGAGTCCTGGTACTTGGTCATCGGACAGGGTGACTTATAGTTGAT TTCAAGGAGGGTTGTCCTGTAAAGGAAGAGTTTGTGTGGTATATACCCTA GTAAGAATCCCGAATCATGCATCCAGGGTGTGAACGTGTTGAACGCAGTT GTTGTATAGACGTTTAAGCAGAAGTCTCCCCCGGCTAATCAGCGCTCCCC AGTTAGTTCAGTTTGTGGGTAACAACTAAGTAATCCAGCAGCTTGAAGAT GCTGAGCATACCTTCATTTTGTTTCACGGTAATTAGTGCAGCCGCTGTCC GCCGCCCCACATCCCGCTTCCCTTTAAGGTATTGGTTCATGGTTGGAAAT TTTGGGTTTTTCAGCACGACGAGCTTGGCAGCATCTCCGCATGTCGTGGT GAGTGCTGACGTCAGACTGTATGATGACAATACATACTGCCAAAAAAGAA GAAAAAAAGTCGTTCGATGGAGCAAAGAAAATCGTCCCTTGTGTTGATAA GATTATAGGTTCGGGTGGTGCGGCGATAACGGAATCGCCACCACAGCAGG CTCTTTATTTCTTGTCATTTTGTATTCAGGTTTTGGTCATATCATTACGC GATATTGTAAATAGTACGAGGTTGCTGCCTCTGATTCGGCAGCGCTCAAT GAGTGACAGCTGAATCAATGAATAATGACCAATTTAGTGGAGTGGAGTGA GCGAGGGTGGGAAACGCTGTCTGTACTGTCTGTAAGGTACCTATCCGTAA TGTCTTGCGTATCGAACCAATATTATTGGACAGGCTGGCAAGACGGAATG GGCGGATGCCCGAAAGTGAACAACGAAGATCCTGCTCTGATGGGTCACTC GCGAAACATGTATCTATTGCCTCTGTCTATCATCAACACAGCGGCGGCCC AGAAAAGCTACAAACGTAGACAGCTAAGCAACGACAAAGTTCGTTGGGCT GATGCGGCAGTGCTTGATAGATACCCTCAATGCCAAGAAACAAAGGCAGC CCCTAAAGGTTTTGTATCCCTATTGAGAGACGCTTGAGGCATCCCGCGTG CGATGTCTTCGTTTGTGGGAACTGCTAAGAGATAGAGGACCCTAAAGATA TCTTGTGTAAACTGAGATCGAAACAAGTAGCACCCGATGTGCTAAATGGA GATAGAGAGTTTGAAGGAAGGCTACTATGACGTTTAAAAAAAGCGCCAAT CTAGGGTGTACATTGTTTTTGCGATCAGCGCAACAGCGTATATTTCTTAG GGGTATTGTTTAACAATTTTAAGATGTGCACGACTACTCTATGTTTTGTT ACGCGTCTAATGTTCTTTATTGATGTTGGGGTAGTGACTTCCTCCATTTT TGGTTTTGTCAGGTGCTGGTATTTGACGTGACGTTACGAAGTTTCCAGCA AATGCTAAGGGAGCGAGAGTCGAATGAGCTGTGCCAATGCTACCGAAAGA TTGTACGAAGAGCCGCGAAGCAAGGTGTAGTGTTTCTCTACTATTTTCTA TTTTTGACTCTTATTTTTTCTTCATGCTCTTAGCCGTGTAAGAACTAGAT TTTCCGTCATAGCCAGAAGCTAGATTTGCCAACGGCCAGTCGTTAATAAC GAATTTTCCGACAGAATACTGTAGTCGGCTCTTCTCAGGTGCCGAGGGAG GCATTTTTTTCCGTCTGAGAGCTCTTACCTTAGATTTAGTGTAGAAGAAG CACGGGCACAAACCGACTTCTTCCGAAAGGGTTGAATAATAATGGAGTCA GAAGTTCCTAAGGGGCTAGCGTCGTCGTTTACATGCCACCTGGTAGTTAC AACACTGAATAGCTATAGGTTATCATACTTATCCCCGTGATGGTACATAA AATGTACAAGATATTAAACCAAAACATTCATCAACGCCGGACGTCTGTTT CTGTCTCGCGGTTTCTTCATTTTCGAAAAAAAAACCCAAAAAAAACGAAA TGATAAATAGGCCACGAAGTGTTCGCGGTTTTGACTCACGTCGACGCTTA CACGCCTGACGAAGATAGCGATGCCGACGATGACGATGTAGCAGCAGGAG GGGCGGAGAACGGCGAGGAAATTGGAGAATGGTCCCCGGAACATTCCCCG GAAATTCACCTGCTGGAAGGCGAACGCAGGAGTAGTGCCGAAGTTAGCGT CGAGGACGGTGGGGAGTCGGGGTTCGACCGAGAAGCGGATATGTCGGGCA TTTTGTCTCTGTGGTGAGTTCCGCGCTACATTCCATAGGTGAACCTGGAA CCTGGAAGGGTGTAACAGCATGAGGAGGTTACGACTCTCAAGGATACAAA ATTATGCATGTGTTACTTTTTTGTATATGATTTTTATGGTTGTCGAAGAT TCAGAGTATGTCCCGATTTGGTCCAAGTTTGCTTCCCCCCCCCCCCCCCC CCATACGTTTGTTCTGTTTGTGGAAGAGTAATCCAGCAGCTTAGGGATGC TAAGCATACCTCCCTTCTGTTTACGGATTTTGTCATGTTTCTACAGTAAA ACTTTAGTGGTGTATGCTTGCTTGTACGTTTAACTTCTCTATTCTGTGGT ACTATTGGAAACTGCATTCTCGTCGTGTAGACACCGTCCTCCTGATTCAT CTGTCCTTGGCAATTGATGCGCGTGGTGCCCTACTGACCACCACCACGTC GTGATGTGGTAACGTCAATATCTTCGTACCTTTGCCCTTTTCAAGCCTAT GACGTGCTAGTCAGCTGTGATTTTTTTTTTTTTTTTTTCCCGGCCATTGC GAAGCCAGCTCTATGTTTCGCACGTTCTCGGTGCGCACTAAATCCTAGAA TATCAGGCCCCAATCGTCAAAAAATGACCCCGTTTCGGACCTAGGATGAG ACAATGGTCAGCTGTGTAGACAGTTGTCTACGCATGTGGCGTGTTTTGTC ATCGCTTGCGATTGGTCGTAAGAACACAATTATTTTTTTCATGGAGGTTT GGCAGTTTTTTTCGTTGCTATATTCCCACCCGCCCTCTCCCCGCCGTGTT GAATTCCTCTTTTCTCGATCCGATATTTGTAGGTCTGCCTTAAACCCGCT TTTTTTTTTCTTCTCTTTTCGCGTTGATTGGCTGTTGATTCATGTTCGTC ACGACGTCAAAACTAAATAGGCGTGAAGAGCTCTCCCAGGCGTTGAGTGG TGAAGGCATGGCGGTGTTGCCGTCGCAAAACGTCTTCGCCGTGGAAAACT ACCACAAGGGCAGTGCGTCGCAAAACCCCGGTGAGGGCGATCGGCACGCG TTGCTTTGTTCCAGTCTTGTTTGTTCCGGGACGGGTAAAGCGGGGAGCGG GGGCCGGTAATATTTAGCTGAAACGATCCTAAAAATAACCCATGTTGAGG TCATGCAGCTGACCTAAAAAATCATTGTATACGCTTATCAAGAAAATTAA ATAAGAAAGGGGGCGGGGGGGGGGGGGGTAAGGAGGAATATAGGTAAATC GTCCGACGGACGAAGATGTGTTGACGGGTCGATCTCATTTACTGTCTTTC GCGTCGATCTCAATCTCAACTGATTTTGGTACGAACAAAACAGTTGGTTG TGGTTAACTACCCTACACTCCATGATGAAGGCCAGATATGTGCTTATGAA ATATTTAAAAGAAGCTTTTGCGGTACAGTGCGCCGGCAGTGTTTGTCTTG TCCCCCAGATGCCCCAGCGTACTGACTGAAGGTATTTGAGTGAAGTAGTT TAGTGAACAGCGTTGTTTGAGAAGTGAGTTGTGACGAGTTTTTAACAAAT GCGTGTGCATGCATAGCGCAAATGGATTATTACATGGACGAAACTGAAAG GGGGGCAGAGGCGGCGGCGGCGGGAGGGGGGGGTGCAATGGCAATGCGTG AATCTGGATGCACAATTTAACCAAGTTGAAGGCAAAGAGGTACTTCTATT GTAGGGGTGTACCGTGGTCGGACTTCAATTATGAGCTCGGAGTCATGGCG AATAATATGGCGAGAGAAATGGTACTTTGCTCAAGGGGGTGGCAGGGGGG GGGGGGGAGGGGAGGATACCTTCCCAATCGTGTATGAATCATGGATGGTC CAGCAGTTCAGGGTTATTCCCATACAGCGTAATTGTTTTTTAGCGTTTGT ACAGTTTGTACCACCATACCATGCATGTGAACCTATTCAATCTTGGAACA CTCAGTTCCCACGCACGACTGGCTCCCGCGGAGGTAATGCTTCGGGCGTA GTCCCAGAGTTTATGTTTTGGAATGTAGTGTGGAGTGCAAACAGCTTTCA CCCTGTACGTGGAGTTTATGAAAGAGACTGGGACGTCATGTGGGTCGGCG ATGGCCGCAAATCTTTTTCGATATGAGGCAATTGTGCCGATGGATGCTGT GTATGGAATCGCTATTCAGCAAACACTGGGATAGTGGCTTCACAATATTA GTACACTGTATCGATTACTCAAATAATGGGACATTCGGCTAATTGTTTCG GAAAGTTACGCCTGATGTTGGCAAAAATATATGAGCACTTCTGCTAGTGT GGTGCACTGTTGATATTCCGAACAATGTCTCATGAATCGTTTGTTCAAGT GACATGGTATATGGATTAATGTGCTAGCCTTATCCCGTTTTCTAGCCTCT CCATTTAGTTTGCCATGGCTCTGACCTATTTTGTATATATGTATCTTTTT GTCGTTTTTCTTTTGCATTTTTCACCGACAGTTGTCGACCTGGCTTCGCT GGAGTGCCTGGAGAACGTTATAGAGGCAGGATCGCGCTACGTCGACATGC GATACCAACAACAACAGGAGGGCTGTACCGTCGTCTAGAAAGACACACAA TCTAGGTTTATTTTGGGTTTTCAGAGCGTAATAACCAACGGAAAAAAAAT CATTTAGTCTTTGTCTGTAGGGGGGTGTTTTTCCCGATGGAGAGTTGTAC TAACCTGTACCCCCACGTTACCGAGAGTCGATTTTGCTCTGTTTGCAGGA ACAACTTTGGCGGGATGTGACAAATTACACCACTTAATACCTCCCCGTGT TTTCGTTTTTGAGCCACGTGTCGGTTGAGAATATAGGAAATAGTGCCCTC GGGGAGGGGGGGGGGTTATTGAGTACTGAGATCTGCTGTAAGATGTATAA ATCGCTCAGGTGGCCATGCCGTTTGCGCGCTTATCGATTCGTCGACGGTG CGCTATATAAAAAATACCGTGGAATTGGTTTTGCAATGCTGCACGAAGCG GATGTTGCATCCATGTTTGCGTACGGTTTGTTTCTTTCGCGTTGTACGTT TAACATTTTATTTAATGCAGTGTGATCGAGCCCCCCCAGGAAGAGGTTTA GTGATAGTAACTATAGTGGTAGCAGTAGTCGGCCGGGAGTGGCAGCAATG GGCGAGGGTACTCAGTGGATGTCCAGAGTACGTGAATGAGATCCAAACTG AATACACGTATTGTTCCTTTTTTAGACAATTTTTGAGCGTGTTTTGAACA TGTATTCAATTTCATTTCTGACGAACAGTGAACACAGCATATATATGTAT GTTATGCAGCGTGTGTAACGTGCCATGGAGTATATCCATGGACTGTCCAT GAACACATACATGGTGTTGAACTGATGGGTGTAGAGCTTAGACATTTTTC TGGTAACTTCACGTGTCAGGAATAATGCCATGGAAAGCACCCCTACGTGA GCATGATTGGGGAGGGGATGGAATATTTTCATCCGCGGAGGGTCATGAAC C
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2575:3278..18028+

>mRNA_H-paniculata_contig2575.7015.1 ID=mRNA_H-paniculata_contig2575.7015.1|Name=mRNA_H-paniculata_contig2575.7015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1410bp|location=Sequence derived from alignment at H-paniculata_contig2575:3278..18028+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGCAGGGCAAGGTCAAGGAAGGCAGCACTCTTGACAGACAGAATTT
AAAATGCTGCAGGGCAAGGTCAAGGAAGGCAGCACTCTTGACAGACAGAA
TTTAAAGTATTGGTTCATGGTTGGAAATTTTGGGTTTTTCAGCACGACGA
GCTTGGCAGCATCTCCGCATGTCGTGGTATTGGTTCATGGTTGGAAATTT
TGGGTTTTTCAGCACGACGAGCTTGGCAGCATCTCCGCATGTCGTGGTGC
TGGTATTTGACGTGACGTTACGAAGTTTCCAGCAAATGCTAAGGGAGCGA
GAGTCGAATGAGCTGTGCCAATGCTACCGAAAGATTGTACGAAGAGCCGC
GAAGCAAGGTGCTGGTATTTGACGTGACGTTACGAAGTTTCCAGCAAATG
CTAAGGGAGCGAGAGTCGAATGAGCTGTGCCAATGCTACCGAAAGATTGT
ACGAAGAGCCGCGAAGCAAGGCCACGAAGTGTTCGCGGTTTTGACTCACG
TCGACGCTTACACGCCTGACGAAGATAGCGATGCCGACGATGACGATGTA
GCAGCAGGAGGGGCGGAGAACGGCGAGGAAATTGGAGAATGGTCCCCGGA
ACATTCCCCGGAAATTCACCTGCTGGAAGGCGAACGCAGGAGTAGTGCCG
AAGTTAGCGTCGAGGACGGTGGGGAGTCGGGGTTCGACCGAGAAGCGGAT
ATGTCGGGCATTTTGTCTCTGTGGCCACGAAGTGTTCGCGGTTTTGACTC
ACGTCGACGCTTACACGCCTGACGAAGATAGCGATGCCGACGATGACGAT
GTAGCAGCAGGAGGGGCGGAGAACGGCGAGGAAATTGGAGAATGGTCCCC
GGAACATTCCCCGGAAATTCACCTGCTGGAAGGCGAACGCAGGAGTAGTG
CCGAAGTTAGCGTCGAGGACGGTGGGGAGTCGGGGTTCGACCGAGAAGCG
GATATGTCGGGCATTTTGTCTCTGTGGCGTGAAGAGCTCTCCCAGGCGTT
GAGTGGTGAAGGCATGGCGGTGTTGCCGTCGCAAAACGTCTTCGCCGTGG
AAAACTACCACAAGGGCAGTGCGTCGCAAAACCCCGGCGTGAAGAGCTCT
CCCAGGCGTTGAGTGGTGAAGGCATGGCGGTGTTGCCGTCGCAAAACGTC
TTCGCCGTGGAAAACTACCACAAGGGCAGTGCGTCGCAAAACCCCGTTGT
CGACCTGGCTTCGCTGGAGTGCCTGGAGAACGTTATAGAGGCAGGATCGC
GCTACGTCGACATGCGATACCAACAACAACAGGAGGGCTGTACCGTCGTC
TAGTTGTCGACCTGGCTTCGCTGGAGTGCCTGGAGAACGTTATAGAGGCA
GGATCGCGCTACGTCGACATGCGATACCAACAACAACAGGAGGGCTGTAC
CGTCGTCTAG
back to top