mRNA_H-paniculata_contig2570.7002.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2570.7002.1 vs. uniprot
Match: D8LLN5_ECTSI (Radical SAM core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLN5_ECTSI) HSP 1 Score: 585 bits (1509), Expect = 1.830e-200 Identity = 334/564 (59.22%), Postives = 381/564 (67.55%), Query Frame = 3
Query: 207 TRICCG-ALKRSSTTKEASVEKKLPTEAPAVNRAVIDPSITEWADRPLELDSWGKIMLKGLLFSELQQLMTNIGEKPGRAEILCGWLYHSGRLVRDVEETSG-------------ANSGHGDSF--QRHRIGWKTRENIRACATADGGLELEDVQLAADGTRKMVSILTCGEGEGKKIETVIIPMLRGPQRKPRYTVCVSSQVGCAMNCQFCYTGRLGLMAHLQTAQIVEQVISAKRYLESVGDPAPVSGVVFMGMGEPFDNYERVMRAVKILTDSRAGVRLKASKVTVSTVGLVPAIERFCTDPENGASLAISLHTVSDEVRDQVIPINRRYPLGQLGDSLRKHFPRRPEP---QPTWISAERSESHCPDSVPALG---------------------------------------FIPVP---------------------KKRRRVNRILAVEYTLMRGVNDSPADAERLAEWLKGISCVVNLITFNPHDGTPFSRSSVATLKAFREVLLERGQLCTYRDSRGDDGMAACGQLGGESMHGRG--TRPPVAVKWKPTV*PRRA 1655
T + CG +LKR T AS + + E P V+ +D T WA + ELD GK+MLKGLLFSE QQLM +GEK GRAE+L GWLYH RL+RD+ ET+G +N+ S + RIG KTR+ +R ATADGGLELEDVQLAADGTRK+VS+LT GEG GKK+ETVIIPMLRGPQR+PRYTVCVSSQVGCAMNCQFC+TGRLGLMA+LQ AQIVEQV+ AKRYLE+VGDP+PV+GVVFMGMGEPFDNY+RVMRAVKILTD RAGVRLKAS VTVSTVGLVP IERFC DP NGASLAISLH+V DEVRD++IP+NRRYPL QL ++LR HFPR +P +PT ++ + + S PALG IP K RRR RILAVEYTL+ GVNDS DA RLAEWL+G++CVVNLITFN H GTPFS SS +AFR L RGQLCT+RDSRGDDGMAACGQLGGESM G G R PV V WK T P A
Sbjct: 43 TSLSCGRSLKRPRTDMMAS-DSLVAVEQPVVDE--VDGQAT-WA-KDFELDFHGKVMLKGLLFSETQQLMERLGEKAGRAEVLAGWLYHDRRLIRDIAETAGGAGSAEPGGDATNSNTNRSGSLVSSKSRIGKKTRDAVREVATADGGLELEDVQLAADGTRKLVSVLTSGEGAGKKVETVIIPMLRGPQREPRYTVCVSSQVGCAMNCQFCFTGRLGLMANLQAAQIVEQVLVAKRYLETVGDPSPVTGVVFMGMGEPFDNYDRVMRAVKILTDPRAGVRLKASSVTVSTVGLVPQIERFCKDPANGASLAISLHSVVDEVRDKLIPVNRRYPLEQLSETLRTHFPRSSKPAADEPTGVALDHASSAA---APALGPKDVATGSAERKSMAGPGRKLEQETNLLARRDGAERRPPSIPTEPQQRPRSLADGGGSKREGPQRKGRRRRPRILAVEYTLLGGVNDSLGDAGRLAEWLEGVACVVNLITFNAHAGTPFSPSSPEAAEAFRRALAARGQLCTFRDSRGDDGMAACGQLGGESMAGGGDRARKPVPVTWKSTDTPSTA 598
BLAST of mRNA_H-paniculata_contig2570.7002.1 vs. uniprot
Match: A0A061QU93_9CHLO (23S rRNA (Adenine2503-C2)-methyltransferase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QU93_9CHLO) HSP 1 Score: 350 bits (899), Expect = 3.140e-110 Identity = 195/421 (46.32%), Postives = 260/421 (61.76%), Query Frame = 3
Query: 354 DSWGKIMLKGLLFSELQQLMTNIGEKPGRAEILCGWLYHSGRLVRDVEETSGANSGHGDSFQRHRIGWKTRENIRACATADGGLELEDVQLAADGTRKMVSILTCGEGEGKKIETVIIPMLRGPQRKPRYTVCVSSQVGCAMNCQFCYTGRLGLMAHLQTAQIVEQVISAKRYLESVGDPAPVSGVVFMGMGEPFDNYERVMRAVKILTDSRAGVRLKASKVTVSTVGLVPAIERFCTDPENGASLAISLHTVSDEVRDQVIPINRRYPLGQLGDSLRKHFPRRPEPQPTWISAERSESHCPDSVPALGFIPVPKKRRRVNRILAVEYTLMRGVNDSPADAERLAEWLKGISCVVNLITFNPHDGTPFSRSSVATLKAFREVLLERGQLCTYRDSRGDDGMAACGQLGGESMHGRGTRPPV 1616
D G +MLKGL F L++ + GEKP RA L W+Y+ +R E+ +G++S SF R R+ + AT DGGLEL DV A+DGTRK+V ++ G G K+E V+IP+LR RK R T+CVSSQ+GCAMNCQFC TGR+GL +L TAQIVEQ++ A+RYL SVGD P++ VVFMGMGEP N + V+ A I G+ + +K++VSTVGLVP +ERFC E+ A LA+SLH +DEVRD ++P+NRRYP+ +L SLR FP S + + S R + +EY ++RG+ND+ DA RL E L+GI +NL+ FNPH GT F+ S+ + FR +L++ G++CT RDSRGDD MAACGQLG G G PP+
Sbjct: 91 DKNGLLMLKGLTFEGLEEWCVSKGEKPSRALQLWRWMYYDNMWMRCFEDAAGSSSS---SFGR-----AFRDKVEPLATVDGGLELADVHEASDGTRKLVFRVSEGPAAGGKVEAVLIPILRSSGRKERITLCVSSQLGCAMNCQFCLTGRMGLGGNLLTAQIVEQLVEARRYLASVGDKTPITNVVFMGMGEPLHNLDAVLAATSIFCHPM-GLHMSHNKISVSTVGLVPEMERFCR--ESSAQLAVSLHATTDEVRDWIVPVNRRYPIHELMASLRSLFP----------SQDGAGS--------------------TRRHVLIEYLMLRGINDTEDDARRLLELLEGIEAKINLLIFNPHVGTMFAASTDEQIARFRSILIQGGRVCTVRDSRGDDQMAACGQLGDPVQRG-GPLPPI 469
BLAST of mRNA_H-paniculata_contig2570.7002.1 vs. uniprot
Match: A0A8J4CAH3_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CAH3_9CHLO) HSP 1 Score: 337 bits (863), Expect = 1.370e-104 Identity = 195/466 (41.85%), Postives = 272/466 (58.37%), Query Frame = 3
Query: 255 ASVEKKLPTEAPAVN-RAVIDPSITEWADRPLELDSWGKIMLKGLLFSELQQLMTNIGEKPGRAEILCGWLYHSGRLVRDVEETSGANSGHGDSFQRHRIGWKTRENIRACATADGGLELEDVQLAADGTRKMVSILTCGE------GEGKKIETVIIPMLRGPQRKPRYTVCVSSQVGCAMNCQFCYTGRLGLMAHLQTAQIVEQVISAKRYLESVGDPAPVSGVVFMGMGEPFDNYERVMRAVKILTDSRAGVRLKASKVTVSTVGLVPAIERFCTDPENGASLAISLHTVSDEVRDQVIPINRRYPLGQLGDSLRKHFPRRPEPQPTWISAERSESHCPDSVPALGFIPVPKKRRRVNRILAVEYTLMRGVNDSPADAERLAEWLKGISCVVNLITFNPHDGTPFSRSSVATLKAFREVLLERGQLCTYRDSRGDDGMAACGQLGGESMHGRGT---RPPVAV 1622
AS PT A AV+ ++++P ++ ++ RP D G++MLK L EL++ +IGE P RA+ L WLY + + +R++++ G F + + + A+ +GGL+L+ + A DGTRK+V L GE G +ETV+IPM + RYT C+S+QVGCAMNCQFCYTGR+GL+A+L TAQIVEQV+ A+RYL P ++ +VFMGMGEP NY+ VM A++IL G+ L +K+ VSTVGLVP + +F A LA+SLH +DEVRD ++P NRRYPL QL +LR+ F P +R+ + + +EY L+ GVND+ DA+RL I C+VNLI FNPH+GTPF RS+ +++AFR V L G+ CT R S+GDD MAACGQLG ++ R RPP A+
Sbjct: 70 ASRRATAPTLAAAVDLSSLVEPPLS-FSHRPGLFDEAGRLMLKNLTLPELEEWCLSIGEPPKRAKQLYRWLYGNRKWIRNLDQADGDPQAFSSEF---------KSKVFSGASLEGGLQLQSIHTARDGTRKLVFALLEGEHGSPAGGTHGTVETVLIPMTNRSGQNLRYTACLSTQVGCAMNCQFCYTGRMGLLANLATAQIVEQVVEARRYLAEQSVPIRIANIVFMGMGEPLHNYDAVMAAIEILA---TGLELSRNKIIVSTVGLVPEMRKFIA--AGTAKLAVSLHATTDEVRDWIVPTNRRYPLDQLLGALREAF--------------------------------PYDKRKGDNFVVIEYVLLAGVNDTLEDAQRLLAITTDIYCLVNLIVFNPHEGTPFRRSTEESVRAFRGVFLAAGRPCTVRTSKGDDEMAACGQLGDVNLSARPAPMLRPPEAL 488
BLAST of mRNA_H-paniculata_contig2570.7002.1 vs. uniprot
Match: A0A2K3E2V3_CHLRE (Radical SAM core domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E2V3_CHLRE) HSP 1 Score: 326 bits (836), Expect = 6.620e-101 Identity = 188/435 (43.22%), Postives = 253/435 (58.16%), Query Frame = 3
Query: 354 DSWGKIMLKGLLFSELQQLMTNIGEKPGRAEILCGWLYHSGRLVRDVEETSGANSGHGDSFQRHRIGWKTRENIRACATADGGLELEDVQLAADGTRKMVSILTCGEGEGKK---------IETVIIPMLRGPQRKPRYTVCVSSQVGCAMNCQFCYTGRLGLMAHLQTAQIVEQVISAKRYLESVGDPAPVSGVVFMGMGEPFDNYERVMRAVKILTDSRAGVRLKASKVTVSTVGLVPAIERFCTDPENGASLAISLHTVSDEVRDQVIPINRRYPLGQLGDSLRKHFPRRPEPQPTWISAERSESHCPDSVPALGFIPVPKKRRRVNRILAVEYTLMRGVNDSPADAERLAEWLKGISCVVNLITFNPHDGTPFSRSSVATLKAFREVLLERGQLCTYRDSRGDDGMAACGQLGGESMHGRGT---RPPVAV 1622
D+ G++MLK L EL++ ++GE P RA+ L WLY + + +R++++ S +F + + + A+ GGL+L+ V A DGTRK+V L G+ EG +ETV+IPM + RYT C+S+QVGCAMNCQFCYTGR+GL+ +L TAQIVEQV+ A+RYL P++ +VFMGMGEP NY+ VM A++IL G+ L +K+ VSTVGLVP + RF A LA+SLH +DEVRD ++P NRRYPL QL +LR+ F P +R+ + + +EY L+ GVND+ ADAERL I C+VNLI FNPHDGT F RSS ++AFR V L G+ CT R S+GDD MAACGQLG ++ R RPP A+
Sbjct: 92 DAAGRVMLKNLPLPELEEWCASVGEPPKRAKQLYRWLYGNRKWIRNLDQADSDASAFSGAF---------KAKVASGASLAGGLQLQSVHTARDGTRKLVFALV-GDWEGGDGPAGSARGTVETVLIPMTNRQGQNLRYTACLSTQVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRYLAEQEVQIPIANIVFMGMGEPLHNYDAVMSAIEILA---TGLELSRNKIIVSTVGLVPEMRRFIASGR--AKLAVSLHATTDEVRDWIVPTNRRYPLDQLLGALREAF--------------------------------PYGKRKGDDFVVIEYVLLAGVNDTLADAERLLALTSDIYCLVNLIVFNPHDGTQFKRSSDDDVRAFRAVFLAAGRPCTVRASKGDDEMAACGQLGDVNLSPRPAPMLRPPEAL 479
BLAST of mRNA_H-paniculata_contig2570.7002.1 vs. uniprot
Match: A0A836CLG8_9STRA (Radical SAM core domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG8_9STRA) HSP 1 Score: 315 bits (806), Expect = 6.340e-99 Identity = 169/333 (50.75%), Postives = 214/333 (64.26%), Query Frame = 3
Query: 627 AADGTRKMVSILTCGEGEGKKIETVIIPMLRGPQRKPRYTVCVSSQVGCAMNCQFCYTGRLGLMAHLQTAQIVEQVISAKRYLESVGDPAPVSGVVFMGMGEPFDNYERVMRAVKILTD-SRAGVRLKASKVTVSTVGLVPAIERFCTDPENGASLAISLHTVSDEVRDQVIPINRRYPLGQLGDSLRKHFPRRPEPQPTWISAERSESHCPDSVPALGFIPVPKKRRRVNRILAVEYTLMRGVNDSPADAERLAEWLKGISCVVNLITFNPHDGTPFSRSSVATLKAFREVLLERGQLCTYRDSRGDDGMAACGQLGGESMHGRGTRPPVAV 1622
A DGT K+V + G G +ETV+IPML+GPQ+K RYTVCVSSQVGCAMNCQFC+TGR+GL+A+LQ AQIVEQV+ AKR+L +GD P++GVVFMGMGEPFDNYE V +AV+++T+ S G+RL A +VTVSTVG+VP I +FC DP A+LA+SLH D RD ++P+N+R+ L L QP P PA G R+L ++YTL+RGVN+S D RL + + CVVNLITFN H GTPF R+ T AF + G LCT R+S+GDDG +ACGQLG ++ R PV V
Sbjct: 3 AQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLM-------------QP------------PPGTPANGQ----------RRLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNMAIVAVAGRKPVPV 300
BLAST of mRNA_H-paniculata_contig2570.7002.1 vs. uniprot
Match: A0A8J4FD97_9CHLO (Radical SAM core domain-containing protein n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4FD97_9CHLO) HSP 1 Score: 321 bits (822), Expect = 1.680e-98 Identity = 185/450 (41.11%), Postives = 260/450 (57.78%), Query Frame = 3
Query: 303 AVIDPSITEWADRPLELDSWGKIMLKGLLFSELQQLMTNI-GEKPGRAEILCGWLYHSGRLVRDVEETSGANSGHGDSFQRHRIGWKTRENIRACATADGGLELEDVQLAADGTRKMVSILTCGEGEGKK------IETVIIPMLRGPQRKPRYTVCVSSQVGCAMNCQFCYTGRLGLMAHLQTAQIVEQVISAKRYLESVGDPAPVSGVVFMGMGEPFDNYERVMRAVKILTDSRAGVRLKASKVTVSTVGLVPAIERFCTDPENGASLAISLHTVSDEVRDQVIPINRRYPLGQLGDSLRKHFPRRPEPQPTWISAERSESHCPDSVPALGFIPVPKKRRRVNRILAVEYTLMRGVNDSPADAERLAEWLKGISCVVNLITFNPHDGTPFSRSSVATLKAFREVLLERGQLCTYRDSRGDDGMAACGQLGGESMHGRGT---RPPVAV 1622
++++PS + ++ RP D G++MLK L EL++ ++ GE RA+ L WLY + + +R++++ G F + + + A+ +GGL+L+ V A DGTRK+V L E G +ETV+IPM RYT C+S+QVGCAMNCQFCYTGR+GL+A+L TAQIVEQV+ A+RYL P ++ +VFMGMGEP NY+ VM ++IL G+ L +K+ VSTVGLVP + +F A LA+SLH +DEVRD ++P NRRYPL QL +LR+ F P +R+ + + +EY L+ GVND+ DA+RL I C+VNLI FNPH+GTPF RS+ +++AFR V L G+ CT R S+GDD MAACGQLG ++ R +PP A+
Sbjct: 87 SLVEPSFS-FSHRPGLFDEAGRLMLKNLTLPELEEWCLSVAGEPAKRAKQLYRWLYGTRKWIRNLDQADGDPQAFSAEF---------KSKVFSGASLEGGLQLQSVHTARDGTRKLVFALLGAEQGGPARGTHGTVETVLIPMTNRSGENLRYTACLSTQVGCAMNCQFCYTGRMGLLANLTTAQIVEQVVEARRYLAEQSVPIRIANIVFMGMGEPLHNYDSVMATIEILA---TGLELSRNKIIVSTVGLVPEMRKFIA--AGTAKLAVSLHATTDEVRDWIVPTNRRYPLDQLLGALRESF--------------------------------PYDKRKGDDFVVIEYVLLAGVNDTLEDAQRLLALTSDIYCLVNLIVFNPHEGTPFRRSADESVRAFRGVFLTAGRPCTVRTSKGDDEMAACGQLGDVNLSARPAPMLKPPDAL 489
BLAST of mRNA_H-paniculata_contig2570.7002.1 vs. uniprot
Match: A0A250XDL1_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDL1_9CHLO) HSP 1 Score: 314 bits (805), Expect = 1.920e-97 Identity = 172/404 (42.57%), Postives = 237/404 (58.66%), Query Frame = 3
Query: 366 KIMLKGLLFSELQQLMTNIGEKPGRAEILCGWLYHSGRLVRDVEETSGANSGHGDSFQRHRIGWKTRENIRACATADGGLELEDVQLAADGTRKMVSILTCGEGEGKKIETVIIPMLRGPQRKPRYTVCVSSQVGCAMNCQFCYTGRLGLMAHLQTAQIVEQVISAKRYLESVGDPAPVSGVVFMGMGEPFDNYERVMRAVKILTDSRAGVRLKASKVTVSTVGLVPAIERFCTDPENGASLAISLHTVSDEVRDQVIPINRRYPLGQLGDSLRKHFPRRPEPQPTWISAERSESHCPDSVPALGFIPVPKKRRRVNRILAVEYTLMRGVNDSPADAERLAEWLKGISCVVNLITFNPHDGTPFSRSSVATLKAFREVLLERGQLCTYRDSRGDDGMAACGQLG 1577
++ LK + + EL++ ++GE RA L W+Y G+ + ++E+T G +G F + + T GGLEL++V A DGTRKM LT G +G IETV+IP++R ++ R T+C+S+QVGCAMNCQFCYTGR+GL+ +L TAQ+VEQ++ AKRYL GD P++ VVFMGMGEP N E V+ A++I+ G+ + K+TVSTVGLVP I F + LA+SLH +DEVRD ++P+NRR+ L L L + FP I E +RI+ +EY ++RGVND+ DA RL L + +NLI FNPH GT F S + FR +L++ G++CT RDSRGDD MAACGQLG
Sbjct: 23 QLKLKSMTYGELEEWCRSVGESAKRAMQLWRWMYADGQWMSNIEDTVGTTTGFSQGFV---------DKFNSKITVSGGLELKEVVTAKDGTRKMAFKLTEGPAKGGVIETVLIPVVREAGQRCRITICLSTQVGCAMNCQFCYTGRMGLLGNLSTAQVVEQIVHAKRYLAEQGDRTPLTNVVFMGMGEPLHNMEVVLNAIEIMK-CPLGLHMSPGKLTVSTVGLVPEIREFVSRSSK-VQLAVSLHATTDEVRDWIVPVNRRHNLESLVSCLGELFP---------IDGEDR-----------------------SRIVLIEYIMLRGVNDTEEDAHRLLNLLSKVRAKINLILFNPHAGTKFLPSETEVVSRFRSILIQGGRVCTVRDSRGDDEMAACGQLG 383
BLAST of mRNA_H-paniculata_contig2570.7002.1 vs. uniprot
Match: A0A250X327_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X327_9CHLO) HSP 1 Score: 317 bits (812), Expect = 2.920e-97 Identity = 176/415 (42.41%), Postives = 249/415 (60.00%), Query Frame = 3
Query: 354 DSWGKIMLKGLLFSELQQLMTNIGEKPGRAEILCGWLYHSGRLVRDVEETSGANSGHGDSFQRHRIGWKTRENIRACATADGGLELEDVQLAADGTRKMVSILTCGEGEGK-KIETVIIPMLRGPQRKPRYTVCVSSQVGCAMNCQFCYTGRLGLMAHLQTAQIVEQVISAKRYL-ESVGDPA-----PVSGVVFMGMGEPFDNYERVMRAVKILTDSRAGVRLKASKVTVSTVGLVPAIERFCTDPENGASLAISLHTVSDEVRDQVIPINRRYPLGQLGDSLRKHFPRRPEPQPTWISAERSESHCPDSVPALGFIPVPKKRRRVNRILAVEYTLMRGVNDSPADAERLAEWLKGISCVVNLITFNPHDGTPFSRSSVATLKAFREVLLERGQLCTYRDSRGDDGMAACGQLG 1577
D+ G++ML+ L ELQ+ + ++GE+P RAE L WLY +RD+ E +G +F + +E + A+ GGL L+ V+ A DGT+K+V L GEG +ETV+IPM RYT C+S+QVGCAMNCQFCYTGR+GL+ +L TAQIVEQV+ A+R L + D A P+ +VFMGMGEP NY ++ A+ IL + G+ L SK+ VS+VGLVP I F + A LA+SLH +DEVRD ++P+NRRYP+ +L L+ +FP + +S+ D + + +EY L+R +ND+ DA RL++ LK + C+VNLI FNPH+GT F S ++K FR +L++ G++CT R S+GDD M+ACGQLG
Sbjct: 92 DNTGRLMLRNLTLQELQEWLISVGERPNRAEQLFRWLYGKNAWIRDISEAK----DNGFAFSK-----VFKEKVITSASLSGGLTLQSVRTAQDGTKKLVFALNQGEGSAMGTVETVLIPMPNKNGINSRYTACLSTQVGCAMNCQFCYTGRMGLLGNLTTAQIVEQVVEARRMLSQEASDSAGASEIPIGNIVFMGMGEPLHNYNALLAAIDILAE---GLCLSRSKIIVSSVGLVPEIRSFLDTKK--AKLAVSLHATTDEVRDWIVPVNRRYPIKELISLLQGYFP----------MSNAKQSNTSD------------------KFVVIEYVLLRHINDTAEDAVRLSDLLKDVYCMVNLIVFNPHEGTQFKGSEEESVKTFRSILVKAGKVCTVRVSKGDDTMSACGQLG 464
BLAST of mRNA_H-paniculata_contig2570.7002.1 vs. uniprot
Match: A0A0D2MV18_9CHLO (Ribosomal RNA large subunit methyltransferase N n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MV18_9CHLO) HSP 1 Score: 314 bits (805), Expect = 2.970e-97 Identity = 183/422 (43.36%), Postives = 240/422 (56.87%), Query Frame = 3
Query: 372 MLKGLLFSELQQLMTNIGEKPGRAEILCGWLYHSGRLVRDVEETSGANSGHGDSFQRHRIGWKTRENIRACATADGGLELEDVQLAADGTRKMVSILTCGEGEGKKIETVIIPMLRGPQRKPRYTVCVSSQ------------VGCAMNCQFCYTGRLGLMAHLQTAQIVEQVISAKRYLESVGDPAPVSGVVFMGMGEPFDNYERVMRAVKILTDSRAGVRLKASKVTVSTVGLVPAIERFCTDPENGASLAISLHTVSDEVRDQVIPINRRYPLGQLGDSLRKHFPRRPEPQPTWISAERSESHCPDSVPALGFIPVPKKRRRVNRILAVEYTLMRGVNDSPADAERLAEWLKGISCVVNLITFNPHDGTPFSRSSVATLKAFREVLLERGQLCTYRDSRGDDGMAACGQLGGESMHGRG 1601
MLK L ELQ+ +IGE RA L W+Y G + E+TSG +G + F E R AT DGG+ L V A DGTRK+V LT GEG+G +E V+IP++R KPR T+CVSSQ VGCAM CQFC TG+LGL A+L AQIVEQ++ A+R GDP P++ +VFMGMGEP N + V A + + G+ + +KVTVSTVGLV +E F + A LA+SLH +DEVRD ++P+NRR+ L L +L +H+PR P KRR + +EY ++ GVND+ DA+RL + L+ I +NLI FNPHDGT F RS + + AFR V++ G++CT RDSRGDD +AACGQLG + RG
Sbjct: 1 MLKSLTLPELQEWCESIGEDRRRATQLWRWMYADGNWIGAPEDTSGVQNGFSEKFC---------EKFRQLATLDGGVRLTSVARAKDGTRKLVFELTEGEGKGGSVEAVLIPVMREAGSKPRITLCVSSQGKRRWQIKEEGAVGCAMACQFCLTGKLGLAANLSAAQIVEQLVEARRLQAREGDPVPITNIVFMGMGEPLHNLDAVAAATEAMNHP-LGLHMSHNKVTVSTVGLVDKLEEF-VERCGAAQLAVSLHATTDEVRDWIVPVNRRHDLTSLLAALARHYPR----------------------------GGPLKRR-----VLIEYVMLAGVNDTLEDAQRLVDILEPIEAKINLIQFNPHDGTQFRRSPIEQVLAFRSVVIRGGRVCTIRDSRGDDELAACGQLGDVARAARG 378
BLAST of mRNA_H-paniculata_contig2570.7002.1 vs. uniprot
Match: A0A835Y310_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y310_9CHLO) HSP 1 Score: 317 bits (813), Expect = 4.650e-97 Identity = 196/478 (41.00%), Postives = 258/478 (53.97%), Query Frame = 3
Query: 339 RPLELDSWGKIMLKGLLFSELQQLMTNIGEKPGRAEILCGWLYHSGRLVRDVEETSGANSGHGDSFQRHRIGWKTRENIRACATADGGLELEDVQLAADGTRKMVSILTCG------EGEGKK-----------------------IETVIIPMLRGPQRKPRYTVCVSSQVGCAMNCQFCYTGRLGLMAHLQTAQIVEQVISAKRYLESVGDPAPVSGVVFMGMGEPFDNYERVMRAVKILTDSRAGVRLKASKVTVSTVGLVPAIERFCTDPENGASLAISLHTVSDEVRDQVIPINRRYPLGQLGDSLRKHFPRRPEPQPTWISAERSESHCPDSVPALGFIPVPKKRRRVNRILAVEYTLMRGVNDSPADAERLAEWLKGISCVVNLITFNPHDGTPFSRSSVATLKAFREVLLERGQLCTYRDSRGDDGMAACGQLGGESMHGRGTRPPVAVKWKPTV*PRRAHAER*LRGVG 1685
RP D+ G++MLK L EL++ +GE P R + L LY R +R+++E A +F + + A A+ GGL+L+ V A DGTRK+V L EGEG +ETV+IPM + RYT C+S+QVGCAMNCQFCYTGR+GL+ +L TAQIVEQV+ A+R L + G P++ +VFMGMGEP NY+ VM A++IL G+ L +K+ VSTVGLVP ++RF A LA+SLH +DEVRD ++P NRRYPL QL +LR F P R+ + + +EY L+ GVND+ DA RL E K I C+VNLI FNPH+GT F RS+ ++AFR V LE G+ CT R S+GDD MAACGQLG P +A + P + P +A A R L G G
Sbjct: 88 RPNLRDARGRLMLKNLTLPELEEWCAAVGESPRRGKQLYRSLYR--RWIRNLDEEDSAAQAFSAAF---------KAKVAASASLAGGLQLQSVATARDGTRKLVFALVAEGEEGGPEGEGPSTSDASXXXXXXXXXXXTALARGTVETVLIPMAGRADGRTRYTACLSTQVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRLLAAEGVDIPIANIVFMGMGEPLHNYDAVMAAIEILA---TGLELSRNKIIVSTVGLVPEMQRFIASKV--AKLAVSLHATTDEVRDYIVPTNRRYPLEQLLGALRAAF--------------------------------PYATRKGDDFVVIEYVLLAGVNDTREDAVRLLELTKDIYCLVNLIVFNPHEGTDFQRSAEEDVRAFRSVFLEAGRPCTLRASKGDDEMAACGQLGD---------PGLAPRLAPRLRPPQALAAR-LAGAG 507 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2570.7002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2570.7002.1 >prot_H-paniculata_contig2570.7002.1 ID=prot_H-paniculata_contig2570.7002.1|Name=mRNA_H-paniculata_contig2570.7002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=519bp MTGPGLFLKALFCLSSQSYGIAFRAKNYQPTHAGVGGRSSTRICCGALKRback to top mRNA from alignment at H-paniculata_contig2570:4200..20281- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2570.7002.1 ID=mRNA_H-paniculata_contig2570.7002.1|Name=mRNA_H-paniculata_contig2570.7002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=16082bp|location=Sequence derived from alignment at H-paniculata_contig2570:4200..20281- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2570:4200..20281- >mRNA_H-paniculata_contig2570.7002.1 ID=mRNA_H-paniculata_contig2570.7002.1|Name=mRNA_H-paniculata_contig2570.7002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3114bp|location=Sequence derived from alignment at H-paniculata_contig2570:4200..20281- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |