mRNA_H-paniculata_contig257.6999.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig257.6999.1 vs. uniprot
Match: D7G8Q0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q0_ECTSI) HSP 1 Score: 151 bits (381), Expect = 6.510e-33 Identity = 332/1371 (24.22%), Postives = 535/1371 (39.02%), Query Frame = 3
Query: 954 LASLQRQWAADAEAQVQATRKVLGEEIGESRAKHARELGKLGRGLVDANARLAEALRQAEEVRETVNADKFDLESRLADLKQTVIHEQALLQQAQETTGKTQAEKLVHSHKECEASLAQVVSELKDERQHVAEIKCHLKEARN---EEVRHRPEQSDSSHANIMRWKGKLKTSMQQSEELRRELQRLASLVPDGGHGARGFTGASEVKEQREGLAETELSKFRKDLEEADEIESDVRLLRVKAEQEAKEGAAALLELQEKAEALKLDNNRLREQVTS--LQQPATFDGEFPEKVTDEVIHAELKEELVRLI*TRRLRRNAH*NACHEC*TQSASCAPTTRNQGPRSRTSS*QERDGALXXXXXNIEQGRNASEKRSRDDTVDHT*RPPSD*RVVYQTDR*GRRERTGHH---NHRELGSGELSPTAGA*EGFAAPRRDWCT*GCTKGQCITAQG*GAEGPSCSRKEPAE*P*SGICRTEKSGGIFRASAARRTGSV*ER*FKPTGSNRVTSSDD*DNGTGNGGSQTLQC*PSSHCE------ILGRVYSQARSRNDRDKRQPA-----HRRSHGVG-AIKFTRKRVGSRFSSCRRA*ACVGSR*RSP*ERVQI*G*QDQDRSAFAARRRAGHFAPEHPARDFAKAGGHPKYNDFHSTHFRACCIPDYWRGESAIGVR*TGCYGNARCDANALY*RRGALGARAP*SNCGGNDAARRDEQ--SGCTSKGIAEYS-----RST---RYCSQPDTSHRCFVPD*R*REYRWARKIPLDITREAAACSVRSWGQK----EAGGSTTARGGNTNL*S*RSHE**A*EHTTSVNTAKRARSSIESIADPLS*G**GS*HETYCGKRRQKCTA*SRAC*RQPRGAKRKRPLW--------LLLK-----------TDAREGIHDEESQMLPGVVGSFEGKRHTYARTAKQPTRPDPEITNDVLPTPDKLQQPLRGDASDTTSQGLAEELLH----------------------------------------QLTRENSLRRESRQQE-LERKVKFCSLLEASSPT--------RDRVSDEAKHELDGEVDKLDRLVGQLRSTKDWVDSRGKRIKDLEMFLHSGGSCSESRQEDGSSTILSS----HAPSSRESG----SIIERVRVLEAMHQELD-DMSDFTADSIPANGGTHRRTRGIWNRAPESRSSGQHGKVLCSQFQRNKEKALLTPQPPFSAGNLPFFAVPAGAGFWPSQPYQYNEEPWREQSKRVPTTRFGS---HHQREKGCNRDDRFFAPRTTLHDLGVAGASEASEEEARQWLNRPETNIGPNILGSIAARERIEEISKMTVEGRQARSTVAVHVGWLHTLRQEMVLLG 4724
+A+ +RQWAA AEAQ + R + E+ R+ H+RE+ KL L+DA AR+ +A+++ EE RE +A K LES A+L++ V+ E+ LQ+A+E K QA ++ ++ LA+V+ EL+DER+HVAE++ +KEA + ++ + + ++ + KL +++++E LR+E R SL G +G + K ++ E++ ++ L EA+ S+++ + ++ ++AK+ AAAL + EKA A++ DN RL +V +Q GE + + DE T R R++ + Q ++TS E DG + E G A + +R + SD + + R E +L EL+ A + K +TA+ G E R + R+ GG R A + E + + + D ++ G Q ++C E L Q+ S+ KR +R + A K R+ V + R + ERV + +A + ++ A A D A A + + + G A L RG+ A + + A+ +E C + E++ R+T + CS + S R D K D+ EA + N + S R E V+ ++R + + + T R + C + A + R +W + L+ +AR H E SQ P VV +G P RP + D + Q+ G ASD TS+GLA+EL+ Q R + R + RQQ L + ++ E+ SPT R R +++K ELD EV KL++ V QLRS+K W+D R K++ + E L + S S QE S + +S +P S SG S + R LEAM Q+LD + SDFTA S + G NR R + + ++ KE L + F G PF A PA +GFW + + E + +P+ S H+ R +G F + ++ SE + ++WLNRP+ + +L IAARER E +K++VEG+QA+STVA+HV WL++LR+EM LLG
Sbjct: 1 MATKRRQWAASAEAQSKKARDAMTHELRAMRSNHSREIDKLECSLLDAKARMEKAMKETEEAREAAHAKKGALESTFAELERQVVKEKEKLQEAREAAKKNQALEVTQPGEDLRRELARVLLELEDERKHVAELQGQVKEANSAIRDDFNCAQQNCEGVGTKLVLLEQKLALTIRENEGLRKEAARATSLEVGGRYGEVSANESGATKPEQ-----LEIATLKRALHEAEMSLSELQRDQDQSIKDAKDAAAALANVHEKAAAVERDNQRLVAEVAKCRVQVQGATSGEA-QNLGDEN--------------TMRTRKHVE----------------ARQGQDTGTQTSLPLEHDGNTPTKQLDTE-GLRADLEAARHEAACFA----SDVHKSKELETLVRNELHAAQLAFRESQLKVAELNGN------LATADHE------KKLSAVTAEELGLENARLKRNME-------VVRSASEGGASRQVADTLVDELKE--VRVQLATMTSERDGLNDEVGEIKQQLVRCEDVRKAEREMFDSSLANHQRQSESQQATVKRLEVDMLAGQQREEALHTAAKLLRENVAASKLEVWRLQENLRET-TGEAERVASDLLCTEPETAQTSCQKGESEAELASAADLATATAEAR-EMASRLQLAEDQVDRLQASVQETMTKLVDSQGIAASLQEELDEARGSEKDTAQHLDEALSRFAKAEENLAKACDDRVSLEHALRDAKRTTVTDKQCSDLEQSLRRSQGD--------LEKAKEDLVSSKQXXXXXXXXXXXXTAEASRAMKEARHNREMASARQKE--------FVSVSEREQGLQRELLEA----------RTSLHTRERDCERLTVAAEQAKRDLANADIVWREETGGLQIALEEALATAGKKDENNARSATHKETSQRSP-VVSEAQGL---------SPPRPGFAVDGDPTLADEGPQRSASG-ASDATSKGLADELMQILENDANQRCSNGPPALSEKASRSWKKKLMEERHMLAQAKQAVRHHKERVKRRQQRILLFQTRWRQQSESLSPTKARPRHSARRRSLEDSKRELDSEVHKLNQFVQQLRSSKCWLDQREKKVSEFETLLAADSSGLASSQEQHPSRVATSGEQTSSPESSNSGGSTRSNASQFRSLEAMQQDLDNECSDFTAGS----------SIGDINRPRAMRGDRKPTRTQWHAPKQGKENTLPGSRSAFPIG-YPFSAFPASSGFWIHPSHAFLGE-FSPPPAGIPSRSRASRPKHNARHRGLGLGSGFQ----------INNCNQDSELDFQRWLNRPDLDTRDEVLSGIAARERREHFAKVSVEGKQAQSTVALHVDWLNSLREEMGLLG 1248
BLAST of mRNA_H-paniculata_contig257.6999.1 vs. uniprot
Match: A0A6H5KWN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWN5_9PHAE) HSP 1 Score: 138 bits (348), Expect = 5.280e-29 Identity = 139/462 (30.09%), Postives = 204/462 (44.16%), Query Frame = 3
Query: 3522 DAREGIHDEESQMLPGVVGSFEGKRHTYARTAKQPTRPDPEITNDVLPTPDKLQQPLRGDASDTTSQGLAEELLHQLTRENSLR------------------------------------RESRQQELERKVKFCSLL-----EASSPT--------RDRVSDEAKHELDGEVDKLDRLVGQLRSTKDWVDSRGKRIKDLEMFLHSGGSCSESRQEDGSSTILS----SHAPSSRESGSIIE----RVRVLEAMHQELD-DMSDFTADSIPANGGTHRRTRGIWNRAPESRSSGQHGKVLCSQFQRNKEKALLTPQPPFSAGNLPFFAVPAGAGFWPSQPYQYNEEPWREQSKRVPTTRFGS---HHQREKGCNRDDRFFAPRTTLHDLGVAGASEASEEEARQWLNRPETNIGPNILGSIAARERIEEISKMTVEGRQARSTVAVHVGWLHTLRQEMVLLG 4724
+AR H E SQ P VV +G P RP+ + D Q+ G SD TS+GLA+EL+ L + + R + R + ++++ C E+ SPT R R +++K ELD EV KL++ V QLRS+K W+D R K++ + E L + S S QE S + + + +P S SG + R LEAM QELD D SDFTA S + G +NR R + + ++ KE L + F G PF A PA +GFW + + E + +P+ S H R +G F V ++ SE + ++WLNRP+ + + IAARER E +K++++G+QA+STVA+HV WL+TLR+EM LLG
Sbjct: 862 NARSATHKETSQRSP-VVSEAQGL---------SPPRPEVAVDGDPALADAGPQRSASG-VSDATSRGLADELMQSLESDANQRCNNGPPALSEKASRSWKKKLMEEKHMLAKAKEAVRHHKERVKRRQQRILLCQTRWRQQSESLSPTKARPHHSARRRSLEDSKRELDSEVHKLNKFVQQLRSSKCWLDQREKKVSEFETILAADSSGLGSSQEQYPSRLATPGEQTSSPESSYSGGSTRSNALQFRSLEAMQQELDNDFSDFTAGS----------SIGDFNRPRTMRGDRKPTRAQRHAPKQGKENTLPGSRSAFPIG-YPFSAFPAASGFWIHPSHAFLGE-FSSPQAGIPSRSRASRPEHSARHRGRGLGSGFQ----------VNNCNQDSELDFQRWLNRPDLDTRDEVRSGIAARERREHFAKLSMDGKQAQSTVALHVDWLNTLRKEMGLLG 1290
BLAST of mRNA_H-paniculata_contig257.6999.1 vs. uniprot
Match: A0A7S1XUY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUY8_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 6.210e-7 Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 3
Query: 123 KTRKHSKLYYRQFRGYLTTSGESTWDHPCDEYYRKLYEEEKKKRMTVDKAKKDKSKQ 293
KTR ++YY F ++G+STWDHPCDEYYR LYEE K+K++ +KA D +KQ
Sbjct: 126 KTRDTEEIYYFNF-----SNGQSTWDHPCDEYYRSLYEEHKRKKVEEEKAAHDTAKQ 177
BLAST of mRNA_H-paniculata_contig257.6999.1 vs. uniprot
Match: A0A0W8BXL9_PHYNI (Centrosomal protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8BXL9_PHYNI) HSP 1 Score: 58.9 bits (141), Expect = 8.560e-6 Identity = 29/56 (51.79%), Postives = 36/56 (64.29%), Query Frame = 3
Query: 123 KTRKHSKLYYRQFRGYLTTSGESTWDHPCDEYYRKLYEEEKKKRMTVDKAKKDKSK 290
KT ++YY F +G+STWDHPCDE+YR LYEE KKKR T D + D+ K
Sbjct: 66 KTTDTEEIYYFNF-----ATGQSTWDHPCDEFYRNLYEEHKKKRHTKDAQETDEKK 116
BLAST of mRNA_H-paniculata_contig257.6999.1 vs. uniprot
Match: A0A6A3ZDA5_9STRA (WW domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZDA5_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.840e-5 Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 3
Query: 123 KTRKHSKLYYRQFRGYLTTSGESTWDHPCDEYYRKLYEEEKKKRMTVDKAKKDKSKQQV 299
KT ++YY F SG+STWDHPCDE+YR LYEE KKKR T D + D+ K++V
Sbjct: 62 KTTDTEEIYYFNF-----ASGQSTWDHPCDEFYRNLYEEHKKKRQTNDVQETDEKKKKV 115
BLAST of mRNA_H-paniculata_contig257.6999.1 vs. uniprot
Match: A0A7S3LYJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYJ5_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 5.100e-5 Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 3
Query: 123 KTRKHSKLYYRQFRGYLTTSGESTWDHPCDEYYRKLYEEEKKKRMTVDKAKKDKSK 290
KT+ +YY F T+G+STWDHPCD YY++LYEEEKKK+ TV K D+++
Sbjct: 38 KTKDTEDIYYFNF-----TTGDSTWDHPCDGYYKRLYEEEKKKKETVIKESGDQNR 88 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig257.6999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig257.6999.1 >prot_H-paniculata_contig257.6999.1 ID=prot_H-paniculata_contig257.6999.1|Name=mRNA_H-paniculata_contig257.6999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=489bp MRATSAEHKVQAALRQQETKDLEAELQVSKSETARYSSELETSSKGETLLback to top mRNA from alignment at H-paniculata_contig257:1495..16351- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig257.6999.1 ID=mRNA_H-paniculata_contig257.6999.1|Name=mRNA_H-paniculata_contig257.6999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14857bp|location=Sequence derived from alignment at H-paniculata_contig257:1495..16351- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig257:1495..16351- >mRNA_H-paniculata_contig257.6999.1 ID=mRNA_H-paniculata_contig257.6999.1|Name=mRNA_H-paniculata_contig257.6999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2934bp|location=Sequence derived from alignment at H-paniculata_contig257:1495..16351- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |