prot_H-paniculata_contig2564.6984.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2564.6984.1 vs. uniprot
Match: A0A6H5LCE2_9PHAE (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCE2_9PHAE) HSP 1 Score: 194 bits (492), Expect = 1.370e-53 Identity = 181/362 (50.00%), Postives = 200/362 (55.25%), Query Frame = 0
Query: 3 VTRQSIFELANALRDTAVPSNLPSQLRQRGMGGQNRGDVSSAHARFQDDFHNRGRAVEKANAERGGGGRSSSSKPVQLLYTKNWRGQEVVVEIEQSDEDEXXXXXXXXFDAXXXXXXXXXXXXXXXXANXXXXXXXXXXXXXMSGLLPSRASIKKKAAAVALKERQAAKRAKKALPGFLKGSRISGTDGNASSEVEDLSDDDADGVNGDSSLAVGGEGAGGSGAHARRLGAAAVNSVEELDEFKKRLLRETERMKQVWRRQQIERRVEAGLRKWWEVEDDDT----------------------AVEAGQNGCSTGGSRGGGGVAASGVLVEFRGRRVPIEALTPEDAAEMSPAEYIKFYNL 342
V R+SIFEL ++LRDT VPSNLPSQLRQRGMGGQ RGDVSSAHARFQDDFH+RGRA +KA AERG G +SS+PVQ+LYTKNWRG+EVVVEIEQS XXXXXXXXXXXA XXXXXXXXXXXX LLPSRA++K+KAA RAKKALP FLKGS ISG N + ARRLG AAV SV E DE KKRL TERMKQVWRRQQ A +A + G S G G V V F VPIEALT ED A+MS +Y +FYN+
Sbjct: 206 VPRESIFELVHSLRDTVVPSNLPSQLRQRGMGGQQRGDVSSAHARFQDDFHHRGRAADKAAAERGAAGGRASSRPVQVLYTKNWRGEEVVVEIEQS--------------------XXXXXXXXXXXAEGXXXXXXXXXXXXXGLLLPSRAALKRKAADAXXXXXXXXXRAKKALPTFLKGSAISGNYNNTADXXXXXXXXXXXXXXXXXXXXXX--------XXARRLGVAAVTSVAERDEMKKRLRPWTERMKQVWRRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGAPQARTSARLLGLSAGVGAGQRFRVGVRF----VPIEALTEEDIAKMSAEDYTRFYNV 535
BLAST of mRNA_H-paniculata_contig2564.6984.1 vs. uniprot
Match: D8LCF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF2_ECTSI) HSP 1 Score: 151 bits (381), Expect = 3.320e-39 Identity = 76/98 (77.55%), Postives = 87/98 (88.78%), Query Frame = 0
Query: 3 VTRQSIFELANALRDTAVPSNLPSQLRQRGMGGQNRGDVSSAHARFQDDFHNRGRAVEKANAERGGGGRSSSSKPVQLLYTKNWRGQEVVVEIEQSDE 100
V R+SIFEL ++LRD VPSNLPSQLRQRGMGGQ RGDVSSAHARFQDDFH+RGRA +KA AERG G +SS+PVQ+LYTKNWRG+EVVVEIEQS++
Sbjct: 4 VPRESIFELVHSLRDIVVPSNLPSQLRQRGMGGQQRGDVSSAHARFQDDFHHRGRAADKAAAERGAAGGRASSRPVQVLYTKNWRGEEVVVEIEQSED 101
BLAST of mRNA_H-paniculata_contig2564.6984.1 vs. uniprot
Match: A0A836CC40_9STRA (TFIIE alpha subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC40_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.920e-6 Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 0
Query: 15 LRDTAVPSNLPSQLRQRGMGGQNRGDVSSAH-ARFQDDFHNRGRAVEKANAERGGGGRSSSSKPVQLLYTKNWRGQEVVVEIEQSDED 101
L D VPSNLPS+LR RG+GG RG ++ ARF+DD + A +GG G S++ V LLY +N G EVVVEIE SD D
Sbjct: 281 LHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDDRFSLHAGY--AAGTKGGDGAHGSNRAVDLLYARNAAGYEVVVEIE-SDSD 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2564.6984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig2564.6984.1 ID=prot_H-paniculata_contig2564.6984.1|Name=mRNA_H-paniculata_contig2564.6984.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=347bpback to top |