prot_H-paniculata_contig25611.6975.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE) HSP 1 Score: 186 bits (471), Expect = 4.090e-50 Identity = 82/161 (50.93%), Postives = 117/161 (72.67%), Query Frame = 0
Query: 1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTGT 161
++G+ +PIV++YTYLG+ F LDV MG++ KLV + P+L C I +P+K AV++GV++PRLLFGAE++GM+ IT+++Q ++N+ R+ GM PK+TVSSVALWR++ +PPICA AAAR AR +QK S LKTWI + ++HR W W TGT
Sbjct: 813 LAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGT 973
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A2R5FKX6_9STRA (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FKX6_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.160e-29 Identity = 62/163 (38.04%), Postives = 95/163 (58.28%), Query Frame = 0
Query: 1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSM-LKTWINVMEGVEFRHRSWAWMTGTR 162
+ G +PIV++YTYLG+ R DL ++ DR KAR+L S++ FLR + + + + AV + V+IP + +GAEI+ + T Q F+N L+L G+ VS+VALW + G+PP+CA A + AR L K L+TW+ M ++ R W+T R
Sbjct: 192 LQGAAVPIVESYTYLGLEIRPDLSRQGTIADRLAKARRLAGSMHSFLRRQDVPIQFRTAVARTVLIPAITYGAEIFAFNKSFTRGAQQFINTQLKLIAGVARGQAVSNVALWHEFGVPPLCATANGQRARLLSKGGRELRTWLAKMVERGYKARRTTWITNAR 354
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A1J5WJX7_9MICR (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WJX7_9MICR) HSP 1 Score: 117 bits (294), Expect = 1.850e-26 Identity = 85/253 (33.60%), Postives = 126/253 (49.80%), Query Frame = 0
Query: 1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWI-NVMEGVEFRHRSWAWMTG--TRNRGITNLVWQREEGLRMTASRTRYREAGYGK-----RRLTALRATTSPTLAAGLTFIVKCRVGGFWSAESLAKRKMAPERYLRECPCC 245
+ G + ++YTYLG+ L + K R K +A L LR + + KA +I+G+VIP + +GAE YG IT ++Q N L++ G + S A+ RD+G+PPI A A RAL+K LKT + ++ + + W T T+N+ + VW+ EG S RY+E + K R+LTAL PTL G +++ R G W+ E A+R +A E L ECPCC
Sbjct: 709 VQGKDVVAGESYTYLGIMLDETLSLKKMALGRKKKGVGALALLEKSLRGTVLPIEYKALLIRGLVIPAMSYGAEAYGSTAAITWELQKVANIALKIISG----NECSLTAVRRDLGIPPIQATAVGAQNRALKKFPTLKTEVARILNNGKTDVKCWLGRTREETKNKRTKDGVWRFLEGKEKAKSWKRYKENNFEKTSKLFRQLTAL----EPTLQKGWKAVLQIRTGHLWTCERAARRGVADEWLLTECPCC 953
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A1J5WU32_9MICR (Reverse transcriptase domain-containing protein n=2 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WU32_9MICR) HSP 1 Score: 116 bits (290), Expect = 4.550e-26 Identity = 81/249 (32.53%), Postives = 123/249 (49.40%), Query Frame = 0
Query: 3 GDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTGTRNRGIT-----NLVWQREEGLRMTASRTRYREAG-YGKRRLTALRATTSPTLAAGLTFIVKCRVGGFWSAESLAKRKMAPERYLRECPCC 245
G IP D+YTYLG+ +L R K + + L LR ++S+ K ++KG+++P +L+GAE+YG K T Q +N+ LR+ G G T A+WRD+G+ P+ A AA+R RA K L+T + + +H + W +G NR + N W+ EG T + RY+E G Y R A+T P + G +++ R GG W+ A+ +A E L CP C
Sbjct: 264 GGTIPEPDSYTYLGVELDRNLSRKTMSERRRKKGLECLFMLEKNLRSPSLSIGHKTLLVKGILMPTMLYGAEVYGSIGKTTSGAQVVVNKALRMVAGNGGALT----AVWRDLGVIPVQAAAASRQRRAWLKFPTLRT-VGSRVATKDKHLPYGW-SGRTNREVKRRPDKNSTWEMLEGKDGTGAWKRYQELGLYHSREQFRWLASTRPDVRRGWKKVLQLRTGGLWAGLFAARIGIAKEELLVRCPSC 506
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A7S3PFX4_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PFX4_9STRA) HSP 1 Score: 111 bits (277), Expect = 5.510e-25 Identity = 51/127 (40.16%), Postives = 80/127 (62.99%), Query Frame = 0
Query: 35 KARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTGT 161
K R+ A++ PFL C I + I+ ++ V++ RLL+GAEIYGM + +T Q L+++L++ +G+ PK VS + LW + G+PPI A+AA+R AR QK L+T I + +R W W++GT
Sbjct: 8 KGRQTQAAIRPFLGCLDIPLCIRRQILCSVMLSRLLYGAEIYGMNKSLTRHFQQLLDESLKIMLGVSPKMPVSKLVLWEEFGIPPIAALAASRRARVFQKAQNLRTKITTLIQSPYRSLQWTWISGT 134
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM) HSP 1 Score: 100 bits (250), Expect = 1.350e-20 Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 0
Query: 1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQG-FLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTG 160
+ G P+P+V+ Y YLG LD+ +S+ R +A+K + S+ PFL C +I + I++ V +V P L+GAE++G++ T I F N R+A T + L R++ +PP+ A+AAAR RA K LKTW++ + R R W+TG
Sbjct: 1009 LQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIA------GTYTGT-LARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTG 1162
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A1J5WUS4_9MICR (Reverse transcriptase domain-containing protein n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WUS4_9MICR) HSP 1 Score: 99.8 bits (247), Expect = 3.200e-20 Identity = 81/254 (31.89%), Postives = 123/254 (48.43%), Query Frame = 0
Query: 1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKT-WINVME-GVEFRHRSWAWMTGTRNRGITN-----LVWQREEGLRMTASRTRYREAGYGK--RRLTALRATTSPTLAAGLTFIVKCRVGGFWSAESLAKRKMAPERYLRECPCC 245
I PIP V +YTYLG+ +L + R K + V L LR ++++ K ++KG+VIP +L+GAE+YG + T +Q +N+ L++ G + + A+ RD+G+ PI A AA R RA K L+T +V + G W TG R + W+ E TAS RY+ G G+ ++ L A+T L G +++ R G ++ + AKR A E LR CP C
Sbjct: 692 IGEGPIPEVKSYTYLGVELDQNLTRKAVVEKRRKKGEECVFMLEKQLRSPSLTIGHKTLLVKGIVIPTMLYGAEVYGSTGEATRGMQTVVNKALKMVAG----NCCALTAVRRDLGMMPIQAAAAGRQERAWAKFPNLRTIGASVFDRGGTTTTNGW---TGRTKRELKTRPGRCATWEMMERKDGTASWKRYKRLGLGESSKKFRWL-ASTRANLHIGWKRVLQLRTGNLYTGHTAAKRGAAEETLLRMCPSC 937
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A1J5WVJ6_9MICR (Reverse transcriptase domain-containing protein n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WVJ6_9MICR) HSP 1 Score: 78.2 bits (191), Expect = 5.530e-13 Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 0
Query: 3 GDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTGTRNRGI 166
G IP D+YTYLG+ +L R K + + L LR ++S+ K ++KG+++P +L+GAE+YG K T Q +N+ +R+ G G T A+ RD+G+ P+ A AA+R RA K ++T + + +H + W +G NR +
Sbjct: 264 GGTIPEPDSYTYLGVELDRNLSRKTMSERRRKKGLECLFMLEKNLRSPSLSIGHKTLLVKGILMPTVLYGAEVYGSIGKTTSGAQVVVNKAVRMIAGNGGALT----AVRRDLGVIPVQAAAASRQRRAWLKFPTVRT-VGSRVATKDKHLPYGW-SGRTNREV 421
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A507CUH4_9FUNG (Reverse transcriptase domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CUH4_9FUNG) HSP 1 Score: 77.0 bits (188), Expect = 1.870e-12 Identity = 66/234 (28.21%), Postives = 112/234 (47.86%), Query Frame = 0
Query: 1 ISGDPIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKIT-DQIQGFLNQTLRLAMGMGPKSTVSSVALWR-DMGLPPICAMAAARHARALQKCSMLKTWINVMEGVEFRHRSWAWMTGT-RN----RGITNLV---WQREEGLRMTASRTRYREAGYGKRRLTALRATTSPTLAAGLTFIVKCRVGGFWS 224
+ G+P+P+V+TY YLG+ + + + R K +K L FLR E+I + I+ A + VIP L++ +E++G K+ +++ ++ G+ S ++S+ R ++GL + A ARA K LKTWI + SW + T RN GIT+ +R+ L+ T S +Y AG+ K R + +G ++KCRVG ++
Sbjct: 548 MQGNPVPVVNTYQYLGIPVNTEWKLKDVIEQRAEKGKKAYWGLAHFLRSESIPLEIRIATCRASVIPVLMYASELWGTAAKVEIEELDRVHAMGVKSLAGLRLSSNLTSLECLRTELGLRSVTEKARLAVARAEVKYPTLKTWIAKLALARRTKNSWFSRSKTIRNTAEQEGITDTSANKMKRKLALK-TLSMQKYSGAGFEKTREYIQILSRGLGYPSGTQALLKCRVGAVFT 780
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Match: A0A1J5X0W1_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5X0W1_9MICR) HSP 1 Score: 72.4 bits (176), Expect = 5.350e-12 Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 0
Query: 5 PIPIVDTYTYLGMSFRADLDVSKSMGDRFVKARKLVASLYPFLRCETISMPIKAAVIKGVVIPRLLFGAEIYGMKRKITDQIQGFLNQTLRLAMGMGPKSTVSSVALWRDMGLPPICAMAAARHARALQKCSMLKT 140
PIP +++YTYLG+ L R K + + L LR ++ + K +I+G+V+P + +GAEI+G +T QG +N +++ G T A+ RD+G+ P+ A+AA R RA K LKT
Sbjct: 47 PIPDLESYTYLGVEITKTLSRMAMAERRRKKGLECLFMLEKKLRSPSLPIGHKTLLIRGIVMPTVTYGAEIFGSTGVVTKGSQGVINLAMKMVAGRNCALT----AVRRDLGILPVQAIAAERQKRAWGKFPYLKT 178 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25611.6975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig25611.6975.1 ID=prot_H-paniculata_contig25611.6975.1|Name=mRNA_H-paniculata_contig25611.6975.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bpback to top |