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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 627 |
| Cds size | 375 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2561.6974.1 >prot_H-paniculata_contig2561.6974.1 ID=prot_H-paniculata_contig2561.6974.1|Name=mRNA_H-paniculata_contig2561.6974.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MVLTHPSTSSAHAEVDLASGSVTLRDVGSEAGTFYGSGNMEDLRRLERDE
RVRIEGGDLLRFGLNDFQRRATKTPRLRSWTMPERYHHKGAQVRTVMPMK
LREKPVHNHLAIRIMAKAESSDSW* back to topmRNA from alignment at H-paniculata_contig2561:17622..20010- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2561.6974.1 ID=mRNA_H-paniculata_contig2561.6974.1|Name=mRNA_H-paniculata_contig2561.6974.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2389bp|location=Sequence derived from alignment at H-paniculata_contig2561:17622..20010- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTCTTGCCAATACCAGTGACCCTGTTTCAACGATAGGACGCGACGCAGG
ATCCACGATGGTATGTATGATTGACCTTCCTTGTGAGACGCCAAGTAGGA
ATGCAAAACTTACCCCGTGCCCCTATAGCTTCCCCGACTACAGATGGAAC
CACGTTAGTAGCCCACTGTGGTAGAGCAAAATCTCGTCTGACACAACTAT
CACCACGTTGTGTTTGCCCCCTGATTCTGCGAAACAGAAAACAGGCAAAC
AACTGTGTACAGACAGACTTCAGTATACTTCATGTACCATGTCGATCTTT
TTCTCCCCGGGTTGCACCAAGACGACTGCGGCTACTCCACAGACAAATAA
GCCTCCCCTTCGCATCGGCCACCAGGAATAATTGAACCAGTGCACGTACT
CGCTTTATAACACCGATGCAGCAGTACAAAGTCCTGATTGTGCTTCCTTA
CAATTAATTGTTGTACCTCCACTCACTGTTGGATTCAGGTACTGACTCAC
CCGTCCACATCTTCTGCACACGCCGAGGTCGACCTTGCGTCAGGGTCGGT
GAGCATCGTATTCAGTGTAACATCTACTGTATGAATCGTACACCTGATGT
AGAAGACTGTACTGTGAAAGCTGATCTCTGCAGTCCACGAGATCGCTCTT
CAAGGATCCATCGCCAATTCAGCAAGTTTATGCAGTTGAACTTGAACTTA
TTTACACCATGTCGTGCAGCCTCTCCTGGGGGTTTGCAGTTCGATGTTAC
ATACGAAGTGTCTTTTGTCATGGTTCGACTCTGGTACCACAGTAGCAGGC
TTCACATGCCCTGATAGTTAGGCAGGGGTTTGGTTGAGGCTACTTTACCA
TTTCGTCGAGTGAGATGGTTGGTAGCCCTTTGTTTCATGGTTCACGCTTT
GTTGTGCACCGACGCGAGCAGAGCCAAGGCCGGAACTACCGCTACCCTTA
ACCCTGACCCCCAACCCCTCGTAGGCCTAATGTGTATTGGCAGAGCTCAA
ATCGGCGCCGTTGGCACCGTGTGAGAACACAACAGATTTTCGGCACCCAT
TGTGAGCGCTCCAGGGCGTGACGTCGACGTGGTGTCATGTGCCATTGTGG
TATGCGAGTTTGTATACCCCACCTATCGCATTCGATAATGTGGTAAACTC
CACTCGTTTGGTTGTGATTTTCACTAATCATTTGAGCGCAACGGATTTTC
GGCTCCCTCCTGCGGGAATAATAATCGTGTATATTAAGCACGTTGTAGAG
CCATTCAACCATGGGTATAAATTACAAATGGGCCCACTCGCGATCAAATG
GTTGAACGATAAATATGGTCAGGTTACGCTCCGCGACGTCGGCTCTGAGG
CCGGCACTTTCTACGGAAGTGGCAATATGGAAGATCTGCGTCGACTAGAG
AGAGATGAGCGCGTACGCATAGAGGGTGGAGACTTGCTCAGATTTGGTGA
GGATAGCTCGGAACTGTACAGGTGGGGAATTTTTTTAGCTTGATTGCAAT
CCCAAGTATTTTAAAAATAGCAGGAAGACCACTGTAATTGGGATAATTGT
TTTCTCTGACAATGTAGTTGTCTAACATCATTTAGTCAACCTTTAAATAA
AATATCAAATTTGTACTCTGTGCGGGGCTGATACCTGAGTATCCAGGACT
ACACCCATATGTACATTTTTTTAATCTATTGTATTCTTGTATTTTGTCGC
GCTGGTAAAGGTTTGAACGACTTCCAAAGGAGAGCGACAAAGACACCACG
ATTGCGCAGCTGGACCATGCCGGAGAGGTATCACCACAAGGGAGCGCAAG
TCAGGACGGTGAATACTTCGCAGTGTCTATGGACGGTAGTCAGTGCCACA
CACTTGCCCCATCTATTGACGCATTGGAGAATGTGCAACAGAAAGCAACC
TGGATCGCCTTTGAACCACGTGGGACTACGGCCTTTCAAATCAGACCGAA
ACATTGGATGGAAAAACACCTACTCGTTTAGCTGTTGTCGAGGAAATGTG
CAGTGATTTTGACTTCGTTCGAGGATGGGTTTTGCGACCTGGTGGATACT
CTTTGGTGATGCTATCCGCCTTTTCCCGAATTTCTCGTGCACGCATCGCG
ATAGGTGATGCCGATGAAGCTCCGCGAGAAACCTGTACACAACCATCTGG
CGATAAGAATTATGGCGAAGGCAGAATCATCGGATTCGTGGTAACCATCT
CACGTGCGGAAAATCTGCCGGAGCCACCAACAAAAAATGTGTTTGGTAAA
CCGAAGAAGACCAATGCGACAGATCATCCTTATTTCCATGTCAAGGTTTC
TCGGACTGGAGGGCAAGAAACTGTCAAGTCTACGGTTACCACGTCTGTAC
CTGGAGATGGGTCTGGGTGCACCTGGGGGCCAGAGGGCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig2561:17622..20010- >mRNA_H-paniculata_contig2561.6974.1 ID=mRNA_H-paniculata_contig2561.6974.1|Name=mRNA_H-paniculata_contig2561.6974.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=750bp|location=Sequence derived from alignment at H-paniculata_contig2561:17622..20010- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGGTACTGACTCACCCGTCCACATCTTCTGCACACGCCGAGGTCGA
CCTTGCGTCAGGGTCGGTACTGACTCACCCGTCCACATCTTCTGCACACG
CCGAGGTCGACCTTGCGTCAGGGTCGGTTACGCTCCGCGACGTCGGCTCT
GAGGCCGGCACTTTCTACGGAAGTGGCAATATGGAAGATCTGCGTCGACT
AGAGAGAGATGAGCGCGTACGCATAGAGGGTGGAGACTTGCTCAGATTTG
GTTACGCTCCGCGACGTCGGCTCTGAGGCCGGCACTTTCTACGGAAGTGG
CAATATGGAAGATCTGCGTCGACTAGAGAGAGATGAGCGCGTACGCATAG
AGGGTGGAGACTTGCTCAGATTTGGTTTGAACGACTTCCAAAGGAGAGCG
ACAAAGACACCACGATTGCGCAGCTGGACCATGCCGGAGAGGTATCACCA
CAAGGGAGCGCAAGTCAGGACGGTTTGAACGACTTCCAAAGGAGAGCGAC
AAAGACACCACGATTGCGCAGCTGGACCATGCCGGAGAGGTATCACCACA
AGGGAGCGCAAGTCAGGACGGTGATGCCGATGAAGCTCCGCGAGAAACCT
GTACACAACCATCTGGCGATAAGAATTATGGCGAAGGCAGAATCATCGGA
TTCGTGGTAAGTGATGCCGATGAAGCTCCGCGAGAAACCTGTACACAACC
ATCTGGCGATAAGAATTATGGCGAAGGCAGAATCATCGGATTCGTGGTAA back to top
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