prot_H-paniculata_contig256.6967.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig256.6967.1
Unique Name	prot_H-paniculata_contig256.6967.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	173

Homology

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BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot
Match: D7FRN0_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRN0_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 8.380e-39
Identity = 57/75 (76.00%), Postives = 67/75 (89.33%), Query Frame = 0

Query:   32 GWYARPAANADGSNLMMKWECGITGPANTNWEGGLYKIMMEFSDDYPSKPPKCRFVPPLFHPNVYPSGTICLSLL 106
            GW+ R +AN DGS+ +MKWECG+ GP NTNWEGG Y+I MEF++DYPSKPPKC+FVPPLFHPNVYPSGTICLS+L
Sbjct:   25 GWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSIL 99

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BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot
Match: A0A7S1BQ03_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQ03_9STRA)

HSP 1 Score: 133 bits (335), Expect = 6.050e-37
Identity = 56/75 (74.67%), Postives = 66/75 (88.00%), Query Frame = 0

Query:   32 GWYARPAANADGSNLMMKWECGITGPANTNWEGGLYKIMMEFSDDYPSKPPKCRFVPPLFHPNVYPSGTICLSLL 106
            G+YARP A+ DGS+ MMKWE GI G A ++WEGGLYK+ MEFS++YPSKPPKC+F PPLFHPNVYPSGTICLS+L
Sbjct:   30 GFYARPVASGDGSSNMMKWEVGIPGKAGSDWEGGLYKVSMEFSEEYPSKPPKCKFTPPLFHPNVYPSGTICLSIL 104

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BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot
Match: A0A7S1FY89_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY89_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.270e-36
Identity = 56/75 (74.67%), Postives = 66/75 (88.00%), Query Frame = 0

Query:   32 GWYARPAANADGSNLMMKWECGITGPANTNWEGGLYKIMMEFSDDYPSKPPKCRFVPPLFHPNVYPSGTICLSLL 106
            G+YARP A+ DGS+ MMKWE GI G A ++WEGGLYK+ MEFS++YPSKPPKC+F PPLFHPNVYPSGTICLS+L
Sbjct:   30 GFYARPVASGDGSSNMMKWEVGIPGKAGSDWEGGLYKVSMEFSEEYPSKPPKCKFTPPLFHPNVYPSGTICLSIL 104

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BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot
Match: F0YIG1_AURAN (UBC core domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIG1_AURAN)

HSP 1 Score: 131 bits (330), Expect = 5.080e-36
Identity = 55/75 (73.33%), Postives = 64/75 (85.33%), Query Frame = 0

Query:   32 GWYARPAANADGSNLMMKWECGITGPANTNWEGGLYKIMMEFSDDYPSKPPKCRFVPPLFHPNVYPSGTICLSLL 106
            G+YARP +N D S  +M+WE GI G A T+WE GLYK+ MEF+DDYPSKPPKC+FVPPLFHPNVYPSGTICLS+L
Sbjct:   18 GFYARPGSNPDNSTNLMRWETGIPGKAGTDWEAGLYKVTMEFTDDYPSKPPKCKFVPPLFHPNVYPSGTICLSIL 92

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BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot
Match: A0A7S2Y0C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0C7_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.740e-36
Identity = 53/75 (70.67%), Postives = 65/75 (86.67%), Query Frame = 0

Query:   32 GWYARPAANADGSNLMMKWECGITGPANTNWEGGLYKIMMEFSDDYPSKPPKCRFVPPLFHPNVYPSGTICLSLL 106
            G+YARP  + D S  +MKWECG+ GP  T+WEGG+YK+ MEFS++YPSKPPKC+FVPPLFHPNVYPSGT+CLS+L
Sbjct:   33 GFYARPMMSDDNSTNLMKWECGMPGPEGTDWEGGMYKLTMEFSEEYPSKPPKCKFVPPLFHPNVYPSGTVCLSIL 107

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BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot
Match: A0A7S1UFU8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFU8_9STRA)

HSP 1 Score: 132 bits (333), Expect = 7.310e-36
Identity = 53/75 (70.67%), Postives = 66/75 (88.00%), Query Frame = 0

Query:   32 GWYARPAANADGSNLMMKWECGITGPANTNWEGGLYKIMMEFSDDYPSKPPKCRFVPPLFHPNVYPSGTICLSLL 106
            G++ARP  + DG+N +MKW+CGI GP NTNWEGGLY + MEF++DYPS+PPK RFVPPLFHPN+YPSGT+CLS+L
Sbjct:   66 GFHARPEQSEDGTNNLMKWKCGIPGPENTNWEGGLYTVTMEFTEDYPSRPPKVRFVPPLFHPNIYPSGTVCLSIL 140

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BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot
Match: B8BY49_THAPS (Ubiquitin conjugating enzyme n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8BY49_THAPS)

HSP 1 Score: 130 bits (328), Expect = 1.250e-35
Identity = 54/75 (72.00%), Postives = 65/75 (86.67%), Query Frame = 0

Query:   32 GWYARPAANADGSNLMMKWECGITGPANTNWEGGLYKIMMEFSDDYPSKPPKCRFVPPLFHPNVYPSGTICLSLL 106
            G+YARP +  DGS+ +MKWE GI G   T+WE G+YK+M+EFSD+YPSKPPKC+FVPPLFHPNVYPSGTICLS+L
Sbjct:   25 GFYARPVSRGDGSSDLMKWETGIPGKEGTDWESGVYKVMLEFSDEYPSKPPKCKFVPPLFHPNVYPSGTICLSIL 99

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BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot
Match: A0A835YNI1_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI1_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.550e-35
Identity = 52/75 (69.33%), Postives = 66/75 (88.00%), Query Frame = 0

Query:   32 GWYARPAANADGSNLMMKWECGITGPANTNWEGGLYKIMMEFSDDYPSKPPKCRFVPPLFHPNVYPSGTICLSLL 106
            G+YARP +N D S  +MKW+CGI G A+++W GG+YK+ MEF+D+YPSKPPKC+FVPPLFHPNVYPSGT+CLS+L
Sbjct:   24 GFYARPVSNPDNSMNLMKWDCGIPGVASSDWAGGVYKLSMEFTDEYPSKPPKCKFVPPLFHPNVYPSGTVCLSIL 98

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BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot
Match: A0A0F7SRW8_PHARH (Ubiquitin-conjugating enzyme 9 n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SRW8_PHARH)

HSP 1 Score: 128 bits (322), Expect = 9.240e-35
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 0

Query:   32 GWYARPAANADGSNLMMKWECGITGPANTNWEGGLYKIMMEFSDDYPSKPPKCRFVPPLFHPNVYPSGTICLSLL 106
            G+YARPA N DG+  +MKWE GI G A TNWEGG++K+ M F +DYPSKPPKC+F PPLFHPNVYPSGT+CLS+L
Sbjct:   23 GFYARPAKNTDGTMDLMKWEVGIPGKAGTNWEGGIFKLQMIFPEDYPSKPPKCKFTPPLFHPNVYPSGTVCLSIL 97

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BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot
Match: A0A448ZL65_9STRA (UBC core domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A448ZL65_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.310e-34
Identity = 53/75 (70.67%), Postives = 64/75 (85.33%), Query Frame = 0

Query:   32 GWYARPAANADGSNLMMKWECGITGPANTNWEGGLYKIMMEFSDDYPSKPPKCRFVPPLFHPNVYPSGTICLSLL 106
            G+YARP +  DGS+ +MKWE GI G   T+WE G++K+ MEFS+DYPSKPPKC+FVPPLFHPNVYPSGTICLS+L
Sbjct:   24 GFYARPTSKGDGSSDIMKWEAGIPGKEGTDWENGVFKVSMEFSEDYPSKPPKCKFVPPLFHPNVYPSGTICLSIL 98

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig256.6967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FRN0_ECTSI	8.380e-39	76.00	UBC core domain-containing protein n=2 Tax=Ectocar...	[more]
A0A7S1BQ03_9STRA	6.050e-37	74.67	Hypothetical protein (Fragment) n=1 Tax=Corethron ...	[more]
A0A7S1FY89_9STRA	1.270e-36	74.67	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
F0YIG1_AURAN	5.080e-36	73.33	UBC core domain-containing protein (Fragment) n=1 ...	[more]
A0A7S2Y0C7_9STRA	5.740e-36	70.67	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S1UFU8_9STRA	7.310e-36	70.67	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
B8BY49_THAPS	1.250e-35	72.00	Ubiquitin conjugating enzyme n=2 Tax=Thalassiosira...	[more]
A0A835YNI1_9STRA	3.550e-35	69.33	Ubiquitin conjugating enzyme n=1 Tax=Tribonema min...	[more]
A0A0F7SRW8_PHARH	9.240e-35	70.67	Ubiquitin-conjugating enzyme 9 n=1 Tax=Phaffia rho...	[more]
A0A448ZL65_9STRA	1.310e-34	70.67	UBC core domain-containing protein n=2 Tax=Bacilla...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 16..167 e-value: 4.3E-16 score: 69.5
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 28..107
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..94
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 95..112
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 113..123
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 124..144
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 145..172
None	No IPR available	TMHMM	TMhelix		coord: 131..153
None	No IPR available	TMHMM	TMhelix		coord: 89..111
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 34..118 e-value: 4.7E-25 score: 87.9
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 27..118 score: 22.856
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 21..135 e-value: 2.5E-32 score: 113.8
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 26..111
IPR027230	SUMO-conjugating enzyme Ubc9	PANTHER	PTHR24067:SF248	DORSAL INTERACTING PROTEIN 4	coord: 28..107
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 91..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig256	contig	H-paniculata_contig256:30390..33078 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig256.6967.1	mRNA_H-paniculata_contig256.6967.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig256 30259..34561 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig256.6967.1 ID=prot_H-paniculata_contig256.6967.1|Name=mRNA_H-paniculata_contig256.6967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MSLCHALYLLRPRLDAYSIIDLTVDYQQTTQGWYARPAANADGSNLMMKW
ECGITGPANTNWEGGLYKIMMEFSDDYPSKPPKCRFVPPLFHPNVYPSGT
ICLSLLPFIWWETKMDVKMQRCRVVIEDMAILSVLPAAILHVYVSYVMNG
LTVLHCTVALSTRDRVGGQPSR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD
IPR027230	Ubc9
IPR023313	UBQ-conjugating_AS