mRNA_H-paniculata_contig25588.6966.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25588.6966.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 374 bits (960), Expect = 6.840e-112 Identity = 225/572 (39.34%), Postives = 317/572 (55.42%), Query Frame = 1
Query: 22 LLDSGAGVTALSEDILHRLQQQWPGRELSRPYTGMVKAKVADGRELDLTEQTVPLHIILASSWGDLRVT-LPFMIVPGKSGVVILGGLTLRKQLDIDVMQQLK------------------------------------------ATVER--RRGGNPIEFKAQEQGYKKEESLVRGRSVEVNVETLTE-GLPPNGVTELIKSVMNSHFHAFRRALSGDPPADVEPLRVHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANPQARFSSVAMAVPKKD----TYRMVADYRPVNNLIAPSAMPMPHLEGIERGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGLYTPTRVPQGVLNATSYFPGTMGHVLAGLLGKFCEVWVDDIGIWAGTWQELMRRLRAVLEQLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVFHDPERVQGLVSMRRPNTLGELMQFLQASNWMRTSVPELAVGVEPLREMLET-LLNNTRRTRRAADKIVITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVTQV 1584
+LDSGAG+TA+S + +LQ++ P + + K +GR + +TE+T P+ + + + WG + + F ++PG VVI+G TL K L IDV + + A VER RG + + A EE R +++ V++ + GL P G+ L + V++ F+ FRR + GDPPA+V P+ V + A+ +AR R + DK +WL L G+V+ N QA ++S M PK+ TYR V D+R VN I S PMP LE + ++ A+ + +LD+LQGYW MPL P+AQEIFTM+ GLY+P RVPQGVLNATSY+ GTM +L L C VWVDDI W T ++L+ L +L + + G++ AAHK + ++WCGK+YS + HD +R+ GL ++RRP T GELMQFLQA NW+RTS+P ++ V PLRE LE + N RT+R A I WT +WE A + V+ AV LYHP A ++VL+FPDASD WGS VTQV
Sbjct: 431 ILDSGAGLTAMSASVAQKLQKKCPDVSVVVSTDHPHQVKTVEGRLVTVTEKTCPVRMTIHTQWGPVVLDPRAFAVMPGTDDVVIIGDPTLTK-LGIDVYEAMAQHALKERDMEVRGVDTPGFHEARRISVSVEAFTQRAAPDPPDAAVERLVARGPDMVMTPA-------EEEAGRADALDRAVDSAADAGLSPWGLDRL-RQVVDRRFNVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQV 990
BLAST of mRNA_H-paniculata_contig25588.6966.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 374 bits (959), Expect = 1.440e-111 Identity = 237/568 (41.73%), Postives = 312/568 (54.93%), Query Frame = 1
Query: 4 AVSVDILLDSGAGVTALSEDILHRLQQQWPGRELSRPYTGMVKAKVADGRELDLTEQTVPLHIILASSWGDLRVT-LPFMIVPGKSGVVILGGLTLRKQLDIDVMQQLKATVERRRGGNPIEFKAQEQGYK-------------------------------------KEESLVRGRSVEVNVETLTE-GLPPNGVTELIKSVMNSHFHAFRRALS-GDPPADVEPLRVHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANPQARFSSVAMAVPKKDTYRMVADYRPVNNLIAPSAMPMPHLEGIERGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGLYTPTRVPQGVLNATSYFPGTMGHVLAGLLGKFCEVWVDDIGIWAGTWQELMRRLRAVLEQLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVFHDPERVQGLVSMRRPNTLGELMQFLQASNWMRTSVPELAVGVEPLREMLET-LLNNTRRTRRAADKIVITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVTQV 1584
A+ +LD G+G+T +S I RLQ +P ++ K KVADGR L +T++T P+ I L +SWG + V L F ++PG VVILG TL K L IDV + L A R +E A +Q + +EE+ R S++ V + GL V L + +++ ++AFRR L GDPPA+VEPLRV + AR +ARPR + K WL A G+VF N QA ++S AMA PKK YR+V+D+R N + MP+ E ++ A + +LDLLQ YWQ PL P+AQEIFT+ T GLYTP RVPQG+LNATSYF T+ +L GL C VWVDD+ W +L+ L +L++L+ G+Y AAHK F + WCGK+YS V HDPER+ GL +MRRP T GELMQFLQA NW+RTS+P +A V PLR LE L+ RT+R A+ I T AW A + V+ AV L HP +VL+FPDASD WGS +TQV
Sbjct: 533 AIDAVAILDPGSGLTTMSAGIASRLQAAFPDVQVVGGMQNPGKLKVADGRVLAVTQKTCPVQIALHTSWGLVSVDPLSFAVMPGNDEVVILGNPTL-KALGIDVYESLGACARSRASVAGVETAAYKQCRRVTLAVDALQQREGPEQVEPDPAVERLVARGPDMDMSPEEEASARSASLDSAVSSAAAAGLEEPHVGRL-RGIISERWNAFRRGLRHGDPPANVEPLRVTLKPGARPVKARPRVYNPIKTAWL-------AGLGLVFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLTQV 1088
BLAST of mRNA_H-paniculata_contig25588.6966.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE) HSP 1 Score: 269 bits (688), Expect = 2.890e-75 Identity = 165/384 (42.97%), Postives = 213/384 (55.47%), Query Frame = 1
Query: 487 KSVMNSHFHAFRRALSGDPPADV-----------EPLRVHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANPQARFSSVAMAVPK------KDTYRMVADYRPVNNLIAPSAMPMPHLEGIERGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGLYTPTRVPQGVLNATSYFPGTMGHVLAGLLGKFCEVWVDDIGIWAGTWQELMRRLRAVLEQLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVFHDPERVQGLVSMRRPNTLGELMQFLQASNWMRTSVPELAVGVEPLREMLET-LLNNTRRTRRAADKIVITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVTQV 1584
K M+ H A RALS P V EPL++ + + + + R S KA WL L GMV QA ++S AM VPK + YR+ DY N + +P E + GA+ F LDLLQGYWQMPL A+EIF++ T +GL+ PTRVPQ VLNAT YF M +L GL C VWVDD W +L+ L +L +LQ GI+AAAHK F ++RWCGK+YSG V DPER+QGL MRRP T G+LMQFLQA W+RTS+ LA +EP+R +LE + + R+T+ A I WT AW +A + V+ AV L HP+ +VL+FPDAS+ WGS +TQV
Sbjct: 361 KEPMDVHDEAVTRALSRGPNMSVPPEEEEVQRKVEPLKMTLKPGVQHVQEKARVYSPAKATWLSGCMAALVAMGMVVKTIQAVWASPAMTVPKPGRVGREGEYRLGNDYLRANLQCEKVPIVVPSQEVQVSMLQGATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGLN---CAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPKDGFAVLMFPDASEEHWGSFLTQV 741
BLAST of mRNA_H-paniculata_contig25588.6966.1 vs. uniprot
Match: A0A6A3GM82_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GM82_9STRA) HSP 1 Score: 240 bits (612), Expect = 5.460e-70 Identity = 143/388 (36.86%), Postives = 206/388 (53.09%), Query Frame = 1
Query: 451 EGLPPNGVTELIKSVMNSHFHAFRRALSGDPPADVEPLRVHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANPQARFSSVAMAVPKKDTY-------RMVADYRPVNNLIAPSAMPMPHLEGIERGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGLYTPTRVPQGVLNATSYFPGTMGHVLAGLLGKFCEVWVDDIGIWAGTWQELMRRLRAVLEQLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVFHDPERVQGLVSMRRPNTLGELMQFLQASNWMRTSVPE---LAVGVEPLREMLETLLNNTRRTRRAADKIVITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVTQV 1584
+GL GV L + ++ +FR DPP V PL+V V +A+ +A+PR S D +LD+H KL + G+VF N ++R++S V KK+ RM D R VN PMP LE + + GA V LD +GYWQ+PL +QE+FT +T +G+YTPTRVP G +A +Y G + + LLG W+DDI +A + EL++ L VL + +V G+ A K + F E++WCGK S A V H +RVQGLV M+ P T G+L QFL A NWMR S+PE L G+ + E + ++ + A K + + W + + A + + VPL HP V ++ DAS WG+ TQ+
Sbjct: 47 KGLSAKGVKRL-REILLRRQDSFRLEFGCDPPVKVAPLQVRVTVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTESMPWPMPVLEVVLGALEGAKVVFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILAWLDDILGYAESEDELLQLLDQVLARCEVYGLKLHAKKCEFFEIEVKWCGKTVSAAGVRHCSDRVQGLVEMQPPQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLYAVLEEAMKAAGSRKKVKLA--KFPLDQIGWGDPQLADLAAVKAALLKMVPLAHPSPTAEVCLYTDASQDSWGAVATQL 431
BLAST of mRNA_H-paniculata_contig25588.6966.1 vs. uniprot
Match: A0A6A3FJD6_9STRA (Reverse transcriptase domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJD6_9STRA) HSP 1 Score: 244 bits (623), Expect = 1.280e-69 Identity = 142/385 (36.88%), Postives = 206/385 (53.51%), Query Frame = 1
Query: 454 GLPPNGVTELIKSVMNSHFHAFRRALSGDPPADVEPLRVHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANPQARFSSVAMAVPKKDTY-------RMVADYRPVNNLIAPSAMPMPHLEGIERGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGLYTPTRVPQGVLNATSYFPGTMGHVLAGLLGKFCEVWVDDIGIWAGTWQELMRRLRAVLEQLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVFHDPERVQGLVSMRRPNTLGELMQFLQASNWMRTSVPELAVGVEPLREMLETLLN-NTRRTRRAADKIVITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVTQV 1584
GL +G +L ++VM + FR DPP V P++V + DAR RA+PR S + +LD+H L G+V+ N ++R++S V K++ RM D VN P + PMP L+ + G+ GA VF LD L+GYWQ+PL P +QE+++ VT +G+YTPTRVP G +A +Y G + + L+G W+DDI +A L+ L VL + G+ A K + F E++WCG++ S V H PERVQGLV M P T G+L QFL A NWMR S+PE L + LE ++ R + KI + W ++ A++E + V L HP V ++ DAS FWG+ V+Q+
Sbjct: 223 GLTLDGRAKL-RAVMRVRVNNFRLEFGNDPPVRVAPMQVRLKDDARPVRAQPRRYSPNDRAFLDRHTAALLAHGLVYKNHRSRWASAPRIVRKREQDVDPTADPRMTIDTWSVNERTEPMSWPMPVLDVVLGGLEGARVFFVLDWLRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCHGVVEEIFGDLVGDGILAWLDDILGYAENESALLELLDKVLSRCDAYGLKLHAKKCQFFATEVKWCGRVISADGVKHCPERVQGLVDMPPPRTAGDLQQFLCAVNWMRRSIPEYTRITANLYDALERAAKISSSRNKNVLAKIRLDDAGWGDKEIASFEKIRGALLRMVSLAHPSPTAEVALYTDASQDFWGAMVSQL 606
BLAST of mRNA_H-paniculata_contig25588.6966.1 vs. uniprot
Match: A0A0G4J790_PLABS (Reverse transcriptase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J790_PLABS) HSP 1 Score: 245 bits (626), Expect = 1.230e-68 Identity = 133/380 (35.00%), Postives = 211/380 (55.53%), Query Frame = 1
Query: 454 GLPPNGVTELIKSVMNSHFHAFRRALSGDPPADVEPLRVHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANPQARFSSVAMAVPKKDT--YRMVADYRPVNNLIAPSAMPMPHLEGIERGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGLYTPTRVPQGVLNATSYFPGTMGHVLAGLLGKFCEVWVDDIGIWAGTWQELMRRLRAVLEQLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVFHDPERVQGLVSMRRPNTLGELMQFLQASNWMRTSVPELAVGVEPLREMLETLLNNTRRTRRAADKIVITRG-DWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVTQV 1584
G+ GV L + ++ H + FR L D P ++EP+ + DA R RPR + + E+LD+ L + +++ N +R++S + V K + YR+ D R VN+ P+A PMP++E R +AG + F T+D +G+W MP+ + QEIF+ +T G+YTPTR QG N+ F +G + + +W+DD+ +A T L+ +L VLE+ + R + K LF RE++WCG+IYS + HDPER++ L SM RPNT EL QF+ A+NWMRTSVP A + PL+E+ + +R + ++ + WT+ + A+E + + V L +P++D +F DASD W +TQ+
Sbjct: 263 GMSRQGVARL-RLILRRHVNEFRTQLGQDGPVNIEPMITKLQPDATPYRCRPRSYNPKQKEFLDEMIKMLLENNLIYLNMNSRWASPVLVVKKPNGKGYRLCVDLRQVNSRTVPTAWPMPNIEAASRKLAGMTCFFTIDAHKGFWLMPIAKECQEIFSFMTDDGVYTPTRSIQGATNSALQFQARIGKIFDDMKDHLL-IWIDDLLGFAKTEDILLHQLARVLERARERNLKFNPDKCVLFARELKWCGRIYSRDGIRHDPERIEALTSMPRPNTFKELQQFIWAANWMRTSVPGYAYIIAPLQELTDKANEEMKRIQSSSPSSIRLHDLGWTDRHSKAFEDIRFALIQHVQLAYPKSDHQTCLFTDASDLAWAPVITQI 640
BLAST of mRNA_H-paniculata_contig25588.6966.1 vs. uniprot
Match: A0A6G0WDP6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDP6_9STRA) HSP 1 Score: 248 bits (633), Expect = 4.920e-68 Identity = 143/399 (35.84%), Postives = 223/399 (55.89%), Query Frame = 1
Query: 397 EESLVRGRSVEVNVETLTEGLPPNGVTELIKSVMNSHFHAFRRALSGDPPADVEPLRVHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANPQARFSSVAMAV--PKKDTYRMVADYRPVNNLIAPSAMPMPHLEGIERGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGLYTPTRVPQGVLNATSYFPGTMGHVLAGLLGKFCEVWVDDIGIWAGTWQELMRRLRAVLEQLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVFHDPERVQGLVSMRRPNTLGELMQFLQASNWMRTSVPELAVGVEPLREMLETLLNNTR-RTRRAADKIVITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVTQV 1584
+++ VR + E E G + EL K ++ + FR L DPP VEPLRV + ADA+ R + R S+++ E++ K+ +L AG+ + NP++++ S + V P+ + +RM D RPVN PMP LE I + GA VF TLD +GYWQ L P +QE+F+ +T G+YTPTRV G ++ +Y ++ + A L + ++W+DD+ ++ T + L+ L VL+ + RG+ K + ++ E RWCG+I SG V HDPER++ L ++ P T +L QF+ A NWMR S+P V V+PL + +E + RTR+ KI ++ W + + + +AV L HP++D+ V +F DASD WG VTQ+
Sbjct: 611 DQAAVRAKLKEKVGECRVAGCDDSYAVELGKLLVK-YEDVFRLKLGRDPPVKVEPLRVTLKADAKPVRCKARRNSKEQREFMAKYVDELQAAGLCYRNPRSKWCSAPLIVKKPEANEFRMTVDVRPVNAQTERILWPMPMLEVILDHLCGAQVFFTLDFFKGYWQFALHPDSQEMFSFLTDIGVYTPTRVLMGGTDSVAYCQSSVQEMFADELYRCLQIWLDDLLGYSKTKEGLLAALERVLKICEFRGLKLNPKKCRFYQTEARWCGRIVSGDGVKHDPERIKVLQDLKVPVTGQDLQQFICAMNWMRMSIPRYNVVVKPLTDPMEKIYALAGGRTRQKVAKIRLSEVGWNASHVDCLTSCKKALGQAVTLAHPKSDKLVCVFADASDLHWGGVVTQI 1008
BLAST of mRNA_H-paniculata_contig25588.6966.1 vs. uniprot
Match: A0A6G0XEE8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XEE8_9STRA) HSP 1 Score: 248 bits (633), Expect = 6.600e-68 Identity = 143/397 (36.02%), Postives = 220/397 (55.42%), Query Frame = 1
Query: 403 SLVRGRSVEVNVETLTEGLPPNGVTELIKSVMNSHFHAFRRALSGDPPADVEPLRVHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANPQARFSSVAMAV--PKKDTYRMVADYRPVNNLIAPSAMPMPHLEGIERGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGLYTPTRVPQGVLNATSYFPGTMGHVLAGLLGKFCEVWVDDIGIWAGTWQELMRRLRAVLEQLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVFHDPERVQGLVSMRRPNTLGELMQFLQASNWMRTSVPELAVGVEPLREMLETLLNNTR-RTRRAADKIVITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVTQV 1584
+ VR + E E G + EL K ++ + FR L DPP V PLRV + ADA+ R + R S+++ E++ KH +L AG+ + NP++++ S + V P+ + +RM D RPVN PMP LE I + GA VF TLD +GYWQ L P +QE+F+ +T GLYTPTRV G ++ +Y ++ + A L + +W++D+ ++ T + L+ L VL+ + R + K + ++ E RWCG+I SG V HDPER++ L ++ P T +L QF+ A NWMR S+P V V+PL +++E + RTR+ KI ++ W T + + +AV L HP++D+ V +F DASD WG+ VTQ+
Sbjct: 663 AAVRAKLKEKVGECRAAGCDDSYAIELGKLLVK-YEDVFRLKLGRDPPVKVGPLRVTLKADAKPVRCKARRYSKEQREFMAKHVDELQAAGLCYRNPRSKWCSAPLIVKKPEANEFRMTVDVRPVNAQTERILWPMPMLEVILDHLCGAQVFFTLDFFKGYWQFALHPDSQEMFSFLTDIGLYTPTRVTMGGTDSVAYCQSSVQEMFADELYRCLLIWINDLLGYSKTKEGLLAALERVLKICEFRRLKLNPKKCRFYQTEARWCGRIVSGDGVKHDPERIKALQDLKVPVTGQDLQQFICAMNWMRMSIPRYNVVVKPLTDLMEKIYALAGGRTRQKVAKIKLSEAGWNASHVNCLTTCKKVLGQAVTLAHPKSDKLVCVFADASDLHWGAVVTQI 1058
BLAST of mRNA_H-paniculata_contig25588.6966.1 vs. uniprot
Match: A0A6A3Z230_9STRA (RNA-directed DNA polymerase n=12 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z230_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.070e-67 Identity = 180/574 (31.36%), Postives = 274/574 (47.74%), Query Frame = 1
Query: 19 ILLDSGAGVTALSEDILHRLQQQWPGRELS-RPYTGMVKAKVADGRELDLTEQTVPLHIILASSWGDLRV-TLPFMIVPGKSGVVILGGLTLRKQLDIDVMQQLKATVERRR-----------------GGNPIEFKAQEQGYKKEESLVRGR-SVEVN-VETLTEGLPPNGVTELIK-----------------------SVMNSHFHAFRRALSGDPPADVEPLRVHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANPQARFSSVAMAVPKKDTY-------RMVADYRPVNNLIAPSAMPMPHLEGIERGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGLYTPTRVPQGVLNATSYFPGTMGHVLAGLLGKFCEVWVDDIGIWAGTWQELMRRLRAVLEQLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVFHDPERVQGLVSMRRPNTLGELMQFLQASNWMRTSVPELAVGVEPLREMLETLLNNT-RRTRRAADKIVITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVTQV 1584
++LD+GA + ++ +L L Q G+ L P G+ + V G+E +T ++L +S G L + L F + + ++ G + + L + L VE R+ G P + Y + L SVE + T T + P +TE+I+ ++++ +FR DPP V P++VH+ A A RA+PR S E+LD+H L G+V+ N ++R++S V KK+ RM D R VN P PMP L+ + + GA F LD +GYWQ+PL P +QE+++ VT +G+YTPTRVP GV +A +Y G + + LLG W+DD I T + L+ L VL + + G+ A K F +++WCG+I S V H PERVQGLV M+RP T GEL QF+ A+NWMR S+PE + L E L+ + R + K+ + +W + A++E + + VPL HP V ++ DAS FWG+ VTQ+
Sbjct: 158 LMLDTGADTSLVARGVLEALTQM--GKVLRVNPVAGITLSPV--GKEKIMTRIVTFDEVVLTTSAGPLMLRNLSFYVEEDNGSMEVIVGRPIMRLLGYSTDKLL---VEARKVRPDWELGVAQSDNLEPGAAPAATPGMRRLYAEPPMLPDEEDSVERHETRTATPTMHPTNLTEVIQYLEKKVEIASEMGLTLDGQARLTTILHVRADSFRVDFGNDPPVRVAPMQVHLKAGAEPVRAQPRRYSPTDREFLDRHTRALLDHGLVYKNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRSVNEKTEPMPWPMPVLDVVIGELEGARFFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGVTDAVAYCQGVVEEIFGDLLGHCMLAWLDDNII---TEEALLDVLDQVLARCEQYGLKLHAKKCTFFSTKVKWCGRIISADGVTHCPERVQGLVEMQRPRTAGELQQFVCAANWMRQSLPEYSRISAALYEALDRVAQVVGSRKKNQLSKVRLEDVNWGDAEVASFEAVRTALLKMVPLAHPNPTMDVCLYTDASQDFWGAAVTQL 721
BLAST of mRNA_H-paniculata_contig25588.6966.1 vs. uniprot
Match: A0A6A4Z9B8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9B8_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.590e-67 Identity = 133/359 (37.05%), Postives = 204/359 (56.82%), Query Frame = 1
Query: 517 FRRALSGDPPADVEPLRVHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANPQARFSSVAMAV--PKKDTYRMVADYRPVNNLIAPSAMPMPHLEGIERGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGLYTPTRVPQGVLNATSYFPGTMGHVLAGLLGKFCEVWVDDIGIWAGTWQELMRRLRAVLEQLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVFHDPERVQGLVSMRRPNTLGELMQFLQASNWMRTSVPELAVGVEPLREMLETLLNNTR-RTRRAADKIVITRGDWTEERAAAWETATERVSEAVPLYHPRADRSVLIFPDASDSFWGSCVTQV 1584
FR +L DPP DV PLRV + ADA R + R S+++ +++ KH +L AG+ + NP++++ S + V P+ + +RM D RPVN PMP LE I +AGASVF TLD +GYWQ LD +QE+F+ +T G+YTPTRV G ++ +Y ++ + L + +W+DD+ + + + L+ L VL + RG+ K + F E RWCG+I S V HDPER++ L ++ P T +L QF+ A NWMR S+P+ V V+P+ ++LE++ TR+ ++V+ W E A + + + V L HP+ +R + +F DASD WG VTQ+
Sbjct: 729 FRLSLGRDPPVDVAPLRVTLKADAEPVRCKARRYSKEQRDFMAKHVEELQAAGLCYRNPRSKWCSAPLIVKKPEANDFRMTVDVRPVNAQTERIIWPMPMLEVILDHLAGASVFFTLDFFKGYWQFALDEASQEMFSFLTDTGVYTPTRVLMGGTDSVAYCQSSVQEMFQDELYRSLLIWLDDLLGYDKSKEGLLAALERVLAICESRGLKLNPKKCRFFETEARWCGRILSSEGVKHDPERIKALQDLKMPVTGQDLQQFICAMNWMRMSIPKYNVIVQPITDLLESVYKAAGGHTRQKVAEVVLADVGWNAEHVACLTSCKDALGRVVTLAHPKPERLICVFADASDLHWGGVVTQI 1087 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25588.6966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25588.6966.1 >prot_H-paniculata_contig25588.6966.1 ID=prot_H-paniculata_contig25588.6966.1|Name=mRNA_H-paniculata_contig25588.6966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=528bp GAVSVDILLDSGAGVTALSEDILHRLQQQWPGRELSRPYTGMVKAKVADGback to top mRNA from alignment at H-paniculata_contig25588:913..2646+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25588.6966.1 ID=mRNA_H-paniculata_contig25588.6966.1|Name=mRNA_H-paniculata_contig25588.6966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1734bp|location=Sequence derived from alignment at H-paniculata_contig25588:913..2646+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25588:913..2646+ >mRNA_H-paniculata_contig25588.6966.1 ID=mRNA_H-paniculata_contig25588.6966.1|Name=mRNA_H-paniculata_contig25588.6966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3168bp|location=Sequence derived from alignment at H-paniculata_contig25588:913..2646+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |