mRNA_H-paniculata_contig2557.6960.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2557.6960.1
Unique NamemRNA_H-paniculata_contig2557.6960.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2557.6960.1 vs. uniprot
Match: D8LMM7_ECTSI (Phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMM7_ECTSI)

HSP 1 Score: 469 bits (1207), Expect = 6.810e-157
Identity = 233/251 (92.83%), Postives = 242/251 (96.41%), Query Frame = 1
Query:    1 SIHLNKVMKFTMCSVDHAICVSNTCRENLVIRATLPPEKISTIPNAIDPSKFTPDPAARFPKGTINVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEETREKSQLHDRIEMLGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEILPHSMIKFAEPTVGDLVDALADAIPLARKVVPSDFHVKVRGMYSWADVAERTETAYERALKAPPPSLVRRFQA 753
            SIHLNK+MKFTMCSVDHAICVSNTCRENLV+RATLPPEKISTIPNAIDPSKFTPDP+ARFPKGTINVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEE REKSQLHDR+E+LGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPE+LP  MIKFAEPTV DL DAL+DAIPLARK VPS+FH KVR MYSWADVAERTE AYERALKAPPPSLVRRFQ+
Sbjct:  135 SIHLNKLMKFTMCSVDHAICVSNTCRENLVVRATLPPEKISTIPNAIDPSKFTPDPSARFPKGTINVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEEMREKSQLHDRVEILGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEVLPGPMIKFAEPTVEDLTDALSDAIPLARKAVPSEFHAKVRDMYSWADVAERTERAYERALKAPPPSLVRRFQS 385          
BLAST of mRNA_H-paniculata_contig2557.6960.1 vs. uniprot
Match: A0A7S2DRR2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRR2_9STRA)

HSP 1 Score: 410 bits (1053), Expect = 4.110e-134
Identity = 198/293 (67.58%), Postives = 239/293 (81.57%), Query Frame = 1
Query:    1 SIHLNKVMKFTMCSVDHAICVSNTCRENLVIRATLPPEKISTIPNAIDPSKFTPDPAARFPKGTINVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEETREKSQLHDRIEMLGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEILPHSMIKFAEPTVGDLVDALADAIPLARKVVPSDFHVKVRGMYSWADVAERTETAYERALKAPPPSLVRRFQAYRRVGVFGQAVCCFLAAMLHLLWRLLERIWPAEEIELAPEFP 879
            SIH+NKV++FT+  VD AICVSNTCRENLV+RA L P  +STIPNA+DP+KF PDP  RFP  TIN+V++SRLVYRKGIDL A V+ ++C+R+PN+HFIIGGDGPK+LLLEE REK QL DR+E+LGAVP+++VR+VLVRGHIFLNCSLTESFCIAILEAA CGL VVST VGGVPE+LP SMIKFA P V  LVDA+ DAI  A+K+VPSDFH +V  MYSWADVA RTE  Y R ++ P PSL +RF+ YR VG F   +CCF+ A LHL   +LE + PAE+ ++AP+FP
Sbjct:   20 SIHINKVLQFTLSDVDEAICVSNTCRENLVLRAGLHPGTVSTIPNAVDPTKFVPDPTKRFPSQTINIVMISRLVYRKGIDLAARVIPVVCQRFPNVHFIIGGDGPKKLLLEEMREKYQLDDRVELLGAVPYSQVRNVLVRGHIFLNCSLTESFCIAILEAACCGLVVVSTQVGGVPEVLPKSMIKFATPEVHSLVDAVGDAIASAKKIVPSDFHEQVNNMYSWADVALRTELVYARVVQLPTPSLTKRFRKYRTVGPFAGLICCFIVAALHLYLFVLEYMDPAEDTDMAPQFP 312          
BLAST of mRNA_H-paniculata_contig2557.6960.1 vs. uniprot
Match: A0A7S1GBW6_9STRA (Phosphatidylinositol N-acetylglucosaminyltransferase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBW6_9STRA)

HSP 1 Score: 383 bits (984), Expect = 1.630e-122
Identity = 187/288 (64.93%), Postives = 223/288 (77.43%), Query Frame = 1
Query:    1 SIHLNKVMKFTMCSVDHAICVSNTCRENLVIRATLPPEKISTIPNAIDPSKFTPDPAARFPKGTINVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEETREKSQLHDRIEMLGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEILPHSMIKFAEPTVGDLVDALADAIPLARKVVPSDFHVKVRGMYSWADVAERTETAYERALKAPPPSLVRRFQAYRRVGVFGQAVCCFLAAMLHLLWRLLERIWPAEEIEL 864
            SI+LNKV+KFT+  VDH I VS+TCRENLV+RA+L P K+S IPNA+DPS+F PDP AR P  TINVV++SRLVYRKGIDL A V+ I+  R+P++HFIIGGDGPKRLLLEE REK QLHDR+E+LGAVPHA+VR VLVRGH+FLNCSLTESFCIAILEAA CGL+VVST VGGVPE+LP  MIKFAEP+   L +AL+ AI   R V P DFH  VR MYSW  V ERT   Y+  L+AP  +L+ R + Y   GV    +CC + A L L WRLLE +WPA ++E+
Sbjct:  173 SINLNKVLKFTLSDVDHVIAVSHTCRENLVLRASLAPTKVSAIPNAVDPSRFVPDPEARRPSNTINVVMVSRLVYRKGIDLAARVIPIVARRFPHVHFIIGGDGPKRLLLEEMREKHQLHDRVELLGAVPHAKVRDVLVRGHVFLNCSLTESFCIAILEAACCGLYVVSTRVGGVPEVLPEHMIKFAEPSAPALAEALSAAITSVRGVDPYDFHAAVRRMYSWQQVTERTTAVYDAILRAPRLTLMARLRLYNAAGVVFGPICCLIVAALFLYWRLLEWVWPAADVEV 460          
BLAST of mRNA_H-paniculata_contig2557.6960.1 vs. uniprot
Match: W7TP55_9STRA (Phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP55_9STRA)

HSP 1 Score: 377 bits (968), Expect = 2.870e-120
Identity = 187/301 (62.13%), Postives = 231/301 (76.74%), Query Frame = 1
Query:    1 SIHLNKVMKFTMCSVDHAICVSNTCRENLVIRATLPPEKISTIPNAIDPSKFTPDPAARFPKGT----INVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEETREKSQLHDRIEMLGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEILPHSMIKFAEPTVGDLVDALADAIPLARKVVPSDFHVKVRGMYSWADVAERTETAYERALKAPPPSLVRRFQAYRRVG-VFGQAVCCFLAAMLHLLWRLLERIWPAEEIELAPEFPSAR 888
            SIH+N+VM+F +  VDH ICVSNTCRENL +RA L P  +STIPNA+DP KFTPD        T    INVV++SRLVYRKGIDLVA V+ ++C R+P++HFI+GGDG K+LL+EE RE+ QL DR+EMLG VPH+ VR VLVRGHIFLNCSLTESFCIAILEAASCGLFVVST VGGVPE+LP SMIKFA+PTV  L  A+  A+PLA++V P++FH +VR MY+W +VA RTET Y    +A  P+L+ R + Y  VG      +CCF  ++++L WR++E IWP E+IELA EFPS R
Sbjct:  140 SIHINQVMRFILSDVDHCICVSNTCRENLALRARLHPILLSTIPNAVDPDKFTPDLGQHRRLSTGGDRINVVMISRLVYRKGIDLVARVIPMVCARFPHVHFIVGGDGNKKLLIEEMRERHQLQDRVEMLGRVPHSDVRDVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTCVGGVPEVLPPSMIKFADPTVESLAAAIEAALPLAKEVAPAEFHRRVRHMYNWMEVARRTETVYHHVREASTPTLMERLRRYNTVGGAVAGWLCCFAVSVMYLAWRVIEWIWPREDIELAHEFPSTR 440          
BLAST of mRNA_H-paniculata_contig2557.6960.1 vs. uniprot
Match: A0A4D9CR75_9STRA (Glycos_transf_1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CR75_9STRA)

HSP 1 Score: 366 bits (940), Expect = 3.640e-118
Identity = 182/294 (61.90%), Postives = 224/294 (76.19%), Query Frame = 1
Query:   22 MKFTMCSVDHAICVSNTCRENLVIRATLPPEKISTIPNAIDPSKFTPDPAARFPKGT----INVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEETREKSQLHDRIEMLGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEILPHSMIKFAEPTVGDLVDALADAIPLARKVVPSDFHVKVRGMYSWADVAERTETAYERALKAPPPSLVRRFQAYRRVG-VFGQAVCCFLAAMLHLLWRLLERIWPAEEIELAPEFPSAR 888
            M+F +  VDH ICVSNTCRENL +RA L P  +STIPNA+DP KFTPD        T    INVV++SRLVYRKGIDLVA V+ ++C R+P++HFI+GGDG K+LL+EE RE+ QL DR+EMLG VPH+ VR VLVRGHIFLNCSLTESFCIAILEAASCGLFVVST VGGVPE+LP SMIKFA+PTV  L  A+  A+PLA++V P++FH +VR MY+W +VA RTET Y    +A  P+L+ R + Y  VG      +CCF  ++++L WR++E IWP E+IELA EFPS R
Sbjct:    1 MRFILSDVDHCICVSNTCRENLALRARLHPILLSTIPNAVDPDKFTPDLGQHRRLSTGGDRINVVMISRLVYRKGIDLVARVIPMVCARFPHVHFIVGGDGNKKLLIEEMRERHQLQDRVEMLGRVPHSDVRDVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTCVGGVPEVLPPSMIKFADPTVESLAGAIEAALPLAKEVAPTEFHRRVRHMYNWMEVARRTETVYHHVREASTPTLMERLRRYNTVGGAVAGWLCCFAVSVMYLAWRVIEWIWPREDIELAHEFPSTR 294          
BLAST of mRNA_H-paniculata_contig2557.6960.1 vs. uniprot
Match: A0A482SJN3_9ARCH (Phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJN3_9ARCH)

HSP 1 Score: 369 bits (946), Expect = 7.030e-117
Identity = 175/291 (60.14%), Postives = 220/291 (75.60%), Query Frame = 1
Query:    1 SIHLNKVMKFTMCSVDHAICVSNTCRENLVIRATLPPEKISTIPNAIDPSKFTPDPAARFPKGTINVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEETREKSQLHDRIEMLGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEILPHSMIKFAEPTVGDLVDALADAIPLARKVVPSDFHVKVRGMYSWADVAERTETAYERALKAPPPSLVRRFQAYRRVGVFGQAVCCFLAAMLHLLWRLLERIWPAEEIELAPE 873
            SIH+NK+++ T+  VDH ICVSN+CRENL +RA L P  ISTIPNA+DP+KFTPDP+ R+P  TINVV++SRLVYRKGIDL+  V+ ++C R  N+HFIIGGDG K LLLEE REK QLHDR+E+LG+VP  +VR VLVRGHIFLNCSLTESFCIA+LEAASCGL+VVST VGGVPE+LP +MI FAEP    + DA+ +AI ++R+V P +FH +V+ MYSW +V  RTE  Y        PSL  R   Y   G+F   + C L  +LHLLWR+ E I PA+++E+ P+
Sbjct:  145 SIHINKMLQMTLSDVDHVICVSNSCRENLSLRARLHPSLISTIPNAVDPTKFTPDPSRRYPTNTINVVVLSRLVYRKGIDLLVKVIPLVCSRISNVHFIIGGDGNKLLLLEEMREKCQLHDRMELLGSVPQNKVRDVLVRGHIFLNCSLTESFCIALLEAASCGLYVVSTKVGGVPEVLPSAMISFAEPQAESIADAVINAISISRRVYPQEFHERVKSMYSWLEVCRRTELVYSNIAATRRPSLALRLVRYSSSGIFSGFIACVLVTLLHLLWRVCEYIDPAKDVEVCPD 435          
BLAST of mRNA_H-paniculata_contig2557.6960.1 vs. uniprot
Match: A0A8K1FFE3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFE3_PYTOL)

HSP 1 Score: 345 bits (884), Expect = 2.080e-107
Identity = 180/302 (59.60%), Postives = 223/302 (73.84%), Query Frame = 1
Query:    1 SIHLNKVMKFTMCSVDHAICVSNTCRENLVIRATLPPEKISTIPNAIDPSKFTP---DPAARFPKGTINVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEETREKSQLHDRIEMLGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEILPHSMIKFAEPTVGD-LVDALADAIPLARKVVPSDFHVKVRGMYSWADVAERTETAYERALKAPPPSLVRRFQAYRRVGVFGQAVCCFLAAMLHLLWRLLERIWPAEEIELAPEFPSARAA 894
            S+HLNKVMKF++ ++DHAICVS+TC+ENLV+RA+L P+ ISTIPNA+D SKFTP   +P+A     TINVVI+SRLVYRKGIDLV   ++I+C   PN++FIIGGDGPKRL+LEE REK +LHDR+ + GAVPHA VR VL +GHIFLN SLTESFCIAILEAA+CGLFVVST VGGVPE+LP  MI+FA  T  + L  A+ DA+P A KV   DFH +V  MY+W D+A RTE  YE+ +  P   L+ R Q Y  +G       C +AA+LHL   +LE   PA EIE A E+P + A+
Sbjct:  164 SVHLNKVMKFSLSTIDHAICVSHTCKENLVLRASLSPDMISTIPNAVDASKFTPPTTEPSAS--SSTINVVIISRLVYRKGIDLVGRAIQIVCAATPNVNFIIGGDGPKRLMLEEMREKHRLHDRVHLYGAVPHANVRDVLCQGHIFLNSSLTESFCIAILEAAACGLFVVSTRVGGVPEVLPPDMIEFAAETTPEALAQAVLDALPRAAKVNRQDFHDRVAKMYNWNDIARRTEDVYEKVMTRPAMPLLHRLQLYYGIGPIAGMFACVIAAVLHLYLCVLEAWKPAGEIEEALEWPRSSAS 463          
BLAST of mRNA_H-paniculata_contig2557.6960.1 vs. uniprot
Match: A0A5A8C4Y8_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C4Y8_CAFRO)

HSP 1 Score: 338 bits (867), Expect = 5.230e-106
Identity = 171/296 (57.77%), Postives = 211/296 (71.28%), Query Frame = 1
Query:    1 SIHLNKVMKFTMCSVDHAICVSNTCRENLVIRATLPPEKISTIPNAIDPSKFTPDPAARFPKGTINVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEETREKSQLHDRIEMLGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEILPHSMIKFAEPTVGDLVDALADAIPLARKVVPSDFHVKVRGMYSWADVAERTETAYERALKAPPPSLVRRFQAYRRVGVFGQAVCCFLAAMLHLLWRLLERIWPAEEIELAPEFPSAR 888
            S+ +NK+ K++M  VDH ICVS+TCRENLV+RA LPP + S IPNA+DP++FTPDP   +P+GTIN+V+MSRLVYRKGIDLV  V+  +C  YP + FIIGGDGPKRLLLEE RE+ QL DR+E+LGAV H+ VR VL RGHIFLNCSLTESFCIAILEAA CGLFVVST VGGVPE+LP  MI FAEP    LV+A+  AI    +V P+ FH +V   YSW DVA RT   Y+ A+ AP   L+ R +     G+    +   +AA + ++WR  E   P E IE+AP+    R
Sbjct:   82 SVCVNKMCKYSMADVDHCICVSHTCRENLVLRAALPPSRTSAIPNAVDPTRFTPDPGLVWPQGTINIVMMSRLVYRKGIDLVVDVIPRICREYPAVRFIIGGDGPKRLLLEEMRERHQLQDRVELLGAVQHSGVRDVLCRGHIFLNCSLTESFCIAILEAACCGLFVVSTRVGGVPEVLPSRMIAFAEPDPESLVEAVRRAISRLSEVDPAGFHDEVATRYSWHDVARRTSVVYDAAVAAPLTPLLERLRRLFSCGLAQGVIGLIMAAFVFVVWRWTEWAVPREGIEIAPDMTPGR 377          
BLAST of mRNA_H-paniculata_contig2557.6960.1 vs. uniprot
Match: A0A812PBV1_SYMMI (PIGA protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PBV1_SYMMI)

HSP 1 Score: 333 bits (854), Expect = 7.130e-105
Identity = 158/248 (63.71%), Postives = 199/248 (80.24%), Query Frame = 1
Query:    4 IHLNKVMKFTMCSVDHAICVSNTCRENLVIRATLPPEKISTIPNAIDPSKFTPDPAARFPKGTINVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEETREKSQLHDRIEMLGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEILPHSMIKFAEPTVGDLVDALADAIPLARKVVPSDFHVKVRGMYSWADVAERTETAYERALKAPPPSLVRRF 747
            IHLNK++KF +  +DHAICVSNTCRENLV+RA L P  +STIPNA+DP+KFTPDP+ R P  T+N+V++SRLVYRKGID+   ++  +C  +P +HFIIGGDGPK+LLLEE  E+ QLHDR+E+LG V H +VR VLVRGHIFLNCSLTESFCIA+LEAASCGLFVV+T VGGVPE+LP +MIKF EP+V DL  AL++A+ + R+VVP++ H ++  MYSW DV+ERTE  Y   + +  PSL  RF
Sbjct:   83 IHLNKMLKFILSDIDHAICVSNTCRENLVLRAQLHPSMVSTIPNAVDPTKFTPDPSLRSPAHTVNIVMLSRLVYRKGIDIAVKLIPRLCAEFPAVHFIIGGDGPKKLLLEEMLERHQLHDRVELLGVVSHDQVRDVLVRGHIFLNCSLTESFCIALLEAASCGLFVVTTKVGGVPEVLPLTMIKFTEPSVDDLFVALSEAVSMTRRVVPNELHQRIILMYSWMDVSERTERIYNDMVLSAFPSLASRF 330          
BLAST of mRNA_H-paniculata_contig2557.6960.1 vs. uniprot
Match: A0A7S0P9G2_CAFRO (Phosphatidylinositol N-acetylglucosaminyltransferase (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0P9G2_CAFRO)

HSP 1 Score: 338 bits (867), Expect = 2.650e-104
Identity = 171/296 (57.77%), Postives = 211/296 (71.28%), Query Frame = 1
Query:    1 SIHLNKVMKFTMCSVDHAICVSNTCRENLVIRATLPPEKISTIPNAIDPSKFTPDPAARFPKGTINVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKRLLLEETREKSQLHDRIEMLGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEILPHSMIKFAEPTVGDLVDALADAIPLARKVVPSDFHVKVRGMYSWADVAERTETAYERALKAPPPSLVRRFQAYRRVGVFGQAVCCFLAAMLHLLWRLLERIWPAEEIELAPEFPSAR 888
            S+ +NK+ K++M  VDH ICVS+TCRENLV+RA LPP + S IPNA+DP++FTPDP   +P+GTIN+V+MSRLVYRKGIDLV  V+  +C  YP + FIIGGDGPKRLLLEE RE+ QL DR+E+LGAV H+ VR VL RGHIFLNCSLTESFCIAILEAA CGLFVVST VGGVPE+LP  MI FAEP    LV+A+  AI    +V P+ FH +V   YSW DVA RT   Y+ A+ AP   L+ R +     G+    +   +AA + ++WR  E   P E IE+AP+    R
Sbjct:  192 SVCVNKMCKYSMADVDHCICVSHTCRENLVLRAALPPSRTSAIPNAVDPTRFTPDPGLVWPQGTINIVMMSRLVYRKGIDLVVDVIPRICREYPAVRFIIGGDGPKRLLLEEMRERHQLQDRVELLGAVQHSGVRDVLCRGHIFLNCSLTESFCIAILEAACCGLFVVSTRVGGVPEVLPSRMIAFAEPDPESLVEAVRRAISRLSEVDPAGFHDEVATRYSWHDVARRTSVVYDAAVAAPLTPLLERLRRLFSCGLAQGVIGLIMAAFVFVVWRWTEWAVPREGIEIAPDMTPGR 487          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2557.6960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMM7_ECTSI6.810e-15792.83Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
A0A7S2DRR2_9STRA4.110e-13467.58Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1GBW6_9STRA1.630e-12264.93Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
W7TP55_9STRA2.870e-12062.13Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
A0A4D9CR75_9STRA3.640e-11861.90Glycos_transf_1 domain-containing protein n=1 Tax=... [more]
A0A482SJN3_9ARCH7.030e-11760.14Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
A0A8K1FFE3_PYTOL2.080e-10759.60Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5A8C4Y8_CAFRO5.230e-10657.77Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A812PBV1_SYMMI7.130e-10563.71PIGA protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A7S0P9G2_CAFRO2.650e-10457.77Phosphatidylinositol N-acetylglucosaminyltransfera... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2557contigH-paniculata_contig2557:10867..20741 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score458.8
Seed ortholog evalue2.1e-126
Seed eggNOG ortholog2880.D8LMM7
Preferred namePIGA
KEGG koko:K03857
KEGG ReactionR05916
KEGG Pathwayko00563,ko01100,map00563,map01100
KEGG ModuleM00065
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000506,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009653,GO:0009826,GO:0009846,GO:0009856,GO:0009860,GO:0009893,GO:0009932,GO:0009987,GO:0010033,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016254,GO:0016740,GO:0016757,GO:0016758,GO:0017176,GO:0019222,GO:0019538,GO:0019637,GO:0022414,GO:0030154,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032989,GO:0032991,GO:0034097,GO:0034645,GO:0036211,GO:0040007,GO:0042157,GO:0042158,GO:0042175,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0048468,GO:0048518,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050789,GO:0050896,GO:0051704,GO:0051716,GO:0060560,GO:0065007,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0071840,GO:0090407,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903509,GO:1990234,GO:1990823,GO:1990830
EggNOG free text desc.phosphatidylinositol N-acetylglucosaminyltransferase activity
EggNOG OGsCOG0438@1,KOG1111@2759
Ec32 ortholog descriptionN-acetylglucosaminyl-phosphatidylinositol biosynthetic protein PigA, family GT4
Ec32 orthologEc-06_003950.2
EC2.4.1.198
COG Functional cat.M
CAZyGT4
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons6
Model size2214
Cds size960
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2557.6960.1prot_H-paniculata_contig2557.6960.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2557 12100..20720 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929755.6361399-UTR-H-paniculata_contig2557:10866..120991622929755.6361399-UTR-H-paniculata_contig2557:10866..12099Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2557 10867..12099 -
1691480997.322029-UTR-H-paniculata_contig2557:10866..120991691480997.322029-UTR-H-paniculata_contig2557:10866..12099Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2557 10867..12099 -
1622929755.8430483-UTR-H-paniculata_contig2557:20720..207411622929755.8430483-UTR-H-paniculata_contig2557:20720..20741Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2557 20721..20741 -
1691480997.3923783-UTR-H-paniculata_contig2557:20720..207411691480997.3923783-UTR-H-paniculata_contig2557:20720..20741Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2557 20721..20741 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929755.6497421-CDS-H-paniculata_contig2557:12099..121471622929755.6497421-CDS-H-paniculata_contig2557:12099..12147Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 12100..12147 -
1691480997.3380826-CDS-H-paniculata_contig2557:12099..121471691480997.3380826-CDS-H-paniculata_contig2557:12099..12147Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 12100..12147 -
1622929755.661757-CDS-H-paniculata_contig2557:14982..151651622929755.661757-CDS-H-paniculata_contig2557:14982..15165Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 14983..15165 -
1691480997.3492243-CDS-H-paniculata_contig2557:14982..151651691480997.3492243-CDS-H-paniculata_contig2557:14982..15165Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 14983..15165 -
1622929755.6789-CDS-H-paniculata_contig2557:15989..160911622929755.6789-CDS-H-paniculata_contig2557:15989..16091Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 15990..16091 -
1691480997.3572445-CDS-H-paniculata_contig2557:15989..160911691480997.3572445-CDS-H-paniculata_contig2557:15989..16091Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 15990..16091 -
1622929755.6918707-CDS-H-paniculata_contig2557:17309..174721622929755.6918707-CDS-H-paniculata_contig2557:17309..17472Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 17310..17472 -
1691480997.3676748-CDS-H-paniculata_contig2557:17309..174721691480997.3676748-CDS-H-paniculata_contig2557:17309..17472Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 17310..17472 -
1622929755.7033982-CDS-H-paniculata_contig2557:18889..191131622929755.7033982-CDS-H-paniculata_contig2557:18889..19113Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 18890..19113 -
1691480997.3757336-CDS-H-paniculata_contig2557:18889..191131691480997.3757336-CDS-H-paniculata_contig2557:18889..19113Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 18890..19113 -
1622929755.8267267-CDS-H-paniculata_contig2557:20480..207201622929755.8267267-CDS-H-paniculata_contig2557:20480..20720Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 20481..20720 -
1691480997.3842447-CDS-H-paniculata_contig2557:20480..207201691480997.3842447-CDS-H-paniculata_contig2557:20480..20720Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2557 20481..20720 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2557.6960.1

>prot_H-paniculata_contig2557.6960.1 ID=prot_H-paniculata_contig2557.6960.1|Name=mRNA_H-paniculata_contig2557.6960.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=320bp
MKFTMCSVDHAICVSNTCRENLVIRATLPPEKISTIPNAIDPSKFTPDPA
ARFPKGTINVVIMSRLVYRKGIDLVAPVVKIMCERYPNLHFIIGGDGPKR
LLLEETREKSQLHDRIEMLGAVPHARVRSVLVRGHIFLNCSLTESFCIAI
LEAASCGLFVVSTAVGGVPEILPHSMIKFAEPTVGDLVDALADAIPLARK
VVPSDFHVKVRGMYSWADVAERTETAYERALKAPPPSLVRRFQAYRRVGV
FGQAVCCFLAAMLHLLWRLLERIWPAEEIELAPEFPSARAASKPFEMSPW
VSPKGSVIRRDGSSISLQR*
back to top

mRNA from alignment at H-paniculata_contig2557:10867..20741-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2557.6960.1 ID=mRNA_H-paniculata_contig2557.6960.1|Name=mRNA_H-paniculata_contig2557.6960.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9875bp|location=Sequence derived from alignment at H-paniculata_contig2557:10867..20741- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCATCCATCTTAACAAGGTGATGAAGTTCACCATGTGTAGCGTCGACCA CGCCATCTGCGTGAGCAACACCTGCAGGGAAAACTTGGTCATTCGTGCCA CCCTACCGCCCGAGAAAATATCGACGATCCCTAACGCGATAGATCCGTCC AAATTTACGCCGGACCCCGCCGCGCGCTTTCCGAAGGGCACCATCAACGT CGTCATCATGAGCCGCTTGGTTTATCGCAAAGGGATCGATCTCGTCGCTC CAGTGGTGAAGGTATAAAAAGGCGGGCGGTGGGTGGCGGGGCGGGGGGGT GGCACGTAGTAGGAGAAAAGGCTAGAGCAATTTGAATTGTATTACTGTAA CAGTGACCGTTTTTTTTTCAAGGATTTTTGTTTATAGGGTGAAAATTCGA AAAATGCATGTCGGCTATTCATTAATAGTTTTCCTCAACAACATATGTCC AAACCATAAAATCGGGAAGCCTGGTGGTGTGTTTGTTATGTGCATGATGG AGGAGATGCATTCTACGATGAAATAGATGCACAAGAAGGCTTCAAGAGTG TCCAACATAATGCGACTAACCAATAGCCTAAAGACGTTCGAGAACGAGAA GATTGGACCTCAGGTATACCCACGACGAGGCCCATAAAATCAGTTCCTAA CTTGCAACAGGCACGGTACCGTGTTGCTCCTCAAAATGGTGATACGTACA GAAGGCATGTCATTTGCCTCACTCTCGAACTCGCACACGCACCTGTCTTG CATCAACTATCGAGCCTATACGCAGTACTTGCACGCTCCCGGGAAGTAAG GTGGGGATCAAGTTGAATGGTGTACAATGTGCGCATACCTCGGGTGAAGG TCATGACGATTTTTGGAACATGACCATGACAACACGAGAATAATTGGTGT TTTGCCAAAAGCTGTTCGAACCGATAGATAACACCAAGGAACGTCCTTCC CTGCCCCCCTTCGTGGGGTGTTCCATTCTAGAGGTCAAGTGCACCTCCGC GCCCGTTTCGCGAATTGTCTCTTTCGAAAGCGCAGGTCGATGGTACCGTG TACTACGACATAGTGGCCCCTGTTTTCCCCTCAGGTCGAAGGCAGCAGCA ATGGTAGGGAATAGAAAAAAGCCTGAGCAGGCATGCACCGTAAAACCCTT AGATTACGCACCGTATTCCCCATGTTGTCATGTCGTCTGCTGTGCTATTG TTAAAGTTGGTCCTTGGCAAGATGCGTGTGTGTGTTGTTGCGGTTATGGC ATCATCACCCCCCACTAGTTTGGTCATTTTGTGGATAATAACCAAGAAAT CTCCAGCAGGTTGAAGACGGCGACCATACCTCCATTTTTTTTCACGGTTT TTATCATGTTTTCTACCGACGGTAATTTATGCATGTCTGCTTGCACTTTT GACTAGCTCTTCGCTCTACGGTACTTCTTCCAAACCGTGTTCTCATAGTG CAGAGACCGTCCTGCTGGCAAAGCTGTCCTTGACAATTGACCCGTTGGTG ATCCTAATAAAGTTTGCTGATAACTGAAGTCTGAAGTCTGAAGTCAGCTG CTGCATAACCTACCTCAACATGGATGCAGAGGAGTTAATTGCTCCCCCCC CGACCCCGACCCCCACCCCGCGCCCCAGATCATGTGCGAGCGCTACCCCA ACCTGCATTTCATCATCGGCGGTGACGGGCCGAAACGACTGCTCCTGGAG GAAACGCGGGAGAAGAGCCAGCTGCATGACCGGATAGAGATGCTGGGCGC TGTGCCCCACGCGCGAGTGAGGAGCGTGCTTGTGCGGGGTCACATATTCC TTAACTGCAGCCTGACAGAGTCGTTCTGCATTGCCATACTGGAAGCTGCT AGGTACGTCGCCGAGTAATACAGGGCACGAGGCTCTTGGGGTCTACGTAG CGACACAGTCTTGAACAATGCTCAAGTGTGAAACTTGGAAAGGGGAAGGT GTGGGAGGAAAGTAGATACTCGTTGCGTGTTGACTCTTGTGTTCTCTTCC TTTTTATTGTTGGCAAACCACGAAACCGGTAATAACCTAAGCGATTCATG TTTATTCCTGGCTCTGTCATTTTTCCTCTCTTGTCTCTTTGTACCGTCTT GCCGCCGTGTGTGCACTGCATATAGCAGCCCCCTCTCCCTGCTTTATATA TATTCTTGCTTTTTTATCTTCGCCTGTTCCGGTGAGCAATACCTTTCAGT GGATGCGGCCGCACACATTCTCACTAGCTAAAATCCGGTACATCAGCCAG CAAACTCTTCGTGCCCTTCGTACTTTGTTCAGTGTGAGGAGAAGCAATCT AGCAACTCCATGCTCCCCCCTTACCCCCTTTAACCCTTGTGGCGCACAGT GCCGAGGGGACGGCAGACGAACCATGTCAAACGTATGGAAAGGAGAAATT GCTTCTGGGCTTACAAACAACGCATGAGAAATGCGGACCCACTGCTAGGT ACACAGTTAGTGTCATGATTTAGCACAGCCGACAGTCTGACCGTGTGAAG GACAGACAGCCAATAGGAAGAAAGATAAAGAGAGAGAAAGGTAGTCTATT GCTTTCAGCCATAGTCGTCTGACTCTCAGTATCGGGTTCTCATAGCACGG TAGCAGAATAGCACACGGTATCTCTTCACGGAACCAATCCCTTCATACCC TGCATCAGAGCACAGCAACATATGTCACCATGACGAGAAGTAGCCCTTAT TGGTTGACCGTTGTTGCGGTTCAGCGAAAATTTATAACGAGAATAACATA TTCACTGCTACGATGGTCCATTTGTGGTCCGTCTACGCATATTGATTGTA CTGGGGGTTTTCCAAATTTCGCCAATTCCGCGCAGTCCCTGCCCTAACAG CGCTGAACTGTCAACTCCACACATTCGGAATAATTTGGCGTAGCGTCGGA AGGGTAGTTAACCCTTCCAGCGCCGGTTTCCATCAAGCTTCTACCTCGAA AAATAGGAAAAAAGCCCTTTAAGGTTTTTTTACACATTGCTCACAATACA ATTATCACGGGGATAGCTCTAGAGAGCTAGCCGTACAGATAGTACAATAG ACAGCCTCGTAAGTAATTGTAGACGCGCGGACAGGAAGAGTTGGTATGGT TTTGCGCTCCGCACAACAGTCGATTGAAACAGTAAATAGCACAAAGCACG TGCTGAGTGACCCACTGCAGAGGGTGTGTGTGCCGTACCACACATACTCC CGAGTCCGCACTTCCATCTCCGCTGATTCGCACGACCCCTGCCCACGGTT GATTGATCTTTCGGTATAGCTGCGGTCTGTTCGTTGTCAGCACTGCCGTC GGGGGCGTCCCGGAGATTCTGCCGCACTCAATGATCAAGTTCGCCGAGCC TACGGTGGGAGATCTGGTCGACGCGCTGGCAGATGCAATCCCGTTGGCCC GTAAGGTCGTGCCGAGCGACTTTCACGTGAAGGTGTGGGGTTGATTGCGT GTGTATTCCCCTCAACAAGAAAACATTTTTTGGGGGGGGGTGGTGAGGAA GCCTTTCGTGTTAAATTGTACCGCAAAAAGAAGAGAGAAAAAATATACAA GTGTTCGGTGCCGGCGTACCCGTGACCGTAATCACTGATTGATCTGCATG AAGTACATGGTGAGGCATGGAGGCAGTCGGAACAAAGAAGACCCTGGTGG ATGAGAGCGTGGAACCGTTGAAACAAACCCGACGTGTCTTGCGTACAGGT GGCGAGAGAAAAACAAAGGGATACAGGTGTACGGGTGGAGCTTGTTCGTT TCCAGCGACGCGTTGTTTTGGGGGTTTGTCGCTATCCGCTTCGAGAAGCG ACGCGCGTGTTGTTTAAATTTTCTGTGATTATTTGCCAGAGTTTCCCCTC TCTCCCCCCCCCCAGTAAAAAAAATAGGGGACCCTCGCTCCAGCTGACGG TTGTAGCCGAGTGTGGGGGTAAAATACGAATGATCTCGATTCAGGGTGTT TTGGACTTTTCGTTTGCATAACTCATCAATCCCCAGCATGCCAACTAATT TGAGACCATTACTGCGGGAGCCATGACATACGTAATCCAGGTGAAATATA ACATAAAAAGCATGGATGGGGAACCACAGGGGGTCGATCCTCAAGTGGCC CGTTAGACTAACTGTTGTGGGAAAGGAAATTGGAATTTTCTCCTAGCCAA CAATCAAGATGTACGGGTCCCCAGGGCTCGAAAGTTGTGACTGGTTGCAA CAACTGGGTGCAAGCTTCGTTTTTTTTTTATTCGTCTTTTTTTGCGAGGA AACAGGGATAACTCGACTCACCGGACACAGATCGAGACAATCACGTTTGC ATCCCTTTCTCCAACTCTCTGAGATGAGGTGTGCCAAGTTTTAGACCAAG ATAGGAAACCTGTCATTCGCAGTGCTTTCTGCAGTGCGACAAATCATAAG CAGTGATTGGGTTTTACTCGATCATAATTTGACCTGAACTCTCATCCAGG CGAAGAACTGCGGTCACAGATGATTTAAAAAAAACGTAATCACCGTGGAA AATAGAGGCCTGCTGGAGAATTCTAGCCCCCCCCCCCCATAACAGTTGGC CTTAGCGGTAAGGAGACCCCTTTTTTGTTTAAGCCCGCCTCCTCTTCTTC TTTTTTTTCCTTTCCGGCTATCTGCGGCATATGTACATGTGCACAATCAG GTAAGAGGAATGTACAGCTGGGCGGACGTGGCAGAGCGCACTGAGACAGC ATACGAGAGGGCTCTCAAAGCCCCGCCACCTAGCCTCGTCCGAAGATTCC AGGTGCGGCCACGAATCGGTTTCACAGGTACCGGTTTCCGTCATTGGACG GCTTCTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTGTTGTTATTTGGAC GTTCTCTGGGCTTTCAGCAACGTAATAACGCCGGTTTTTTCTGCTGAGGT GTTGTTCTGTCGTGAGTTATTTTCATGATTTAGAGGAAGAGTGAATGATG ACATATTTTTCTTCATACTAAGACGCGCCGCGCACACGTCATTATATTCC ATCGTGCACCACGTGTGCTGCTGGCTCATTTTCGATTTCGTAATACGTTG TGGCGGCGGCTCAATATGTTGACGCCCTCATAAATCGTGGTTCGTTTGAA CGTGCTATTTTTTACATTTGCATTTTAGAGTAGAGCTGTAGAATAGCTAC TGGTGCCATGCTGGCGCCTGGCATCGTCAAGCGCACATGTCCCTATCTAC CTCTCTCTCCTTCACACCAATGTTGCGAAATAACTTGCTATGATCTCCGC GTGCGACATACGGTCATTAAGACAAAGTTTGAAAATTTGGTAAAACGTGG ATGTACGTAAGGTCGTTTTCACTCTTTGATTCCGTTGAAAAACCGGTTCC AATTGTCATGACTACTATCTTAACACGCTCGTGTACAGTAATCTTACAGT ATTTCCAACGGCCGTGATAATGTTTCACTTAACACACCAAAAAAATAATG CCTCCCCCCCCCCCGCCCCTCTCTCGGCAAATCCACCCATCCACCCACCC ACCCACCCACCCCACGACGATACGCCCCGCAATTCCCCAATCCTCCTCCA TTCCCCGGTCCTCCTCCGATCCCCAGGCCTATCGGCGGGTAGGTGTGTTT GGTCAAGCCGTATGTTGTTTTTTGGCGGCGATGCTCCACCTGCTCTGGAG ATTGCTCGAGCGAATATGGCCGGCCGAAGAAATCGAACTGGCGCCAGAAT TCCCTAGCGCACGGGCAGCGTCGAAGCCATTCGAGATGAGCCCATGGGTG TCGCCAAAGGTGCGCTCACATGGGAGATTATTTTGTTGCGGTGCGCATAG CGCTGAATGAGTGGGGGTGTACTTCCTCTGTCCCGTAAGTCTGCATCGTT ATGGTTATTTGTTAATATCTTCGTCAAATTTGAGATAAGATAAGACAAAT CTGAGCATATCTTGCGAAAGCCCACAAGTTCGGTTTGCACACACGTATCT CTAATATATATATGTCAATATAAAATAGTTGAAAAAATGGTATCTGAACT AATATCGTTTTTTCCAAAAGGCAGCTTTTTGAGAAACAGCAAAATCGACC AAAAACGACCAAAAATTATATCGTCTCAACAAAACCTCTGGTAAGCTCTG AATCAAAACAGTATTAAATAATGATCTATTCTGAGGTAGTTCAAATTTTC TGGTCTGAAGTGGTTCAAATGTCCTGGTCTGAGGTAGTTCGAACTAGAAT TCGGTAAGTCCTCGAAGTAGAGCGCTCCACGTGACGTTTTCGGCCCACTT TAGAATGACCACTCTGCGTCCTCGAGGTGCCTACCGCCCTCATATCCCTC ACGCTAGCTGCGGGCCAAGCACCGTCACCCACATGGTCATCACCAATAGT CCATCTTGCTCCCGGGGACCCCGCCGGCTCCGGGTAAACATGACGAACTG TGTGAGGAAGGCGGGAACGGCTTAGCCTTTCGCTACGCTTTCGCCCTCCC TCCCGGTAAACAAGGGCTCCCGAAAGGCTCTGAAACCGAGTCGGCAGGTG AGTTAGGGGTGAATATGAGCTACCCGAAAAAGTGTGGTCGCGCGCGCAGG AACAACTGAAGAACGGGAACACCGTTTCCCTGGAATCAGTGGCGAGAACC GGCCGGGCATCGGACTCTACACCAATGAAACACAAGGAAATTCGACAGAT GAACGCCAAAAATCGCACCTTGACCCTTGAGATAGCACGGGTAAAAGCAT GCCGCGCAAGCTAAACCAAGCAGCGAGGGAGTATCGAACTCGTCACACAG CCTGCGCAGTCTCCAGACCTCAACGTGAACGATTTGAGATTCTTCGCAAA CTTGAAAAGCAGGGTGTGGAGGGGGCGCTACAGTACGATAGACGACTTTG TAAAGGGGGTTGAACCAATCTACGACGAGTATGACGCGGATACTTTAGAG AGAGTATAACAGAGCCTCTTCAAAACGTATAATCAAGTGTTGAGAACGCT GGGGGGGGGACGATTTCAATGTTTAGTACACCGGGGTGAGGAAAAAGCAG CGTGAGGGGATTCTGGAGCAATTGTTCACGATAGGTGAAGACGCTTTCGG CGCGGCGCTGAATTGGTGGATCGATGGAGAGGACGGGAGTTAATGATATC GCATTTGGTGTAGTAGATGCCAAGGAATCGAACGCGAAAAGGTGTTTTTT CCATGGGAGGTCTCGTTGAGACGATATCGCCAATTAACGGAGATTTTTCG CATTTTTTGTCGATTTCGCTGTTTCTCAAGAAGTAGCCAATTCGAAAAAT ACAAAAACAGTTCAGATATGATTTCTCAAGTATGTTGTATTGACGTTTGT TGTTTTTGGAGATATGTATGCGCAAGCCGAAGCTGTGGGCTTTCGAGTGA TATGGAAGTATTTTAAAAAATCTCAAACCTGACGAACATATTAACAGATA GCCATAACGATACAGGCTTACGAAACAGAGGAAGTATATATTTCAATACC CATCCAACCTGCAAGTCCGCCTGTCTTTTTATGCATTCAGTGTCAAATTT AGATGAGGCTTTGCGCTGCCTGGAAGATGGTGCTGCTTTAAGGGCCCTGT TTGACTTTCGACTGCCATGCTCAACGCCAAGTTTCGATGCCCATGTATAA ATATATATACATGCATGCGTTTACTATGTTTGCGGTAAAGCTTCAACCCT TGCCATGAATGACCGTGTTCTTATGTATGTAGCCCGTTGTCGTGATGGAA AGTAAGCCATTTTTGGAACAGTAAAATATTGAAGGTACGGAAACTTGGGC GCTAATAATGCCTCGGTTGTGGGGACGAAGTGTTGGCCCATGCATGACTC CACCGGACGAGAGAGGCCGTGGTGTTGAAAGCTTGATCATCTCTATAGAG TGCCTCGGTTCCCGGTGTGAAATGATCAAGACAAAAAGTGTAAAAAGGCT CTGCGAATTAGCCTATGCGGGGGAGCTAGTCTTCCATAGCCGAAGGAGCG TCGAATTCTCGCCATCTGTCCGCTACAAAGCTGGATACAAGTTGCGTAAG TCCCTCCTAACAGGTGCACCTCATATTTGCACAATTGCTCCTCAACTTAG TCGGTGCTTACAGTACTTGTTTAGGAGGACCAGCCTTAATCAATGATATA ACTTCGCTGGTATTTCCAAAGCAGTTAGTATATGAGCGTCAAAGTCATCA TTCAGCCAACTGTGGCAAGCGGATTGACTTACCAATGAGAACTCTGGTGG AGCCCCTTTCCTCTCGTAGTTTGGGCGGTTTGTGGTTAAATCAGTGAGCT TTACTGGAAGTAGTGCGCACAAGTCAAATTTGTTTTATGGTTCTTGCCGT GTGTTATGGTTGTGCATTTTGTTTCCCCACTATACTGTTATCAACCCCTC CTTAGTGATTTAGCATTGATAATTGTAAACAACTTGAGTTTAAGGTCAGC TGCATAAACTACAGTGGAATTACTAAGTGAGCTTCAAAGCTATATACTGA CTATGACAGTAACCTCCCGCCCCCCCCCTGCTTCATTATCCCGAGGACGC ATGGTCAATGGTCTGACAACTATGACACACAGAACATGACCCCGTCCCTC TCCCCCGTTGTCCGTTTCCCTCATGCCCCTAACGTGTCCGCTAGGGATCT GTGATAAGACGTGACGGCTCGTCTATCTCTCTTCAGCGGTGACACCACAG CGTCGTCCGCGGTGTAGCTTCGGTTTGTTTGCGGACAGCAACAGGAGGTA CTATCGTGGATGTGCAATTCATGTCCTTTTCGATATAGAAGTAGGCGTGC AGTCACGTTATAAATACAGACACATGGAGGGCCTTTGTAGATTGCTGATA GGGTGGTTTGGTGTGTTCCTTCGCAGGCGTGCGTGTTGATCTTCAGGTAA CGCGGTGTTCGTGTATTATTGATTTTTTGCGTGTCTGGGGCTGGTGTTAT GGTTTTGTTGGAAATGTTCTGTACATAGTTGCAGACATGAAGTGTTCGCA CCGCGTTTGTTAGTGGTGCGACGTCGCTCATTCGACATAACCAGAAAAAA AGTGGTCTGTCAGCTGGTCGTGAGGGAACTTGTTGGTTTGTGAGGGAGAA AAAGTGATGGATCCTTTCGAAACTAGCAAAAAAAAGTTAGCCCAATTTTT TTGGCAGCGTCGCCGTGGCCTACCTACTCATTTATGTTAGTGTGTTGTTC TTCTTGAGGAATACATCAACAGTTGGTGTTGTTCAACATACTCGGGCAAA AAGACCTTGTATTTTTAAAATACATGGGTCGGGTAGGGGAACGGTAGTGG GTTGAGTCTCGTCCCATGGCTTTCCGTCTCTAGACAGGAGCTGCCAAGTT GATGCATTTATATTTCTTGTTACGCGAGGGGCTCGTTACTTTTCATTTCT GAAACCACGACTTCAAAATGTCTTCGGCCCCACACAGAGCTGGGCTGTGT GGGGGAGTGTTCGACACAGCTGACTCGGTTATGACGTCTATTCCTCTGTC AAAGCCAGTTGCGCGGGAGATTTACCCCAGTTAAACTTACCGTTTTTTAG ACAATCATGCCCAGTACAAACCCTACACCGTACACGTACCTAATGTATTA TTGTCCACTGTACAAGGCGTGTACTGTCTGTTGTACCAGCCATTATCCTC TCCGTTCTGTGGGTTGATGTTACCACCGCGGGTCTGAGCCATCGGTCTCC TGGGATATGTCGGAGATGCAATAACGGAGAATTGGTCAGCACGCTACACT TGGGCAACTGCATACCCTGTGCTACATTTCTGTGGAAGGTTGTGGCTGCA GGGTGCTGGTAAGCTAATTTTCTAGCCACGTGGCCATGCAGCTTGACTAT AATGGGCTGCGCGTTTTTCTAATTAAAAGTGCATTTGGTCAACTTCAACA CAATTATGACAAACTATTTGGCCCC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2557:10867..20741-

>mRNA_H-paniculata_contig2557.6960.1 ID=mRNA_H-paniculata_contig2557.6960.1|Name=mRNA_H-paniculata_contig2557.6960.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at H-paniculata_contig2557:10867..20741- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGTTCACCATGTGTAGCGTCGACCACGCCATCTGCGTGAGCAACAC
CTGCAGGGAAAACTTGGTCATTCGTGCCACCCTACCGCCCGAGAAAATAT
CGACGATCCCTAACGCGATAGATCCGTCCAAATTTACGCCGGACCCCGCC
GCGCGCTTTCCGAAGGGCACCATCAACGTCGTCATCATGAGCCGCTTGGT
TTATCGCAAAGGGATCGATCTCGTCGCTCCAGTGGTGAAGATGAAGTTCA
CCATGTGTAGCGTCGACCACGCCATCTGCGTGAGCAACACCTGCAGGGAA
AACTTGGTCATTCGTGCCACCCTACCGCCCGAGAAAATATCGACGATCCC
TAACGCGATAGATCCGTCCAAATTTACGCCGGACCCCGCCGCGCGCTTTC
CGAAGGGCACCATCAACGTCGTCATCATGAGCCGCTTGGTTTATCGCAAA
GGGATCGATCTCGTCGCTCCAGTGGTGAAGATCATGTGCGAGCGCTACCC
CAACCTGCATTTCATCATCGGCGGTGACGGGCCGAAACGACTGCTCCTGG
AGGAAACGCGGGAGAAGAGCCAGCTGCATGACCGGATAGAGATGCTGGGC
GCTGTGCCCCACGCGCGAGTGAGGAGCGTGCTTGTGCGGGGTCACATATT
CCTTAACTGCAGCCTGACAGAGTCGTTCTGCATTGCCATACTGGAAGCTG
CTAGATCATGTGCGAGCGCTACCCCAACCTGCATTTCATCATCGGCGGTG
ACGGGCCGAAACGACTGCTCCTGGAGGAAACGCGGGAGAAGAGCCAGCTG
CATGACCGGATAGAGATGCTGGGCGCTGTGCCCCACGCGCGAGTGAGGAG
CGTGCTTGTGCGGGGTCACATATTCCTTAACTGCAGCCTGACAGAGTCGT
TCTGCATTGCCATACTGGAAGCTGCTAGCTGCGGTCTGTTCGTTGTCAGC
ACTGCCGTCGGGGGCGTCCCGGAGATTCTGCCGCACTCAATGATCAAGTT
CGCCGAGCCTACGGTGGGAGATCTGGTCGACGCGCTGGCAGATGCAATCC
CGTTGGCCCGTAAGGTCGTGCCGAGCGACTTTCACGTGAAGCTGCGGTCT
GTTCGTTGTCAGCACTGCCGTCGGGGGCGTCCCGGAGATTCTGCCGCACT
CAATGATCAAGTTCGCCGAGCCTACGGTGGGAGATCTGGTCGACGCGCTG
GCAGATGCAATCCCGTTGGCCCGTAAGGTCGTGCCGAGCGACTTTCACGT
GAAGGTAAGAGGAATGTACAGCTGGGCGGACGTGGCAGAGCGCACTGAGA
CAGCATACGAGAGGGCTCTCAAAGCCCCGCCACCTAGCCTCGTCCGAAGA
TTCCAGGTAAGAGGAATGTACAGCTGGGCGGACGTGGCAGAGCGCACTGA
GACAGCATACGAGAGGGCTCTCAAAGCCCCGCCACCTAGCCTCGTCCGAA
GATTCCAGGCCTATCGGCGGGTAGGTGTGTTTGGTCAAGCCGTATGTTGT
TTTTTGGCGGCGATGCTCCACCTGCTCTGGAGATTGCTCGAGCGAATATG
GCCGGCCGAAGAAATCGAACTGGCGCCAGAATTCCCTAGCGCACGGGCAG
CGTCGAAGCCATTCGAGATGAGCCCATGGGTGTCGCCAAAGGCCTATCGG
CGGGTAGGTGTGTTTGGTCAAGCCGTATGTTGTTTTTTGGCGGCGATGCT
CCACCTGCTCTGGAGATTGCTCGAGCGAATATGGCCGGCCGAAGAAATCG
AACTGGCGCCAGAATTCCCTAGCGCACGGGCAGCGTCGAAGCCATTCGAG
ATGAGCCCATGGGTGTCGCCAAAGGGATCTGTGATAAGACGTGACGGCTC
GTCTATCTCTCTTCAGCGGTGAGGATCTGTGATAAGACGTGACGGCTCGT
CTATCTCTCTTCAGCGGTGA
back to top